Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0255100 |
| Transcript ID | LotjaGi6g1v0255100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dehydration-induced 19-like protein; TAIR: AT5G49230.1 Drought-responsive family protein; Swiss-Prot: sp|Q9FJ17|DI197_ARATH Protein DEHYDRATION-INDUCED 19 homolog 7; TrEMBL-Plants: tr|A0A1J7GNN4|A0A1J7GNN4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0255100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:56777718..56780329) extracted from Lotus japonicus Gifu genome v1.2.
AACGAGTTACCGGAAAAGGTAGTTGGTAGGAAAGGGCATTTTGGGAATTGAACCAACATGCATTTCTCCTTCACAGACAC ACACACAACTCACTCTCTCTTCTCTTCTCTGCAGATTCTTCTTCTTCTTCTCTCTCTCTCTAGATTAGGGTTTCGTTCTC TCTCTAGAAATGGACTCCGATTCTTGGAACTCAACCCCTCGCCACTCAACCTCTTCTTCCCGCCGCTACCATTCCCGATC AGGTCAACTCAATTTTCAATTTCACTGAAATTATACATGGATCCATTGCTGAACCAATCGGTGGTTTTGCTTGCAGATCT GTATCTTGAAGACGCCGCCGCCTCCGATGATCTCAGGCCGGAGTATCTCTGCCCTTTCTGCGCCGAAGATTACGACGTCG TTTCGCTTTGTTGCCACATTGACGAACAACACCCTCTCCAAGCCAACACTGGGGTATCCCTCTTTTTCCCTTGCCTAAAG TTCAGATTTTAATCTTTTTTTTTAATATTATTAGTAGTTAGTTTAGTACTTTCCATTTTTCCAAAGTTACTCATTTTTCT GATTTTCTCACTACAATGAGAAATTGTGATTTGTGAATTTCTTGTGACTCACACTATTAGATTATCTTGCAGAAATTGTG AATTTATAGTGAGTTTGTGAGATTTGTTTGTCTTGCCGCTCGCGTTTTGATTAATTGAGTATTTCTCTGTATTTGTTGTT TATTGTCTACTGACTGTGATTACTGCATTGGTTGGATTACTCATGTTTTCAGGTGTGTCCGGTTTGCGCAAAAAAGGTTG GAATGGATCTTGTTACACATCTTACTACGCAACATGGGAGTTTTTTAAAAATATCCTTTTTGCTAATTGGTTTGTTTGGT TCTTGCTTTTGTTCGTGGTGTTTTCGTTTCTGCTTAAAATAATAGGTCCTTGCTCATATTGTATGCAGCAGCCAGATGGA TTCTTAGTTCTTACCCTTAATCTGCTGGGTGGGGATAAAATTCAATTTGTAGATAAAAGTTACATTCCACTTCAGTTAGT TGATAAGGTTAAATTGGTGTTTCAAATTGTTTGGTTCTCAGGAGGTTTTCAAACTCTGACTCTGCATATAGTATACAATA GAGATAGATGACAGGATTTTTCAGAAAATTGGTTTTAACACATCATTTCATTGCCCTCCTAACAAGACTCTGGAATAGTG AAATGTAATTCTAAAAATTTGTACATGCCCAAATCCCAATCAACATTATTAGTTGCTTCAATAGGATGGATTTTATTTCT ATGAGCCAAACAGAACACTCTAGCATAGTGAAATGATATGCCAAAAGTTTTTACATACCTACTCAACATTATGAACCGTT TATTTCATATCAATGAGCCAAACAGAACACTCAAGTGTGCTTTAACTTAGCAAGCGTTTGTCTAGTTCATTTGATATGAA GAATGGTGGTTATCTCCCTTGTTTGTATTAGTATAGTTATTTGATGCATTTGCCTAATGTGTTTCACAGTTGTGTGTAGT TATTCTAAATGATTTCAGCTTTGTTAACTGATATTCTCTGATGTCTCTGTTCTGTCGGTTTATGTCAAAAAAAGTTTTTG TGCTAGAACATTGACCCGTGTAACTATGTCATTACAAGTACCATACTTTTGGCTAAATGTTTTTGGATTGCTTAGAGATT TCAAAGATTTTCCATGACTAGAAATTACGTGCAGCGTAAAAGGAGGGTCAAGAAAGGAGGCCCTGGTTCAACATTGTCAA TGTTGAGAAAAGAGTTGCGAGAAGGAGCCCTGCAGTCCCTTCTTGGAGGGTCTTCGTACATGGCTTCCTCCAACTCCGAG CCTGATCCACTTTTGTCATCATTTATTTTTAACCCAGTACTAGCTGATGAATCTCTGAGTGCACGACCTTGCCCTTCCAT TGAAACTGCCTCAGTAAAAGAAAGCTCAAAAGATGATTTCTTGGAAAGGTAGGAATGTTGACAATGTTGTTGGATTAGGC TATGCTTTGTTTGGGAAATGGGAAAACTTTAGGCTGTTTTATGAGATACTTATTATGTTGGATTCATGTGGTGTTAGGCT CTGTATGTTGTTATGTTCGTGACCATTTTGTTTCGTAAAAGTTAATCGTGAGTGTCATTAAAAGTGATGCCATGGTTTCA TATGATTTGTACTGGTATATGATCATTTTAGCATATTGTCATATGTTTTACATCTGTTTCTTTTTTTAAATGTCATTTAT TGTAGTCTGACAATAGTTTCTGGTTACAGAAAACCTCAGAAGTTACAGATGTCAGACGAGGATCAAGCAGAGAAGGCTCG GAGGTTTGATTTTGTGCAAGGGCTGTTGATGTCCACCATTTTGGATGATAAATTATAACTGAACTCTAGCTGGCATGGCA TTATTGTATTAGGAGCAGTAGCAGGAGCTATAAGCTCGAGAGAGGAGTTAATTGAGAATGATACGAGTGGCTGTAGCAAG ATCGGATGAGTATGTAATGTGAGTATGTATTGTATATATGTTAATAAAATGCAAAGATGGAAGAACCTTTTTTATCCTGC TGAGTTCCTATCATAGTTCCAAATAACCAATAGGAATAAAATGCGTTTGACG
CDS sequence (LotjaGi6g1v0255100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACTCCGATTCTTGGAACTCAACCCCTCGCCACTCAACCTCTTCTTCCCGCCGCTACCATTCCCGATCAGATCTGTA TCTTGAAGACGCCGCCGCCTCCGATGATCTCAGGCCGGAGTATCTCTGCCCTTTCTGCGCCGAAGATTACGACGTCGTTT CGCTTTGTTGCCACATTGACGAACAACACCCTCTCCAAGCCAACACTGGGGTGTGTCCGGTTTGCGCAAAAAAGGTTGGA ATGGATCTTGTTACACATCTTACTACGCAACATGGGAGTTTTTTAAAAGTGCAGCGTAAAAGGAGGGTCAAGAAAGGAGG CCCTGGTTCAACATTGTCAATGTTGAGAAAAGAGTTGCGAGAAGGAGCCCTGCAGTCCCTTCTTGGAGGGTCTTCGTACA TGGCTTCCTCCAACTCCGAGCCTGATCCACTTTTGTCATCATTTATTTTTAACCCAGTACTAGCTGATGAATCTCTGAGT GCACGACCTTGCCCTTCCATTGAAACTGCCTCAGTAAAAGAAAGCTCAAAAGATGATTTCTTGGAAAGAAAACCTCAGAA GTTACAGATGTCAGACGAGGATCAAGCAGAGAAGGCTCGGAGGTTTGATTTTGTGCAAGGGCTGTTGATGTCCACCATTT TGGATGATAAATTATAA
Protein sequence (LotjaGi6g1v0255100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSDSWNSTPRHSTSSSRRYHSRSDLYLEDAAASDDLRPEYLCPFCAEDYDVVSLCCHIDEQHPLQANTGVCPVCAKKVG MDLVTHLTTQHGSFLKVQRKRRVKKGGPGSTLSMLRKELREGALQSLLGGSSYMASSNSEPDPLLSSFIFNPVLADESLS ARPCPSIETASVKESSKDDFLERKPQKLQMSDEDQAEKARRFDFVQGLLMSTILDDKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 218 | 218 | 2.1E-95 | – | |
| MobiDBLite | 1 | 15 | 15 | - | – | |
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 218 | 218 | 2.1E-95 | ||
| Pfam | 40 | 92 | 53 | 4.9E-20 | ||
| Pfam | 112 | 213 | 102 | 3.1E-33 | ||
| MobiDBLite | 170 | 196 | 27 | - | – | |
| MobiDBLite | 172 | 196 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0255100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…