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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0260200 |
| Transcript ID | LotjaGi6g1v0260200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Werner Syndrome-like exonuclease; TAIR: AT2G36110.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q14191|WRN_HUMAN Werner syndrome ATP-dependent helicase; TrEMBL-Plants: tr|A0A0S3S4L5|A0A0S3S4L5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0260200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57316961..57318251) extracted from Lotus japonicus Gifu genome v1.2.
CGCAGGAACCCAATCGCTCACACAACCATTTTATCGTGCTTCAGGCACGTACCAAAAAGCACTGCACATTTCAGCGCATT TTTCTCTCCCACTCCCCTCTCTCTCTCTCTCATCCTCATCCTCATCCTCATCCTCAATGGCCACAATCTACAATATCCCC TTGTACGGAACCAACGTAACCGTCACCGAAACCGCCACCGCCTCCGTCGTCAAAAAATGGATCAAGTCCATGCTCTTCTT CCACCGCCACCACTACAACAACGGCACCCTCATCGTCGGCCTCGGCGTCCAGTGGACTCCAATCGGCCAAAACCCTCCGG CGGACACCTTGCAGCTCTGCATCGGAAGCCGCATCCTCATCTTCCATCTCACTCACGCCGAGACCGCGCCTCTCGCGCTT TACCAGTTCCTCGAAAACCCTAGCATCTCCTTCGTCGGATTCTGGAACCACTCCGATCGGTCAAAGCTTGCTACCTCCTG GGCGAATTTGGAGATGTGCAGGGATCCTTATGATCTCAGATTCTACGCGGCTATGGAGTACGATGATCCGGAGTTGAAAA CTGCCTCCGTGCCGTGGATCGTGAAGAAGTGCCTCGGATTTGATGTTCAACAGAGGCCAGATGTTAGCATGAGTGATTGG AATCGAGAGTATCTTACCGCTGATCAGCTTCTCTATGCCTGCACCGATGCTTACTGTGCTTTTCTGATCGGAAAAGATCT CGAGGTTTGGGAATTTGATGATTAGCACTTAACAGGTAAAATCGATTCAACTCTGCTATCAATGAAAAATGCTTTGTTTA GATTTCAGAACCTTTCATAGCTCATAGTTTTGACTAGCTGGCGTGTAGTAGTAGTAGTAGTACTGCGTTTGAACTGTGCC TAGCTACTAGTATGTTTCACCGGTGGAGTAATATTGACGGTGACGGATATGTTGATCTTGCTTTGTTTGTTTCTAAATTT GCTCTGGTTTTTCATGAATGGTGATAGATTTACATTTTCAGTTTTACTAGTGATTCTGATTAAGCTCCTTTTTCCAAGCA TTTCATGTACCAATTTGTTATTGTCTGATTTTAGCTATGATTTCAATTGAAAGATTGAGAGCGATTTCAATCTTTGCCAA TGAATCAGAAATCAGAATAATAGGATCTTGAAAGTGAGTATTGAACACACTTAATGTGATTGACTACTTTTGGAGGTGAT TAATTGCAATGATGTTATTAGAGAATGCAATCAATTAGGGGACTTATTAGCAAATTAAGAATGTGTTAGGAAAAGTGATT TATGGGGTGGG
CDS sequence (LotjaGi6g1v0260200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACAATCTACAATATCCCCTTGTACGGAACCAACGTAACCGTCACCGAAACCGCCACCGCCTCCGTCGTCAAAAA ATGGATCAAGTCCATGCTCTTCTTCCACCGCCACCACTACAACAACGGCACCCTCATCGTCGGCCTCGGCGTCCAGTGGA CTCCAATCGGCCAAAACCCTCCGGCGGACACCTTGCAGCTCTGCATCGGAAGCCGCATCCTCATCTTCCATCTCACTCAC GCCGAGACCGCGCCTCTCGCGCTTTACCAGTTCCTCGAAAACCCTAGCATCTCCTTCGTCGGATTCTGGAACCACTCCGA TCGGTCAAAGCTTGCTACCTCCTGGGCGAATTTGGAGATGTGCAGGGATCCTTATGATCTCAGATTCTACGCGGCTATGG AGTACGATGATCCGGAGTTGAAAACTGCCTCCGTGCCGTGGATCGTGAAGAAGTGCCTCGGATTTGATGTTCAACAGAGG CCAGATGTTAGCATGAGTGATTGGAATCGAGAGTATCTTACCGCTGATCAGCTTCTCTATGCCTGCACCGATGCTTACTG TGCTTTTCTGATCGGAAAAGATCTCGAGGTTTGGGAATTTGATGATTAG
Protein sequence (LotjaGi6g1v0260200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATIYNIPLYGTNVTVTETATASVVKKWIKSMLFFHRHHYNNGTLIVGLGVQWTPIGQNPPADTLQLCIGSRILIFHLTH AETAPLALYQFLENPSISFVGFWNHSDRSKLATSWANLEMCRDPYDLRFYAAMEYDDPELKTASVPWIVKKCLGFDVQQR PDVSMSDWNREYLTADQLLYACTDAYCAFLIGKDLEVWEFDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 196 | 194 | 4.5E-64 | – | |
| PANTHER | 3 | 196 | 194 | 4.5E-64 | – | |
| Gene3D | 3 | 198 | 196 | 1.2E-28 | ||
| CDD | 19 | 196 | 178 | 2.1668E-40 | – | |
| SUPERFAMILY | 28 | 196 | 169 | 5.31E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi6g1v0260200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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