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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0268900 |
| Transcript ID | LotjaGi6g1v0268900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine zipper family protein, putative; TAIR: AT1G73360.1 homeodomain GLABROUS 11; Swiss-Prot: sp|Q9FX31|HDG11_ARATH Homeobox-leucine zipper protein HDG11; TrEMBL-Plants: tr|I1L0G6|I1L0G6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0268900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:58367631..58368866) extracted from Lotus japonicus Gifu genome v1.2.
AGTGATGATTAAACCACTAGAAAAGTGGAGGGTGATAAACCTTGCTCAACAAATGGTGAGCAACTTTTGTGGCTTTTTAA GCATGTCGAGTAAGTTGGACGAACCAGGAGAATTACTGAACGAGGATAATGCGATTAGGATCTGTGTTCAGAATATGACA AATAAGGCAGGCCAACCAAATGGCATGGTTATTGAAACTATTGCTTCCTCCTTTTGGCTTCCTATCCCTTCCCAAGTTCT CCATGAATTCTTCAAAGATCCATTTATGCGTCATAAGGTAATTCTCAATCTAATTAAACACCCATAATTTCATTAGAGAA TATCAATCTCTTGCTTGGTTAGTTGTAAAATAAATGTTAACTTTTCATTAGTTATAGAGTCATTAATTCATCCACTTGTT ATTTTCTTGTAGTGGGATCCTAGTTGCTATGGAAATCCTGTGCATGAGATTGTGTACATCTCAACTGAAACTCACCCTAA CAACTATATATCACTTCTCCAGGTACTTTAATTATTATCCATACGGCAATTCTACTGTGAACCATGTTAAGAACTCGTCT ACCCAGGAACCGTGTTTTTACTACTAACATTTTAGTAATGTTACTTACAATATGTTCCATGTGTTAGAATTAATTAAATT TGCCCCTTTTGACTTATGAGTTATTGCTTTTGCAATAAGCATGATTAAACTCATTTTAATCATTCATGTGTTGCAGCCTA TGAACTCTACTGCAAATGGTGATTATGTGATTCTGCAAGAAAGTTTCATGGGTCCCCTTGGATCATATATTGTATATAGT CCGGTTATCGTACCGGAGTTTCATATGGCTCTCAATGGAGGGCATCCATCAATGGTAATGCTTCTTCCATCAGGCATTGT CATCTCAGAAGATTACAAGAAACGTTCTTTGTGGAATGCTCCAAGCTGTAGTAATGGAAACAGAGGTTCAGTGTTGACCA TGACTTACCAAACACTTAAATGTGGTCCTGTTGCATTCAATAAAGAATCTGAGGAATCTGCTAGTTCACTCGTGATCTCA ACAATCCAAAACATCAAGGATGCTTTGATCAGTGGTTATGAGTCTGAATAATTATCTTTAGTTATGTTATTTGATTGAAG TTTAATTTTGCTAGCTACCATAGTAGTTGCTAGCAGGTACTGGAACATTATATTTATTTGCCATTATGCATTACAAACTT AATTTTGCTTATCTTCTGGATATTCATTTATGTCGG
CDS sequence (LotjaGi6g1v0268900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTAAACCACTAGAAAAGTGGAGGGTGATAAACCTTGCTCAACAAATGGTGAGCAACTTTTGTGGCTTTTTAAGCAT GTCGAGTAAGTTGGACGAACCAGGAGAATTACTGAACGAGGATAATGCGATTAGGATCTGTGTTCAGAATATGACAAATA AGGCAGGCCAACCAAATGGCATGGTTATTGAAACTATTGCTTCCTCCTTTTGGCTTCCTATCCCTTCCCAAGTTCTCCAT GAATTCTTCAAAGATCCATTTATGCGTCATAAGTGGGATCCTAGTTGCTATGGAAATCCTGTGCATGAGATTGTGTACAT CTCAACTGAAACTCACCCTAACAACTATATATCACTTCTCCAGCCTATGAACTCTACTGCAAATGGTGATTATGTGATTC TGCAAGAAAGTTTCATGGGTCCCCTTGGATCATATATTGTATATAGTCCGGTTATCGTACCGGAGTTTCATATGGCTCTC AATGGAGGGCATCCATCAATGGTAATGCTTCTTCCATCAGGCATTGTCATCTCAGAAGATTACAAGAAACGTTCTTTGTG GAATGCTCCAAGCTGTAGTAATGGAAACAGAGGTTCAGTGTTGACCATGACTTACCAAACACTTAAATGTGGTCCTGTTG CATTCAATAAAGAATCTGAGGAATCTGCTAGTTCACTCGTGATCTCAACAATCCAAAACATCAAGGATGCTTTGATCAGT GGTTATGAGTCTGAATAA
Protein sequence (LotjaGi6g1v0268900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIKPLEKWRVINLAQQMVSNFCGFLSMSSKLDEPGELLNEDNAIRICVQNMTNKAGQPNGMVIETIASSFWLPIPSQVLH EFFKDPFMRHKWDPSCYGNPVHEIVYISTETHPNNYISLLQPMNSTANGDYVILQESFMGPLGSYIVYSPVIVPEFHMAL NGGHPSMVMLLPSGIVISEDYKKRSLWNAPSCSNGNRGSVLTMTYQTLKCGPVAFNKESEESASSLVISTIQNIKDALIS GYESE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 5 | 207 | 203 | 6.04E-10 | – | |
| PANTHER | 8 | 237 | 230 | 5.6E-58 | – | |
| PANTHER | 8 | 237 | 230 | 5.6E-58 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0268900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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