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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0274700 |
| Transcript ID | LotjaGi6g1v0274700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Haloacid dehalogenase-like hydrolase domain-containing protein; TAIR: AT5G45170.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420; TrEMBL-Plants: tr|A0A072V5X9|A0A072V5X9_MEDTR Haloacid dehalogenase-like hydrolase; Found in the gene: LotjaGi6g1v0274700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59153733..59160487) extracted from Lotus japonicus Gifu genome v1.2.
AAGGCACAAATCAAGCTAGACAAGTAAGCCTTGCAGGAAACCATTGGCACACAGCTCCTAAAAAGAAAAAGCCCAAAATT TACATTCTTCCTTTCTGTTTGAGCATTAGTTTTCCAAGTAGAAAATCTCCCTTTAATTTGCTTCAAGCCATTGCAGAAAA TCCCCCATTACAAGTTTAATTCTTCATCTCATCTTTCTCCATATTACACTGCAACAACCCTTTGTTTTGGAACTTAAACC ACCTACAATGTTTTTTTTGTGTGTAAACCATTGTTATCTACTCTTCGAATGTCAACTATTCCAAATTCGAGATTTAGTCA TAGTTAAAGTCTTTTATCTCTTTCAGGATTATGGTGTAAATCATTGTTATTTTGTGTAAACCATTGTTATCCGGTCGCTC TTCAAATGTTAACTATTTCAAATTCGAGATTTAGTAACAATTAAAGTCTTTATTTCTTTCAGGATTATTGTGTGAAGATC AAACTCAATAACTTTTTTCACACACACTCTGTGTTGCCAACTTAGTCATCGCAATCGCAAGCCTAAACCAACAACAAAGT TGCAAAAGCTGGGTAGGATTAGGATTGTTGTGAGCATTGTTGCAAAATTGGATAGAATATGATAACTTATGAGTCCATAT TACCATAAAGTGTAGGAAAAATATCAGACTTCACAACGAACTAGAACTGAACACAGCAAGTGCCATGGCAACAACACGAG CAGTAGCATGTTCAATTCTCCCCACACACTCACGCCTTCCACGCACATTCAACAACAGCTATAACAACACATTCTCCTTC CCCGCCGCGACTCACGCAACCGTTTCCCACCATTTTCCCCCTTCCAATTTTCCCGGAAAATCTTCCCGCCTCCTCACCGC CTTCTCCGCCGCCGATAACCGCCACACCGCATCTCCAGACCTCGCCGTTCTCCTCGAAATCGACGGGTAATCCTTCTCCT CATCCTCATCATAATTCGAGATTCACTCTGTTAGCATGCTTCTCACGTTTTGTTCCGTTTCAACTGTTGCGTTCGTATTT TAGGGTTCTTGTGGATGCGCATCGTTTGGGGAATTGCCTAGCCTTCAACAAAGGTATGAACAATTCTCTGCATCTGGAAT TCTTCTGTGCTTGCTGTGAGTGTAACGTGCTGTGATTTTGTTTTTTTTCTTTCTCTGTTGTGCACGCAGCATTTGAGAAG CTTGGGCTTGATTGTGCGAGTTGGCCTGAACCTGTTTATACGGATCTTTTAAGGTCAGTTTGTTTTTGTGTAAATTTATT GGATTACTTTGCACTTGCGTATTCATGAAGTTGATTGATGGTACACTTGGATTCGTGTAAATCGATGCGTTGAGTTTCAT TGAAGCTTAGGTTTCTTTGCAAATTTACTTGAGAGAAGACTGAAAATTATGTGAGTGAAGAGTGTATTCAACTTGATGGA TGTGTACAATGGATATAGCCATGTACAGTAAGAGCTAGCTAGCTTTTGGCTATAACAAACTGCATAGAAGCTATGGATGC TAACTGAAGGGAACTAGAGGGAACTAACTAATTAACGGAAAGTTAAACCGCCTAACTAACTAACTAACTAACTGTTGACT GCCTAACTAGCATAACTAACTAGAGCTTCTATGTCATGTTCTCGAGTGCTCATTACGTTTGGTCATTAGATATTGGAATC TATTCAGGAATCTATTCACTCTTGATTACCGCAAATTTGTGTGAATAAATACTTACATTGTTTGAGAAGTGTGAACCATT TTCAAATAACTTTGCAGGAGAAGTGCTGGAGATGAGGAAAAGATGCTATTTTTGTATTTTAATCGAGTAAGTTGTTCATC TTTTTTTTTCTGTAGTAGCAAAAGAAAAAAAAAGGAAGCATATTGGTAAATATCAGCTATTTTTTTTCATTGTAAACATT AATTGAGCCATATTTTACTGTTGTTGCCTGTAATATACAGATTGGCTGGCCTGCATCATTACCCACGAATGAGAAGGGAC TGTTCGCAAAAAGTGTTTTGCAGGAAAAGGTATCGTCCTTACTCCTTACCCTTGATCCTGATGAATAGTATACTCCTAAT AATTTGTGTTTTTACTTTGATGTATGAGGACCATGAAGTATGTATTACGTGCAATTAGTTAACTAGGACTGTTGTTAATG ATGAAGAACATAGAATCTTCAGAAATCCTTCTTAAACTGTCCTCATTCCCGTGAACTTCTGTTTATAATGAAAGAGACAT TATGCCTCTCTACTTTAATACTAAACTTTACAACCAGAACATATCCCCTAGTAATGAAGCCTTTTCATTCCTATTTCTAG CATTTATAGGAGTAGCAAATTAACTTTGGGCTAATATGGAAATAGAAATTAATGTTATTAGAATTCCAGAGGGATATATA CTCCTTTTTCCTTTTTCATTGTTTTGTAGATTTTGAGAGAATAACTTATCCTCAGTTTTTCTGCTCCAAAAATAGAAGTA AATAGAAAATATAGTAGGGAAAAGAATTCCTATTTCCTATTGGAGTTTTATTTTGGCAAAACATATTACCTCTGAATTGT ACATTGTCTCTGTTATTAATTAAAATGATATCTGGACTTATTGATGCAATTAATTACTTCAGTGATATTAAGTCCTAAGA GATTAGATTGTATAGCCTAGTTAACTAAATGTCCTTGCCCAAATGGTGAAATGATTTTTACTCGTATTAAGAATTTGATG ATGAGAATTTATGGAGTTTGTGATTTATCATATATTGGCAGGAAAAGGCGATGAAAGAGTTTGTGATGTCAAAAAGTCTA CCATTACGACCTGGTGTTGAACAGTGGGTTATCTAACATTCATTGAATATGATTGTGCTTGTGTCATATGTGTTTTATTT CTGGGGAGCTCTCTTTCAAGGAGAGCTGTACTTTCTGGGTACTGTTAGAAGAGCAATATGTACGTTAGTTAGTGAGAGCA ATCCCTTTAAACTTATATGTCTCTATTAAGTTATCATGAATGTCTCTATTAAGTTTTCATTTTCTCTTAAAACTTCAATG TCACTATTAAGTTATCATACAAGACGTTCTTTCACATTGACACATTTTGGATTTTATCCAATTCACAGTTGTTTGAGTGG ATTTTATTCCTCTGGTTACTAATCACATGACAGACACTACTGGTTTTTAATTGTTATTTTCTCATCAATGACAAAAAGAA GTTTCACAGTTTAAAAATTTTAAGGATAGTTTTGTTATCTTGCCTTAGAATTTAATTTGGTCTTTACTGGATAGCAATAA ATATATTTTACACAGAATAGATGGGCTGTCAAGATGAAGTAACGCTACCTACCAGTGCAAGACCCTAGATGTTTACATTA CATGTTAAATTTCCTTTTTCCCTCTTGATAAGATTTAGAATTGGCAGTTGGTCATCTATTGGTTTTTGACAGAGTTTTAG GTTAGGAAGTCCCAGTTTACAATGCTTCTCCTTGTTTCCATTGTGTCTTAATAATAAACTGTTCTGCAATTGCTTGTGTT AGTTCTCCTACAGGTTTATAGGTTTCCCTGATATTTCAAGAATTTTGAAACTTGGATGACTCTGGAACTTCAGTTTGTAT TCCTTAACATAGTGAAATGTCTCCATTGACAGGTTTATTGATGATGCATGTGATGAAGGGATTCCAGTTGTAATATTAAC AGCCTACAGTAAAAATGGTGATAGTGATACTATAGCCAGGTACTTGTACTTAGTTCCAAATCTTTACAATGGTACTAATT AGCATACTACTATGATTATTAGAGGAATATGATTTTGCGGAGATCATCTAGAGACATTTTTTATCACCCAGAAACTCAGC TTGCTGGTTTGCTTTGGGTAGTGGAGGGGTGTGTTTGTGTGTGCCTGGGTTCCTTTTATTTGGAACATACTTGGAGCGTA TGATATGTGTAATTGAGTCATTAAGAGAACTATTAAGTCTTCAGGTGGTCCTATTTGTGGAATATTTTAGGGAAGGTATA ATTTTTAGGCAGTATAAGAAACATTTAGTACGCCTTCCATTCAATCGTTTTGTCTTCCATATCTATACTGTCTTTGCTGC CCCCCTCCCTCTCACCAAAAAAACCAAATTCATTTCTTTCTCTCCATTTCAGTTTTTTTCCTTCCTGAACTGTAGATAAT AATCTGAGTAATAGACTAAGTTCAGTGAAGTTGTTTGGTATATGACTGCATGTTCCAATATATTGCAGACATTATATTGG GCTTGTTGAGATTCATGATTGATCCTTGCTTGTTGCTTGTTTAGCTTCCTCTTTTTTATTTCCTAGAGAAAATGCTTGCT TCCGTTTTGCCTTATGTTTATTAAAACTTTTAGGGCTATAATGGAAAAACTTGGTGATGATCGAAGCACGAAGGTAATTA CTGTGGGGAATAAGGAGGTTGAGCAAAGCTCATATGGCCAACTGGTCTCAGGAAAGGTAATTGCTTCTGGTTTGGATGAA GAGCTTGCCAAGGAAGCCAAAAGAGCAGGTATATACTTCTTTAGTTGTTCATTATGCATGAGACCCTCATTCATGCATCT TTAGTTCACAGTGATGTGTTCAAACTGCTAAGGAGCCTTTCATTTCTGCCATTTTTGCTAGCTGCTGCTGAGAGACAAAG GTTGGCAAAGGAGGTAGCATCTGTGCTAAAGTTGAGTGTTGAGATTGATACCTCTGAAAGGTTAGTTCATTTGCCTCCAC TTTATTTTGCAAAAAATAAAAATAAAATAGTGGTCTTAATTATTTTTTCATGCATACTGTTTGGGATCCATACTCATAGA CATAGAAATGATATTGTGTATGACTCAGCTTCGTAGTTGTTAGACAAGGCTCACTAAGGGTGTGTTTGAAGGGGGAAAGG AAAGAAATCAATGGAAAGTGATGAGGAAGATGGGAACAGATTAGGGGGAAATGAAGAAGAAAAACAGTTATTCCTTCAAG TGAACTGATCTATGCCTCATGTTTTGCTTTTTACAGTTGACAGCACAAGGATTACATAAATATCTTAATGTCTTTATTTC ACCTTCGTAAAAGTGTGTTTCCTGATTAGGTATATTGAATTATCTTTTTAATGTCTACTTGTAGCTGTTCTGAAACAGTA TACTATAAACCTCTCCAGAACATGAGCTTATGAACATATATTAGCATTTAACATCTTATCATTGAATATGAATGATTTAT TTGGATTTTAATTGCATACTCAAATAGTAATGTTGTAGTCAGTTATCGTTCAATTTGCTGATCATATGTCCACTTGTCCA GTCTAGATAAGATTGTAGTTGCGCTGTATGCGGGAGCCGAATGTGCAGGGTTACCTCTCTGCAACTGTGTCCTTGTTGCA GGAAGCCAATCTGGAGTAGCTGGAGCTGAACGGGTGGGCATGCCATGTGTTGTTTTACGGAGCAGGTGATTGCTTTGTTC TTGGAAGTTCAATGAATGAAACATGTAATGGATAGGTGTTCATAATAGAACTATTTCATATTTTCATTGGAAGTTCCTTA ATTCCCTGGAATTCTGATTGTTTTCAATTTTAAATCGGTGTATCTTAGAACTGTTTCTTCTTTTTGTTTGTTTCCTGCAG TTTGACCTCTAGAGCTGAGTTCCCATTGGCAGATGCTACAGTGGAGGGGTTTGGAGGCGCAGATCTAACAATTTCAAAGT TGCGTGATCTTTGCAGCAAGAAAAAACCTAAGTATTGAATGGTAATTACCTTAGCTGCAATTACGAAAAAATTTAAGATT TTCTTCTTTTAGTTTACGTGAATCAAATTTGTGATGATGCTGAAAACCTTCCCACACTAATTTTCTTATGCCAGAGTTAT GAATTTACCCTTATCCAAGAAATTTGCAATAAACACAACCACACTTGCTCTGGATTTGAAGCTTTTTGCCGGCCGAATGA CGGGAATGGACCTCTAGAAAGGGAGTTTAAGATGAGTGTCTCTTCAGAGACAATGTATGCTGGTATTGGAATTATTTCAT TTCATGTTGATATTTGGCGCTTCATATAACACATCCACAATATAGTATGAGAGAAACCACACTGATACATGCGCTCTTGT TGTCGCAATTGCATGATCATATGTCTATCAGCAGCCTGAGGAAAGAGTTTTCTTGCTAGTCATTGTGGATGTGGAGAAGC TTTAACCGCAGTTGCTGGGTAAATATAATAGTTATAATGTAACATTAATTCATGTGATTGTTTTTTTTTTTTTTTATCTA AACGGATCTCAAGTCCTTCTTGCAGAGTGTAGAAACAAGATTGATTTTGTATTTCTTTTCTTTTAACACTTGAAAAATCC AACCATGGTGGGTTTGAAATGTCCCGTCGGACTAAGTGATTGAGCCATTTTTGGTAATAGACATTTGTCGCATTAGTGAA GTAGCCCCACTTGATGCATTATTAATCTTTAGCCCATTTATTTGGTCTTGTAATGGGTAGTTTACCAATAACTGATACTT TCATGTTAATCACTCCCAAAGAACTACTGGGCGGATTTTACGGCTATTAGTGACGCTAGAATTCCTCTCGCGTATCAGCA TGCAGTGTTACTAAGGAATTGCTGGCGTCCCCAACGTTGGTTATCAGTTATTAAGGAGCTCTGAATGATCATCTAGCTGA GTTAAGAAATCATGATGTGGCAACAGCAACTTCAAATTCTTCAGAGAAAGCTCATAGCTATCGTGTGGGCATATTGGGCG TCAATCCATTGCGAAACCATGCAGCACGTACATAT
CDS sequence (LotjaGi6g1v0274700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACAACACGAGCAGTAGCATGTTCAATTCTCCCCACACACTCACGCCTTCCACGCACATTCAACAACAGCTATAA CAACACATTCTCCTTCCCCGCCGCGACTCACGCAACCGTTTCCCACCATTTTCCCCCTTCCAATTTTCCCGGAAAATCTT CCCGCCTCCTCACCGCCTTCTCCGCCGCCGATAACCGCCACACCGCATCTCCAGACCTCGCCGTTCTCCTCGAAATCGAC GGGGTTCTTGTGGATGCGCATCGTTTGGGGAATTGCCTAGCCTTCAACAAAGCATTTGAGAAGCTTGGGCTTGATTGTGC GAGTTGGCCTGAACCTGTTTATACGGATCTTTTAAGGAGAAGTGCTGGAGATGAGGAAAAGATGCTATTTTTGTATTTTA ATCGAATTGGCTGGCCTGCATCATTACCCACGAATGAGAAGGGACTGTTCGCAAAAAGTGTTTTGCAGGAAAAGGAAAAG GCGATGAAAGAGTTTGTGATGTCAAAAAGTCTACCATTACGACCTGGTGTTGAACAGTTTATTGATGATGCATGTGATGA AGGGATTCCAGTTGTAATATTAACAGCCTACAGTAAAAATGGTGATAGTGATACTATAGCCAGGGCTATAATGGAAAAAC TTGGTGATGATCGAAGCACGAAGGTAATTACTGTGGGGAATAAGGAGGTTGAGCAAAGCTCATATGGCCAACTGGTCTCA GGAAAGGTAATTGCTTCTGGTTTGGATGAAGAGCTTGCCAAGGAAGCCAAAAGAGCAGCTGCTGCTGAGAGACAAAGGTT GGCAAAGGAGGTAGCATCTGTGCTAAAGTTGAGTGTTGAGATTGATACCTCTGAAAGTCTAGATAAGATTGTAGTTGCGC TGTATGCGGGAGCCGAATGTGCAGGGTTACCTCTCTGCAACTGTGTCCTTGTTGCAGGAAGCCAATCTGGAGTAGCTGGA GCTGAACGGGTGGGCATGCCATGTGTTGTTTTACGGAGCAGTTTGACCTCTAGAGCTGAGTTCCCATTGGCAGATGCTAC AGTGGAGGGGTTTGGAGGCGCAGATCTAACAATTTCAAAGTTGCGTGATCTTTGCAGCAAGAAAAAACCTAAGTATTGA
Protein sequence (LotjaGi6g1v0274700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATTRAVACSILPTHSRLPRTFNNSYNNTFSFPAATHATVSHHFPPSNFPGKSSRLLTAFSAADNRHTASPDLAVLLEID GVLVDAHRLGNCLAFNKAFEKLGLDCASWPEPVYTDLLRRSAGDEEKMLFLYFNRIGWPASLPTNEKGLFAKSVLQEKEK AMKEFVMSKSLPLRPGVEQFIDDACDEGIPVVILTAYSKNGDSDTIARAIMEKLGDDRSTKVITVGNKEVEQSSYGQLVS GKVIASGLDEELAKEAKRAAAAERQRLAKEVASVLKLSVEIDTSESLDKIVVALYAGAECAGLPLCNCVLVAGSQSGVAG AERVGMPCVVLRSSLTSRAEFPLADATVEGFGGADLTISKLRDLCSKKKPKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 33 | 363 | 331 | 2.2E-162 | – | |
| PANTHER | 33 | 363 | 331 | 2.2E-162 | – | |
| SUPERFAMILY | 74 | 364 | 291 | 7.57E-13 | ||
| Gene3D | 85 | 166 | 82 | 7.0E-14 | ||
| Coils | 245 | 265 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0274700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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