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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0282100 |
| Transcript ID | LotjaGi6g1v0282100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | weak chloroplast movement under blue light protein (DUF827); TAIR: AT1G12150.1 weak chloroplast movement under blue light protein (DUF827); Swiss-Prot: sp|Q9FWW5|Y1215_ARATH WEB family protein At1g12150; TrEMBL-Plants: tr|A0A1J7H143|A0A1J7H143_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0282100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59854631..59857156) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGCTTCAGAATCAGAGATAATCAGCCCAAAGATGCGAGTTCTCCAAGAGGAGAGGCTGCAGAGATTGACACAAGGGC ACCATTCCAATCTGTCAAAGCTGCTATTGGTTTATTTGGTGAAGTAGCTGTCTCCAGGGAAAGACGTTCTAATTCTATCA AGAGAAGATCATCAGAGGTAAGGACTAGTTTGATTCCATTCTCAGTTTTTGAATTTAAAAACTATTTTTAGGAAAAAAAA ATTAAATTTTGTTTTTCAAAAGAAGAGAATGAAAAAAAAAACTGTTTTAACTATGTTTTACAAAATTGAAATACATGCGA CTTCAAAACATAAAACACCTCTGAGATTATTTGGAATTATTATATTATATGTCTCACATTTACTAGAGATATGACAAAAA TAATTCTTATAAATGGTAGAGTTAAGTCTCCTAAATTCTAATATAATATCAGGGGTTATCCTAAATCCATTTGTTGGTGA CCTCCTATATATCACCTCGCAGTCATGCAAGCTCTAGATGTCCAGCTCTGGGTGCGGTGAGGTGGGTTAGAAGACCTACA TTGGCTAGAAATATGATTTAGATAGTCCCTATAAAGGGTAAAACAAGATTCACCTCTAAGCTAGCTTTTGGAGTACAATT AAGTCTCAAATTCTAATAGTGGTTTTAGTTTTAAAAATATAATTTTTTAAGAACAGTTTTTCAGAAGATGGGAATTATAC TTGAATGCTTGATGGCATAGGCATGGCCATGCTGGCTAATTAGAAACTTACAAATTACAATAAATATATGAGTGCTCTTT GTCTTTGCACACAACTTGAGGAGATATTCAAGTTTGCACAAGTTGTTTATTTGCATGATTTTGTGATTGAGCAATTGTAT CATTTTCATTGTGAATGTGTCATTTTTGTTCTGTTTCTGAGTTAGTAAATTGTGTGATTTTCTTGCAGAATGTACTAGAA AAGGAGACTCAGCTTCTCTTGGCCCAAAGAGAACTGAACAAGATAAAGAAAAAGCTTGAAAGTGCTGAGAATACAAAATC TAAAGCACTTATTGAGCTTGACAAGGCCAATGTGACACTTCAGGAACTGACAAAGAAGCTCACCAGTGTGAGAGAATCTA AGCAATCAGCAATGGAAGCAGCTGAAGCTGTGAAGAATCAGGCCAAAGAACTTGAAAGGGCACTATCCCAAAAAGCTATA GGATATGAAGCTTGGAAACAAGAATTAGAACATGCAAGAAAGGAATATTCAACCACAGTAAAGGAACTAGATGCTTCCAA GCAAGAACTCAACAAAATAAGGCAGGATTTTGATGCTGCATTAGAGGCAAAATTGGCTGCATTCCAAACTGCAGGAGAAG CTCAGCGTTCAGCGAAATTGAACTCTGAAAAGCTTAGTGAACTCTCAAAGGAAATAGCAACCATGAAAGCATCAATTGAA CAGTTGAAGCTTGCCTCTTCACAGGCCCAAGAAGAACAAGCAAATACCATGAGAGAAAGAGAGGAGAAACTAAGTTATTA CAAAAGTGCAAAGGAAGAAGCAGAGTCGAAATTAGTGGCTCTAAAGAATGAGTATGACCCTGAACTGACACAAAATCTGG AGGCCAAACTTGCTGAAACAAGTGCAGAGATTCAGGAGCTTCAAGAGCAGATGAAAGACAAACATGCTTCTGAGATGGAT TCTGTGAAGCTGATAACTTTGGAGATTAAAGAAGCCACAGAGACACTGCAGCAAGTTTCTGAAGAAGAAACCTCCCTGAG GAACCTTGTAGCCTCCCTTAAGGAAGAATTAGAACAAGTGAAGAAAGAGCAAGAGGAACTCAAGGAGAAGGAACACGCAG CAGAAGCTCTTGCTGCTAACTTAACTGGTGAAATACAAAGTACCAAGGACGAGACAGATTCTATGGAGAACAATAATTCT GATGCCATTCATCAGTTAAATTTGAAAATTGAGCAACTTTCATTTGGGACAGAAAATGCAAGAAGAGAAGAAGAAGAAAT GAGAACAAAAGCTCAAGAGCTGAAGCAAGAAGCTGAAAATTCCAGAGCTGTGGCTGAAGAAATGGAGCAGAAGCTAGAGG TTATCTTGAAACAAGCCGAAGAAGCGAAAGCAGCAGAGCAAAAAGCCATTGAGGAAATGAAAATGTTCTCTGACTCACAA GGTGGAAGAGTCTCAGTTTCAGATTCCAATGGTAAGATCATACTGACAGTTGAGGAGTTTGCATCTCTGAGTGGGAAAAT TAAGGAATCTGAAGATTTGATTGAGAGGACAGAAGCAGCTTCCATGGCTCAGGTGGAAGCAATCAACACAAGGAAAATTG AAGTGGACAAAAAAGTGGAAGCTAATCTTAAAGCAATTGAAGAAATAAAGGCTGCAACAGACTTGGCTTTGAGGAATGCA GAGATGGCAGATTCTGCAAAACTTGCAGTTGAGGGTGAACTCAGGAAGCGGCGCAATGAAGAACAGAAAATGGAATCTGA TTTTCAATTCTCAGATACTTCAAGGCCAATATCTCTGCGCAGCTAG
CDS sequence (LotjaGi6g1v0282100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCTTCAGAATCAGAGATAATCAGCCCAAAGATGCGAGTTCTCCAAGAGGAGAGGCTGCAGAGATTGACACAAGGGC ACCATTCCAATCTGTCAAAGCTGCTATTGGTTTATTTGGTGAAGTAGCTGTCTCCAGGGAAAGACGTTCTAATTCTATCA AGAGAAGATCATCAGAGAATGTACTAGAAAAGGAGACTCAGCTTCTCTTGGCCCAAAGAGAACTGAACAAGATAAAGAAA AAGCTTGAAAGTGCTGAGAATACAAAATCTAAAGCACTTATTGAGCTTGACAAGGCCAATGTGACACTTCAGGAACTGAC AAAGAAGCTCACCAGTGTGAGAGAATCTAAGCAATCAGCAATGGAAGCAGCTGAAGCTGTGAAGAATCAGGCCAAAGAAC TTGAAAGGGCACTATCCCAAAAAGCTATAGGATATGAAGCTTGGAAACAAGAATTAGAACATGCAAGAAAGGAATATTCA ACCACAGTAAAGGAACTAGATGCTTCCAAGCAAGAACTCAACAAAATAAGGCAGGATTTTGATGCTGCATTAGAGGCAAA ATTGGCTGCATTCCAAACTGCAGGAGAAGCTCAGCGTTCAGCGAAATTGAACTCTGAAAAGCTTAGTGAACTCTCAAAGG AAATAGCAACCATGAAAGCATCAATTGAACAGTTGAAGCTTGCCTCTTCACAGGCCCAAGAAGAACAAGCAAATACCATG AGAGAAAGAGAGGAGAAACTAAGTTATTACAAAAGTGCAAAGGAAGAAGCAGAGTCGAAATTAGTGGCTCTAAAGAATGA GTATGACCCTGAACTGACACAAAATCTGGAGGCCAAACTTGCTGAAACAAGTGCAGAGATTCAGGAGCTTCAAGAGCAGA TGAAAGACAAACATGCTTCTGAGATGGATTCTGTGAAGCTGATAACTTTGGAGATTAAAGAAGCCACAGAGACACTGCAG CAAGTTTCTGAAGAAGAAACCTCCCTGAGGAACCTTGTAGCCTCCCTTAAGGAAGAATTAGAACAAGTGAAGAAAGAGCA AGAGGAACTCAAGGAGAAGGAACACGCAGCAGAAGCTCTTGCTGCTAACTTAACTGGTGAAATACAAAGTACCAAGGACG AGACAGATTCTATGGAGAACAATAATTCTGATGCCATTCATCAGTTAAATTTGAAAATTGAGCAACTTTCATTTGGGACA GAAAATGCAAGAAGAGAAGAAGAAGAAATGAGAACAAAAGCTCAAGAGCTGAAGCAAGAAGCTGAAAATTCCAGAGCTGT GGCTGAAGAAATGGAGCAGAAGCTAGAGGTTATCTTGAAACAAGCCGAAGAAGCGAAAGCAGCAGAGCAAAAAGCCATTG AGGAAATGAAAATGTTCTCTGACTCACAAGGTGGAAGAGTCTCAGTTTCAGATTCCAATGGTAAGATCATACTGACAGTT GAGGAGTTTGCATCTCTGAGTGGGAAAATTAAGGAATCTGAAGATTTGATTGAGAGGACAGAAGCAGCTTCCATGGCTCA GGTGGAAGCAATCAACACAAGGAAAATTGAAGTGGACAAAAAAGTGGAAGCTAATCTTAAAGCAATTGAAGAAATAAAGG CTGCAACAGACTTGGCTTTGAGGAATGCAGAGATGGCAGATTCTGCAAAACTTGCAGTTGAGGGTGAACTCAGGAAGCGG CGCAATGAAGAACAGAAAATGGAATCTGATTTTCAATTCTCAGATACTTCAAGGCCAATATCTCTGCGCAGCTAG
Protein sequence (LotjaGi6g1v0282100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFRIRDNQPKDASSPRGEAAEIDTRAPFQSVKAAIGLFGEVAVSRERRSNSIKRRSSENVLEKETQLLLAQRELNKIKK KLESAENTKSKALIELDKANVTLQELTKKLTSVRESKQSAMEAAEAVKNQAKELERALSQKAIGYEAWKQELEHARKEYS TTVKELDASKQELNKIRQDFDAALEAKLAAFQTAGEAQRSAKLNSEKLSELSKEIATMKASIEQLKLASSQAQEEQANTM REREEKLSYYKSAKEEAESKLVALKNEYDPELTQNLEAKLAETSAEIQELQEQMKDKHASEMDSVKLITLEIKEATETLQ QVSEEETSLRNLVASLKEELEQVKKEQEELKEKEHAAEALAANLTGEIQSTKDETDSMENNNSDAIHQLNLKIEQLSFGT ENARREEEEMRTKAQELKQEAENSRAVAEEMEQKLEVILKQAEEAKAAEQKAIEEMKMFSDSQGGRVSVSDSNGKIILTV EEFASLSGKIKESEDLIERTEAASMAQVEAINTRKIEVDKKVEANLKAIEEIKAATDLALRNAEMADSAKLAVEGELRKR RNEEQKMESDFQFSDTSRPISLRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 26 | 26 | - | – | |
| PANTHER | 6 | 568 | 563 | 1.2E-224 | – | |
| PANTHER | 6 | 568 | 563 | 1.2E-224 | – | |
| Pfam | 22 | 566 | 545 | 1.1E-44 | ||
| Coils | 61 | 141 | 81 | - | – | |
| Coils | 145 | 186 | 42 | - | – | |
| Coils | 208 | 242 | 35 | - | – | |
| Coils | 247 | 267 | 21 | - | – | |
| Coils | 273 | 300 | 28 | - | – | |
| Coils | 305 | 381 | 77 | - | – | |
| MobiDBLite | 362 | 381 | 20 | - | – | |
| Coils | 400 | 459 | 60 | - | – | |
| MobiDBLite | 401 | 428 | 28 | - | – | |
| MobiDBLite | 552 | 584 | 33 | - | – | |
| MobiDBLite | 552 | 571 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0282100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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