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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0283200 |
| Transcript ID | LotjaGi6g1v0283200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal-associated protein; TAIR: AT4G16380.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|Q9LZF1|HIP6_ARATH Heavy metal-associated isoprenylated plant protein 6; TrEMBL-Plants: tr|I1MFR6|I1MFR6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0283200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59985233..59986770) extracted from Lotus japonicus Gifu genome v1.2.
TCCACTACTCTTCACCTTCTCTTAACGACAACACTGACAAGAAATCCAACCTTCTAAGTCTACGTGTTAGCATTTGATTG GTGAGAGTTTTCTTCTTAAGATTGATTTCCTTTCTCTTTCCTCTTTGTTATTGCTCTCTAGTCTCTTTAATTCTGTCCCC ATTCACATCATCATTTTCTTCTGAGCCTCAGATCTGAACTCTCATCCACAACCATGGCTCCAGAAAAGGTACTTTCATTT CAATTGTTTTCTGAAACCACCACTCTTTATTACATAATATTTGATTCTTGTGGTCCTTGTTTGTGAAATGAAAATTGGAT ACATCATCAATTGGTTCTAAGCTTGTTCTAATGGGTGATTTTCTTGAACACATTCATTCAGGTAACCCTCATGAAGCTCA AGGTTGATCTTGAATGTGAGAAATGCTACAAAAAGGTCAAGAAAATTCTCTGCAAGTTCCCTCGTGAGTTCACCACATTC TTAATTTCTACTTTCTCATATATATAAATTTAATTAGACTTTTTATTTATTAGTACATGACAGAAGATATCAAATTGAGT TAAGTTTTGTTTTAATTTTTATGAACAATAGAAATTCGAGACCAGAAGTACGACGAGAAGGACAACATTGTGTTCATTAC CGTGGTATGCTGTAGCCCTGAGAAGATTAGGGACAAGCTATGTTGCAAAGGTGGGGGTACCATCAAGAGCATTGAGATAG TGGAACTGCCGAAGCCCAAACCGCCTGAGCCTGAGAAGAAGAAGGAGGCCGACAAGCCCAAGGCGGCTGAGCATGAGAAG AAGAAAGACGGGGAAAAGCCCAAGGCTGCTGCTGAGCCTGAGAAGAAGAAGGATTCCGAGAAGCCCAAGGCGGCGGAGCC TGAGAAAAAGAAAGATGGGGACAAGGAAAAGCCCAAGTCAGATGGGCCAAAGAAGGGAGATGAGAAGCCCAAGGACAAAC CCGCACCCGGTCCGATACCGGTCCACCCAGTGGGGCCACCGCCAATGGCAGTGCCAGTTGGGATGATGTATGCTCCAACT CCTTGTTACGAGGGCAGGCCTGCCGGGCCGGGCTTCTATGAGTATGGTGGGCCGATGCCATGTTATGACGGGTATTATGC GAGGCCCGTTTATGATAGTTATGGTGGAAGCAGACCCTATTATGTGAACAATCGGTGTGATCAGTATTTCAGTGAAGAAA ATCCAACAGGGTGCTCAATTATGTGATCATCACCACATCCACGCCATTGCACATTCTCTCAACTCCAATCATGTTCTTCA AGTAACTATTTCTTTGTATTTGTTTTTAAGGTTCATATCATATGTTTCATAGGAAAGATAAAAGGAATGACTATGAGTTG GTGAAATAATAAAAGGTTATTTAGAGGGGATTAAATGCTAAGATGCATGTTATTTCGTTACAAGTTTGATAAATTAATAA AGTTTCTCTACATATCTATATAGCAATCAAGTTTGTGTAGTGGGATTTGCCTTTCTAGATTGATTTTGTTGTTGAAATTA ATACATTTTCTAACCACA
CDS sequence (LotjaGi6g1v0283200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCAGAAAAGGTAACCCTCATGAAGCTCAAGGTTGATCTTGAATGTGAGAAATGCTACAAAAAGGTCAAGAAAAT TCTCTGCAAGTTCCCTCAAATTCGAGACCAGAAGTACGACGAGAAGGACAACATTGTGTTCATTACCGTGGTATGCTGTA GCCCTGAGAAGATTAGGGACAAGCTATGTTGCAAAGGTGGGGGTACCATCAAGAGCATTGAGATAGTGGAACTGCCGAAG CCCAAACCGCCTGAGCCTGAGAAGAAGAAGGAGGCCGACAAGCCCAAGGCGGCTGAGCATGAGAAGAAGAAAGACGGGGA AAAGCCCAAGGCTGCTGCTGAGCCTGAGAAGAAGAAGGATTCCGAGAAGCCCAAGGCGGCGGAGCCTGAGAAAAAGAAAG ATGGGGACAAGGAAAAGCCCAAGTCAGATGGGCCAAAGAAGGGAGATGAGAAGCCCAAGGACAAACCCGCACCCGGTCCG ATACCGGTCCACCCAGTGGGGCCACCGCCAATGGCAGTGCCAGTTGGGATGATGTATGCTCCAACTCCTTGTTACGAGGG CAGGCCTGCCGGGCCGGGCTTCTATGAGTATGGTGGGCCGATGCCATGTTATGACGGGTATTATGCGAGGCCCGTTTATG ATAGTTATGGTGGAAGCAGACCCTATTATGTGAACAATCGGTGTGATCAGTATTTCAGTGAAGAAAATCCAACAGGGTGC TCAATTATGTGA
Protein sequence (LotjaGi6g1v0283200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPEKVTLMKLKVDLECEKCYKKVKKILCKFPQIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGGTIKSIEIVELPK PKPPEPEKKKEADKPKAAEHEKKKDGEKPKAAAEPEKKKDSEKPKAAEPEKKKDGDKEKPKSDGPKKGDEKPKDKPAPGP IPVHPVGPPPMAVPVGMMYAPTPCYEGRPAGPGFYEYGGPMPCYDGYYARPVYDSYGGSRPYYVNNRCDQYFSEENPTGC SIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 243 | 240 | 3.6E-112 | – | |
| PANTHER | 4 | 243 | 240 | 3.6E-112 | – | |
| SUPERFAMILY | 7 | 64 | 58 | 1.83E-7 | ||
| MobiDBLite | 75 | 167 | 93 | - | – | |
| MobiDBLite | 78 | 157 | 80 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi6g1v0283200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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