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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0287100 |
| Transcript ID | LotjaGi6g1v0287100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BAG family molecular chaperone regulator 5; TAIR: AT1G12060.1 BCL-2-associated athanogene 5; Swiss-Prot: sp|O65373|BAG5_ARATH BAG family molecular chaperone regulator 5, mitochondrial; TrEMBL-Plants: tr|Q2HT37|Q2HT37_MEDTR BAG family molecular chaperone regulator 5; Found in the gene: LotjaGi6g1v0287100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:60463135..60465730) extracted from Lotus japonicus Gifu genome v1.2.
GTCCTTTGTCTCAAAACGAACGTGGGGTCCCGCACAAAACGAAAGCTTCTAAAATTTCATCTCACATCAAACAAACACAA AGCGCGTTACGCGCCAACATAATTCAAGAGAACAAGAAGACCCATCTCACAAAACAAAAGCCATTCTCCAATTTTCATCT GCAATCCCTTCACTATTCCCAAATCACCATGAAACCCTTCTCCTCCTACTCAACTTCAACCACCGTCACCTACACCTACC ACAATGACCACACTACCCCTCCTCAACACCCCAATTCCACTCAACTCCCTACTCCCCAATCCACCGCCGCCACCGCCATC CAATCCACATACCGCGCCCACAGGATCCGCACCCTGTACTGGAAAATCGCCGCCGTCGACTCCGAAGCCGATCAGCTACA GCGCCTGATCCAACGCCAGGACACGGTGGACGCCGTGCGCGCCAACCAATTAGAGAAGCTGAGAATGAACGAGGCGCTGA TGGCTCTGCTGCTGAAGCTCGATTCAGTCCCCGGGATTGATCCAACGGTGCGGGAAGCCCGGAGGAAAGTGACCCGCCGG ATCGTGGGGTTGCAGGAGATTCTGGACTCTGTTTCGGAAGCTAAGGTTGATGAATGGTCTTTGAATAATTGGGATCAAGT CATGGAAGAAATGGAAGAGAGTGTTTGTAGAGAGAGAGGTGGTGATGAAATGGAAAGGTTTTGTGCTGAAAATCTCGGGT TTCGGTGTCTACAAAGGTTTCTTCGTGAACCCTGATCTCATACAATACTTACTCTGTTATCAATATGAATGTGCTATACT ATAATTGCATAGTTGTAATCTCTAATTTGTACCTAGTTATAGAAATTATGATAGCTTTTGTTAGTTAAAACAGTTGAAAA TTTCAAATTATTACTAAGGAACATGTTGATGATGAAGATTTCAGAACATGTGCAAGATCCACCATGTGCTTAGATGTTAT TTTTGGGAACAAAACAAGTAGTAGTAGTAATTTAAGATAGTGTGATCATTGTGATCATAGCTGAGGTAGAGTAGTTTGAG GTGGTGCTAGTTGGTGCAGCTGCACTTGCACCTGGACATGCATCTCTTGCAGTCAGAGAGTGTTGGGTAGCTAGTGTTGG TGTCACATTTGTTGATGCAATTGGGCCTTGAAGTGCCACCCCACAAGCATTGAGCCATGCAGTGGAGGATTGGGGAGCAG GTTGGACAATTGGTGTTCATCTGGGTTACAATGCAGCCTTTGCATCCTCTGCCACCGTTGAGCGGGCAACCACCCACTGA ACCGCCGAGTACAGGCGAAGTTACCGCCAGTAAAATCAACAATAGTACTGCTTCTACTTGGACAGCCTTTGCTTTCTTGT TCGCCTCCATATGAAGTAGAATGTTTTTATATGTTTGTAGAGTGTTCTTCACTGGATGTGGAGAAGAGAGGAGTGTATAT CCTTTTTTTTCACCATAAGATTAATATAGCAAGGCAGAATTGTGAGATCCAGAGAAGGCATCGAAAGTGAGGAAACATTT AATTGCTATTAAACTCACATTTACTCTGGTGAAGCTCTGGCAGCCAAGGGCTCTCTTGGTTTGCACAATGGTCTCATGGC TATCTTTTTTATCAAGCTAAATGAATCACTGCATGGTGGCAATGGTAAGTATGGATTTGTTAAATTATATTTTTTTTCCC TTTTATTATACTCGCTCTACAGATTATTACTCCTATATATAGGAATAAATTACACAAACCTCTTAAGATGTATTTATGAG TTAAGTTTTTGGATGGAAGTAAAGGGAAGAGTGAAGCTTAAAAGAAGCATATTTGGGTGATTATGGAAATGGGGAAGAGT CTAACCCTCCGAGACCCTCCAAAACTCGGTTTTAACCATTTTTAGTTCTCCCAAATTGTGAGGTTTTGGAGAATTTGGAA ATTTCAAACAAGGGAAACGCTTAACCTCCTTCTCCCCTTCCCCCCAAAAACTATTAAACAAAAGGCTAAGTAAGGCTAGA CTACCTACATTTGCTCCAACAAATCCAATTCTTGCTTCCACATCTAAAGCTTTTGGATAGCATGGTTTTAGTGGTAAGAT TCATACGAGATGGAAGCAAAATGCAAAGCTGAGAAAATCAGAAAACTCTTTTAATTATGCGATTTTACAATTAATAATGT TGTATATTAGTCATGTTTGGCATGTCATTTCAGCTAGCTTATAACTTATTTGATTAGCTTAAAAGCTTTATAAAAGTGTT TGGTGAAGGAGCTTATTTCAGTAGCTTAAAGCTTTAGGTTATGTTTGGCATGTCATTTCAGCTAACTTATAGCTTATTTG ACTAGCTTAAATCTTATTTGACTAGCTTAAATCTTATTTGACTAGCTTAAAAGCTCTATAAAAGTGTTTGGTGAAGGAGC TTATTTCAATAGCTTAAAGCTTAAAGTTATAAGCTATCTCAGGTAGCTTAAAACTTAAAGCTTATAGCTTATTAAATATA TTCTCATTTTTATCCTTATTATTTTATTTAAATTCCACCTTTAGCCTTATATGTTTTTTACTAAACCTATTTACTTATGA GTTATCACACTTGTCTCATATGCACATCATTTCCGC
CDS sequence (LotjaGi6g1v0287100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACCCTTCTCCTCCTACTCAACTTCAACCACCGTCACCTACACCTACCACAATGACCACACTACCCCTCCTCAACA CCCCAATTCCACTCAACTCCCTACTCCCCAATCCACCGCCGCCACCGCCATCCAATCCACATACCGCGCCCACAGGATCC GCACCCTGTACTGGAAAATCGCCGCCGTCGACTCCGAAGCCGATCAGCTACAGCGCCTGATCCAACGCCAGGACACGGTG GACGCCGTGCGCGCCAACCAATTAGAGAAGCTGAGAATGAACGAGGCGCTGATGGCTCTGCTGCTGAAGCTCGATTCAGT CCCCGGGATTGATCCAACGGTGCGGGAAGCCCGGAGGAAAGTGACCCGCCGGATCGTGGGGTTGCAGGAGATTCTGGACT CTGTTTCGGAAGCTAAGGTTGATGAATGGTCTTTGAATAATTGGGATCAAGTCATGGAAGAAATGGAAGAGAGTGTTTGT AGAGAGAGAGGTGGTGATGAAATGGAAAGGTTTTGTGCTGAAAATCTCGGGTTTCGGTGTCTACAAAGGTTTCTTCGTGA ACCCTGA
Protein sequence (LotjaGi6g1v0287100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKPFSSYSTSTTVTYTYHNDHTTPPQHPNSTQLPTPQSTAATAIQSTYRAHRIRTLYWKIAAVDSEADQLQRLIQRQDTV DAVRANQLEKLRMNEALMALLLKLDSVPGIDPTVREARRKVTRRIVGLQEILDSVSEAKVDEWSLNNWDQVMEEMEESVC RERGGDEMERFCAENLGFRCLQRFLREP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 176 | 172 | 6.4E-80 | – | |
| PANTHER | 5 | 176 | 172 | 6.4E-80 | ||
| MobiDBLite | 15 | 36 | 22 | - | – | |
| ProSiteProfiles | 37 | 66 | 30 | 7.602 | ||
| Gene3D | 37 | 139 | 103 | 6.4E-10 | ||
| SUPERFAMILY | 55 | 137 | 83 | 1.1E-14 | ||
| SMART | 59 | 136 | 78 | 3.3E-15 | ||
| ProSiteProfiles | 59 | 136 | 78 | 13.427 | ||
| Pfam | 63 | 134 | 72 | 1.6E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Chaperone binding | Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport. |
Expression pattern of LotjaGi6g1v0287100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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