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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0300600 |
| Transcript ID | LotjaGi6g1v0300600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-Hydrolases superfamily protein; TAIR: AT4G14290.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|P54567|YQKD_BACSU Uncharacterized protein YqkD; TrEMBL-Plants: tr|G7IKD8|G7IKD8_MEDTR Alpha/beta hydrolase family protein; Found in the gene: LotjaGi6g1v0300600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:61815118..61822436) extracted from Lotus japonicus Gifu genome v1.2.
GTCAAAACTTGTCAGGGGGCAGATAAAGGTGTCTAATCCCCATTAATTATGTTACTTTTCCCACGCTAGCTCCAGTCCAC AGCAAGTAGTATAATTAATTTACCCATTTGAAAACTAGCCACTGTATTTCATTATTTACTAATTATTTAATTAAATTGTC TTAAAGTAACAATGATATGTCATATGTGATTCAAAGAATGAATATGAGCTGTATGCCTCTGCTTCTTTCGACAAAACCGA AGAACAAAAGAGAAGTACTTAAGATGGTCAGGAAATAGATATATTATTATTATTTTCATTTGATATCAAAAAGCAAACAG TAAAAAGAAACAAAATATGTAGAATTTATGTAAAAGCTTATGATTATATTATATATGTATATTTTCTGAAGAGGAATTCA AATATTGGGTTGGAAAATGACCAGCTTTTCATGATGCCAGCAGCACCAGGTACAGAATCACCTGTATCTGCTTGGTTGAC AGCAACAACAACATTTTCATTATCTTATTTTCCATTTAAGTTCTGTTTTTTTGTTGTTTGTTGTTGTTTCCAACAAAAGA AGAACAGTTGGAAGGAAGCAAAAAAGAACAACAAAGACAAGAGCCTGGTCCAGTCCTTTTCTTTCTGTTTTCTTCTTCTT TACTTCTTCTACTTTGTCTCACAGTTGTCACCTCTCAACTCTCTCTCTCTATTGAATGCATGTTTGTTTCAAGAGCTGAA ATTTATCATCTCTGATAGTTTAAAAACATGGAACAGCTTGCCAACTTCATCATTCGCCCACCAAGGTATCAACTTTACTC CTTCTTCCTCTCTGTTAGGATCACTTTCTCAACCAAAGTGTGCTTTTTTCTTTTTTTTTTCACTTTCTGGAACTTGTTTT TTCTCTTTGAATTCTCAGATGGGTATCTGAATGTACTTCTTATGACTATAACAACTTCCTATTGCTTGTTATGTTCTGAA AATGAGATTTGCAAATCAGGAATAAAAAGGAGTGAGAAAGGAAATTATATGGAGATTTTTGCTTTGTGTAGATAGGGGAA GAAAATGGAGAAAAGAGAAAATAAGTGAATTTATTTATTGTTTGGACAGAGAGAACATGGAGAGAAACAAAGATGGATTT TTTCTCTGTTTGTCTGGTTGGACAAAAAGTGAAAATATAGAGAATGTATTTATGTTAAATGAGTTTTACATCTTTTTAAA TAGTTGTAGGTATAAGTAAGTAGATGAAATTTTTTGTCATTTTACACTAGTTTTTGCATTTTTCTCATTTTGTTCTCATA AGAGAATGGAAAACTTGTAAGTGGATCTCATTATGTTCCTCTCATTTTAATTTTGTGCAATGTACCATTGTACCTCTTCC AATTTTCTATTAAAACAATCACAGGGTTCATGTTGGTTGAAATATTTTCAGGATTTATATTGAATAGTCATGTCCTTGTA AGTTGTAATTTTAACGATATGTGATGAAGTTCAGCTGCAATATATAGCTTGAGGCATGGTTATGCTAATTATGCAGCTGT ATGTGGTATGCCTGTCACAGAGTGGCTACATACTTCAATATCCTTCTGCAATCCTGGTGTTAGATTAGATGAACTCACAG GGACTAATTTCTTTGCATTATTTCATTTCAACTTTTAAATTACTGTGATATGATTGCATCTTTTACTGATATGCAGAGCT GAATATGATCCAAAAAATGATTTGCTGGAGCACGAGTTCATGTTAAAAGGGAAATTGTTTCAACGGAAGGATGTGGAGGT AAGGTTAAAAAATAAATTCAGCATGTCAGTAAAAGCATTAGATATGTGAAAACCCATTGAAAGATTGCAAGTTTCTGCTT TTGAGGCTATAGCTTTTACCCTGAAAGCAATTCAGTTTGAAAGCAATTCTATTTGATTGCTCTTTTGGACAATTGTCACA ATAAATGTTACTTATCTAGAATGTCAACATAAGTAATGGGTTAGTCACATTTAAAAACAGTGAAACTGTTGTAGGATGAA TAAAATCTCAGAACTAATAATCTACACGACTTGCTTCTTTAAGTTTTGTGCTGATTCCTTTTATGCACGTGATATTCTGA TTTTATATATCAATTCAATTGGGAAGTTATTGTTGATGACATTGTTTGTTTGATCGTTTCCATCGTAAGTATTCTTTTTT TATTTTATATTTTAGTTGATGACCCGAAGTATCAGCTTGTCATGTAATATTTGATATTTTGCAGATAAAAAACAGCCATG GTATTGTTCTTCAATGCAGTCATTACATTCCTATAGTCAGTCCTGATGGAAAGCCTCTGCCGTGTGTAATATATTGCCAT GGAAACAGGTGATACTGATATAAATTGTATGACCAAAAGTTAACTCAGTCGCATCTTTAAATCCTTTCCTTTTCAGTTTC TTTATGTAGCTGGATAAATGTATGCATGATCGGTTTGACACGGTGACCATGTGGGAGTTGCTGTATTTGCAACATAACAA TGCTAATTTGAAATGTTTGTTTTTTCAATATTTGTTTACTGATTATGTACTCAGAAAACTATGAAAATTCTTGATATTAG TAAATTCTGATCTCTTTCATGAGGTTCTTTGCTGATGATTTTTTATTTGTAATTGCTCGCTTTATAGATTTCTGTTCTAT ATGTTCTTGCTTACTCTGTCTATGTTTATGGCAGTGGATGCAGGGTAGATGCCAGTGAAGCTGCTGTAGTTTTACTTCCT TCAAATATTACAGTTTTTACTATGGATTTCTCAGGATCTGGAATTTCTGGAGGGGAGCATGTCACTCTTGGTTGTAATGA AGTAAGTGCTTGATCAATAACTGTTTGAAAGAATATAATTATCATTTATTCAGTATGAACTTATTGATCATGCCACAACT TGCTTGATTTGGGTCTCTTAGATATATCTGCCAAAGTAATAGGAGAATGATGGGGATGTAACACTAGGGATTGAAGATGG GTTCATGAAATGGAGAAATATTTCAAGCACACTTTGTGATTTTGTGATTACCAATTGCCGGCAAACTCAAAGGAGGATTC TACTCGATAGCTATAAGATCATTAACGCTTTATGGTTGTGAATGTTGCTTATTGGGCATTAAAGTGCCATGAAGAGCGAA GCCAAAAAATAAGCATAGCTGAGATAAGAATTTTGAGGTGGATGAGTAGGAATACTAGTTAGGAGTTATGCTTTCAAAAG TTAGAGTAGCACCTATTGAGAAGAAGCTGACAGGAACTCACCTATGGTGGTTTAATTTGGTCATGAGAGGAGAAGACAGT TAGAGGCTCTAGTTAAAAAAAAAGTTTAAAAATAATCTAATTTAAGAGGGTTCAGGAAGTCCAGACATAATTTCATAATC ACTAGTTTAATCCAAAAGTGTTACCAAATAACTTTGGAAACATGGACTGGAATACTATATAGCGTTGGCAGAAAATATAA AACTTGTGATGTGCCTGATGCAGGATACTTATCCTTAATTATTTTTAATAAACTGCTGAATATATTTCAGTAAAAAAATG CTTGGGTTTGTTCTCTGCTGGGATTTTTCATATGCATACTACCATTTGCTTTGTTCCCGTTTTCTTCTATGAAATTTATT TAACATTATTAACTGTTTTCAGAAGGATGATCTGAGGGCTGTGGTCAACTATCTGCGGACCGATGGAAATGTCTCTCGCA TTGGATTATGGGGACGCTCAATGGGTGCTGTGACTAGGTAAATTTTTATTGATTCTTCATTTTACCTTTCACTTTGAATG AGGTTAAAGAGGAAAAAGTTATTATTAATATTCATACATAGGTTGTAGCAAGAGGTTGTAATCGGTTCTGTTATTATTAT TCAGATCTTAAAGGTAATTGCTTCTAAGAAGTTTATTAATATTCAATTATTCATACATAGGGTACTATCGATGTGTTTTT TAATCTTGAAGTCAATTCATAAACTCCCTGGTTATGTAGCAATTCAATCTTACAGTTTACATGGCTTTTCTTCTTGCGAT TAACAATGTCATTACTTGCAGCCTGATGTATGGAGCTGAAGATCCTTCAATTGCAGGGATGGTTTTAGACAGTCCCTTCT CTGTTTTGGTTGATTTGATGATGGAACTTGTAGATACATACAGTGTTCGTCTACCAAAATTCACAGTGAGTATATTCTAT TTTTGGATGGAAAATGAGAATATCTTTCATATAAATTATCTATCTGAAAACTGAAACTTTTAATGTATGATTTCATTTCA TATTTTAATGCTTATTTACATTTTGGTTACTAAACTACCTTCATGCTTAGTCTATGGTGTGTTACCACATAATATATATG ACCAAAAGTTGTTTGGAGGAGGTTCCATTTTAACACCAATTAATAACTCTACTCATAGAATTTGAATAGTTTTTCTTCTT GTGTGTTCAAGACTTCTTCTTTTCTTCTTTTAGATGCTATATCTTGAGAAGCAGTTGATCAAAACTTAAGATTTATTATG TAGCAATATAGCAGCTCCAACAAATGTTTATGCTAATTCTTTTCTCTAGGGGATTGTGAAATGTGGATATCTGTAGTTTG CAACATATAGTCAGATCTTACAATGAACATTTTAAATTCTTGGTATCTTGAACACATATAGCATCTGATTGCAAGGCCCT TTTTACCCTTATTAAGAGAGATTGTCATCGCCCTTTTCCCCATTTATTAATGATAATTAATAAATAAATTATATGCCCAA TAAATGAAGCACAGTTGCTTAACCTTTTCTAGAAGAGCATAGATTCGTGGCATTATTTTTGATGCATTTTTTTCCTTGTT ACAGGTGAAATTCGCAATTCAATACATGCGAAAAACAATCCAGAAGAAGGCAAAATTCGACATAATGGACTTGAACACCC TTAAGGTTCCTTTTGAATTTTTTTTCCCTATAGAAGTTTGTTTACTGAAAGAATTTATTGTTATTGACCTGATTGTATGT AATGATTGATTAGTTTAACCGAAAAATAACTGGGGAGCTTTACTTTCTTTGCTTTTCCTCATTAGTTGTCGAAATAACTT CAAAAGTTAAAATCCTACACTTGTGCCTGATCTAGGTTACTAAGGATGTAAGTATGTTAGTATAAATGATATGATATATT TATAAATAAAATTATATATATTTGCAAATGTTTTGTTTGATTGGATTTGTTCGGTTGTGAAAATCAAATCCGAAAACGAT ACAATCCAATAAAAAAATTCAAATAACATGAACTTATTTGTTAGTCAGTCACATCAATCCCCAAGTTTATTGAGTAATTT TATTCAACAACTTACAATTTCTTGCAATAATCATATCTAGAGAAACCTTTTCAAATCAATAAATCAAATTCTAACTTAAT TCACATGGCAAGTTTTGACTAGCTGGAAGTGTTGAGGAAAAACTAAATGTCAAGGAATTTTTTTTGGGGGTCTTAAATCT GCTTTGCCCTTGCTTACATAGTCATTATTTTTTTGCATTGCAGGCAGCAAAATCTTGTTACATTCCTGCTCTACTAGGGC ATGCCATTGATGATGATTTTATACGTCCTCATCACTCAGATCGTATACTTGATGCTTACATGGTAATTATCTGTAGGAAT TCTTTTTATTTTTCAAAAAAATGATAAACTAGTTTACATAACTAAACTTCTTCCAGCTCTGTCGGGTTAGGTTAGACTAA GTCTTCATGTTATTTTCTAAACGGCTAAACCTCCATGCTTGCAACTTCCAAAATTATAAGACATGTCTTCTCAATAGTTT CTCAGACAGGGCATATTAGGGGTCTTCTATCTTCAATTTATCATTTTAACATGCCATTTCATGTGCTTTTTGTCTTATGG CTTTCTATGCTTTGTAGGGAGACAAAAGCATGATTAAATTTGAAGGCGATCACAACTCTCCGCGTCCTCAGTTCTATTTT GATTCCATAAACATCTTTTTTCACAATGTTTTGCAACCTCCAGAAGATGAGGTTGGGGAATCATTTTTTGACATTATGAA TGGTTACTTTGGTAAGGTAAGTTCACCATTCAGCTCTTTAGTTCCATTTTCGTCAATGCAAAATTCCATTCTTGAACATT TTCTTATAAGTTCAATGTTTTAACTCAGGACATTTGGAGATCTGTGCATGAATTAGGCGGCGGCAATGAACCATCATCTG AAGACAAAGGCATGGCTCAAATACCTAATCTCTCAGACATTTGTGTCTATGAGAACAGACATTTTGTGACCTCATTTATG AAATCTCTCATTGTTTCTTTGCTAATTGCAGAACCATCAAGTAGTGTTGTCGATGCCAATAAGCAAGTCCTTTCAAAAAG ACCAATGAGTAGGATGAAGGTTTGTATTTATTTACTCAGTTTATCATCAGAGGAGAAATGCTTGCACAAACAATGATTAG CTAATTCTGCTTGATATGCTTGCACAACAGGAAGAGAAATGTGATGAACTCTCCTCCTCCTCAGCTATGATTAGCTTTGA ACTATCAGATGGTCGTCTCTACGATCCCAGTGTTCCGACCACGTCAGATAATGATCAGTATGTGGAATTTCAACTTGATG ACCTTGCAGGCTTTCCATCCAATACAGTTGAAGAAGAAAAAGTGAGTCAACTTATTGGCTATCACATTGAAGTTTTGAAT ACATGGTAATGGTAGTACACATAAAATATGATTTTTTGGCTCTTATGGATTTGTCCATATTGTTCTTAGATGTTGATGGA AGCAGTGACAGAGTCATTGAAAGACCAGGAAATTAAAAATCCGTCGGAAGAACAACCACCATGTCTCTCATCAAGAGCAG CACCACCACCATCGACATTCGACACATCATCAGTCACTGAGTCTGGCAATAGTACAGAAAGTGCTTCTGCTTGTAGTGAT TCTTCTAGCCTAAAAAATTCATCAGAAAATGACATATCACATAAGACCAAAGCCACATTAACTGTCATTAGGAATCCATC AAACCATGTCGTGAACGGATTAATTCGCCGTTGGGACTTCAACTTTTTCAGAAACTGTCATAACCGATAAGATAAGAGTG CTTGTATATTCACAGGTGATTTTACATTGTGTGCTTGTTACTAAAGAAAAATATTATAGTTTACAAGATTTAGTATATGT TTGGATTATCATCTAACTAATCATCTACTATTATTTGACAGTTAAGAAAATTGTTGTTTTCTTCACTTGGATGACTATCA TGTGGGTTGGTGAACCAAAAGTATTTTGGTTTAATCTCACTTTTGATCTCTTATCTATCGCAATTGTGTGATTTGATTCA CTGATGTTTAAAACAAGCAATTTTGATCCCAAATTTTTT
CDS sequence (LotjaGi6g1v0300600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACAGCTTGCCAACTTCATCATTCGCCCACCAAGAGCTGAATATGATCCAAAAAATGATTTGCTGGAGCACGAGTT CATGTTAAAAGGGAAATTGTTTCAACGGAAGGATGTGGAGATAAAAAACAGCCATGGTATTGTTCTTCAATGCAGTCATT ACATTCCTATAGTCAGTCCTGATGGAAAGCCTCTGCCGTGTGTAATATATTGCCATGGAAACAGTGGATGCAGGGTAGAT GCCAGTGAAGCTGCTGTAGTTTTACTTCCTTCAAATATTACAGTTTTTACTATGGATTTCTCAGGATCTGGAATTTCTGG AGGGGAGCATGTCACTCTTGGTTGTAATGAAAAGGATGATCTGAGGGCTGTGGTCAACTATCTGCGGACCGATGGAAATG TCTCTCGCATTGGATTATGGGGACGCTCAATGGGTGCTGTGACTAGCCTGATGTATGGAGCTGAAGATCCTTCAATTGCA GGGATGGTTTTAGACAGTCCCTTCTCTGTTTTGGTTGATTTGATGATGGAACTTGTAGATACATACAGTGTTCGTCTACC AAAATTCACAGTGAAATTCGCAATTCAATACATGCGAAAAACAATCCAGAAGAAGGCAAAATTCGACATAATGGACTTGA ACACCCTTAAGGCAGCAAAATCTTGTTACATTCCTGCTCTACTAGGGCATGCCATTGATGATGATTTTATACGTCCTCAT CACTCAGATCGTATACTTGATGCTTACATGGGAGACAAAAGCATGATTAAATTTGAAGGCGATCACAACTCTCCGCGTCC TCAGTTCTATTTTGATTCCATAAACATCTTTTTTCACAATGTTTTGCAACCTCCAGAAGATGAGGTTGGGGAATCATTTT TTGACATTATGAATGGTTACTTTGGTAAGGACATTTGGAGATCTGTGCATGAATTAGGCGGCGGCAATGAACCATCATCT GAAGACAAAGAACCATCAAGTAGTGTTGTCGATGCCAATAAGCAAGTCCTTTCAAAAAGACCAATGAGTAGGATGAAGGA AGAGAAATGTGATGAACTCTCCTCCTCCTCAGCTATGATTAGCTTTGAACTATCAGATGGTCGTCTCTACGATCCCAGTG TTCCGACCACGTCAGATAATGATCAGTATGTGGAATTTCAACTTGATGACCTTGCAGGCTTTCCATCCAATACAGTTGAA GAAGAAAAAATGTTGATGGAAGCAGTGACAGAGTCATTGAAAGACCAGGAAATTAAAAATCCGTCGGAAGAACAACCACC ATGTCTCTCATCAAGAGCAGCACCACCACCATCGACATTCGACACATCATCAGTCACTGAGTCTGGCAATAGTACAGAAA GTGCTTCTGCTTGTAGTGATTCTTCTAGCCTAAAAAATTCATCAGAAAATGACATATCACATAAGACCAAAGCCACATTA ACTGTCATTAGGAATCCATCAAACCATGTCGTGAACGGATTAATTCGCCGTTGGGACTTCAACTTTTTCAGAAACTGTCA TAACCGATAA
Protein sequence (LotjaGi6g1v0300600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEQLANFIIRPPRAEYDPKNDLLEHEFMLKGKLFQRKDVEIKNSHGIVLQCSHYIPIVSPDGKPLPCVIYCHGNSGCRVD ASEAAVVLLPSNITVFTMDFSGSGISGGEHVTLGCNEKDDLRAVVNYLRTDGNVSRIGLWGRSMGAVTSLMYGAEDPSIA GMVLDSPFSVLVDLMMELVDTYSVRLPKFTVKFAIQYMRKTIQKKAKFDIMDLNTLKAAKSCYIPALLGHAIDDDFIRPH HSDRILDAYMGDKSMIKFEGDHNSPRPQFYFDSINIFFHNVLQPPEDEVGESFFDIMNGYFGKDIWRSVHELGGGNEPSS EDKEPSSSVVDANKQVLSKRPMSRMKEEKCDELSSSSAMISFELSDGRLYDPSVPTTSDNDQYVEFQLDDLAGFPSNTVE EEKMLMEAVTESLKDQEIKNPSEEQPPCLSSRAAPPPSTFDTSSVTESGNSTESASACSDSSSLKNSSENDISHKTKATL TVIRNPSNHVVNGLIRRWDFNFFRNCHNR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 423 | 423 | 2.3E-218 | – | |
| PANTHER | 1 | 423 | 423 | 2.3E-218 | – | |
| SUPERFAMILY | 8 | 286 | 279 | 3.88E-46 | ||
| Gene3D | 32 | 288 | 257 | 1.2E-38 | ||
| Pfam | 64 | 174 | 111 | 8.1E-11 | ||
| MobiDBLite | 312 | 352 | 41 | - | – | |
| MobiDBLite | 320 | 334 | 15 | - | – | |
| MobiDBLite | 410 | 472 | 63 | - | – | |
| PANTHER | 426 | 506 | 81 | 2.3E-218 | – | |
| PANTHER | 426 | 506 | 81 | 2.3E-218 | – | |
| MobiDBLite | 435 | 472 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0300600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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