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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0322500 |
| Transcript ID | LotjaGi6g1v0322500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Abscisic acid receptor; TAIR: AT2G40330.1 PYR1-like 6; Swiss-Prot: sp|Q8S8E3|PYL6_ARATH Abscisic acid receptor PYL6; TrEMBL-Plants: tr|I1M1T4|I1M1T4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0322500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63852051..63853169) extracted from Lotus japonicus Gifu genome v1.2.
GTTGTTAACAAGTGAAAAAAAAATAAAAAACTGAAGTGGTTGGCTTTCTCTGCAAAGATTGAAAATAGGACGTGGGACCC ACAATTTTAGTCCCTCTCTTCTCTACTTTTGAGGAACCAAACAAGGGAGGAAAGTCCAAATTCACCAGCTACTCCATTCC AAGCAGCAGCATCATCAGCAGGTCTATATATATGTACATGCTTTGCAGACAGAGCACTAAGCAATATTCAGAAACCCCAA GAACTCGAGCCATGCTTACTAACTACCACACCACTCACCTCTCATCAAACCAATGCGGCTCTAGCCTTGTTCAACCCATA GATGCACCGTTGCCTGTGGTCTGGTCCCTCATCAGACGCTTCGAGAAACCGCAGGGCTATAAGAGGTTTGTGAAGCACTG CTCCCTGCTAGCCGGTGATGGCAGCAGCACCGGGAGCGTGCGTGAGGTTACGGTAACCTCCGGGCTCCCGGCTGGAGTCA GTGTGGAGAGGCTGGACAAGCTTGATGATGATAAACATGTTCTCAAGTTTAGCATCATTGGAGGGGATCACAGGCTTTTG AATTATAGCTCCACCATTACTCTGCATGAGGAGGAGGAGGTTTATGGAGGGAAGACGGTGGCGATTGAGTCTTATGTGGT GGATATTCCTGAAGGAAGTAGCGGTGAGGATACTTGTTCTTTTGCTAATACCATTATTGGTTGCAATTTGAGGTCCTTGG CTAAGATCACTCAAGATATGGGTTTTAACAATAAGGCTACTTGACCTTCTTCTTGCTAATTAGAGGTGGATTTTAGGGTT TAATTATCCTAAGTAGATTGAGATTTGTAGGAATTTGGATCATCTGGAATAAGAAAACACATACATAGTTTGTTTGGGAG GACAATGACATAGTTGTTATCTCAAAGGAACTTACCATTATTGGAAGTAGGATGATGTACTACTACTAGTTACAATTAAG AACAAATCATGTGACTTTCTTTTTCTAGATGTGCAATTGTTTGTCTCAATTTAGTTTAATTATGTTTATTTCATATTCTC TTTGGATAATTTAGAATCTAATATACAAATAAAATGTGTATATATATCTTGATTCTGATTAGCAATTAACCTTGGAGGC
CDS sequence (LotjaGi6g1v0322500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACATGCTTTGCAGACAGAGCACTAAGCAATATTCAGAAACCCCAAGAACTCGAGCCATGCTTACTAACTACCACAC CACTCACCTCTCATCAAACCAATGCGGCTCTAGCCTTGTTCAACCCATAGATGCACCGTTGCCTGTGGTCTGGTCCCTCA TCAGACGCTTCGAGAAACCGCAGGGCTATAAGAGGTTTGTGAAGCACTGCTCCCTGCTAGCCGGTGATGGCAGCAGCACC GGGAGCGTGCGTGAGGTTACGGTAACCTCCGGGCTCCCGGCTGGAGTCAGTGTGGAGAGGCTGGACAAGCTTGATGATGA TAAACATGTTCTCAAGTTTAGCATCATTGGAGGGGATCACAGGCTTTTGAATTATAGCTCCACCATTACTCTGCATGAGG AGGAGGAGGTTTATGGAGGGAAGACGGTGGCGATTGAGTCTTATGTGGTGGATATTCCTGAAGGAAGTAGCGGTGAGGAT ACTTGTTCTTTTGCTAATACCATTATTGGTTGCAATTTGAGGTCCTTGGCTAAGATCACTCAAGATATGGGTTTTAACAA TAAGGCTACTTGA
Protein sequence (LotjaGi6g1v0322500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYMLCRQSTKQYSETPRTRAMLTNYHTTHLSSNQCGSSLVQPIDAPLPVVWSLIRRFEKPQGYKRFVKHCSLLAGDGSST GSVREVTVTSGLPAGVSVERLDKLDDDKHVLKFSIIGGDHRLLNYSSTITLHEEEEVYGGKTVAIESYVVDIPEGSSGED TCSFANTIIGCNLRSLAKITQDMGFNNKAT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 9 | 184 | 176 | 4.2E-70 | ||
| PANTHER | 16 | 185 | 170 | 1.1E-81 | – | |
| PANTHER | 16 | 185 | 170 | 1.1E-81 | – | |
| CDD | 35 | 178 | 144 | 1.75153E-32 | – | |
| SUPERFAMILY | 38 | 179 | 142 | 7.5E-30 | – | |
| Pfam | 39 | 178 | 140 | 5.1E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0322500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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