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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0335300 |
| Transcript ID | LotjaGi6g1v0335300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Polyphenol oxidase; Swiss-Prot: sp|P43309|PPO_MALDO Polyphenol oxidase, chloroplastic; TrEMBL-Plants: tr|A0A0B2PGN9|A0A0B2PGN9_GLYSO Polyphenol oxidase A1, chloroplastic; Found in the gene: LotjaGi6g1v0335300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:64970275..64972394) extracted from Lotus japonicus Gifu genome v1.2.
AAACACACAAGATAGAGAGCTAAAACATGGCATCTATGATTCTCTCATCTTCTTCACCTCTGTCTTTGGTATCCAATGTC CCTTCTTCCCTGCATCCTCCATTATTCTCTAAAAAATCCACCACAGCAAACCAATTAAACGCCACCAATATCATCATCAT CACGTAGCATGCAGCAGCAACACAACACCATCACCAAACACCAACAATAACAATATTGATGGTGCAGCTGGATCAGGACA TAGAAGAGATGTTCTGATTGGACTTTGTGGCGGTGCTGCCACCACTCTTTTCAACATTAACAATCCTTTAGCCGCCATTG CTGCTCCGGTGTTACCAGACTTTAACAATTGCGGTCCAGCAACACTACCTAAATGTCCAAGGCCTCCCTACGATTGCTGT CCACCACCAAATGTCTCAGGATCTGTCAAAACTTTCCGGCTACCGCTAGGCATTCGCCAATCCAGGCGGATAAGACTGCC GGCACATCAGCTGCCTCCTGAATATCTATCCAAATACAAGACAGCCCTTAACAGGATGAAAAATCTTAAAGATGATGACC CTCGCAGTTTCAAGAACCAAGCCAAAGTCCACTGCGCTTACTGTAACGGTGCCTATCACCAAATAGGGTTCCCTAATGTT GAATTTCCAGTCCATAAATCGTGGCTCTTCTTGCCTTTCCACCGTTGGTACCTCTATTTCTTCGAGAGAATCTTGGGTCA CTTGATCGAGGACCCGACCTTTGCCATTCCATTTTGGAACTGGGATGCTCCTGATGGCATGACAATGCCTTTTGATTTCA CTTGTGACCCTAATTCACCTCTCTATGACCCTCTCCGTAACACCAATCACATGCCAGCAACACTCATGGACCTTGGCCGC GGCCTAGAATGCTTGGGCAATGTCCACAAAGAATGCGTGCCCAATGTCCACACCAACCTCACAATCTTGCACAGAGTCTT TGTGGACAATGGAAAGACCCCAGGAGACTTCCTCGGTGGAGCTTACCGTGCTGGCGAAACTGCCTTCCGTAAAGGCTCTC TAGAGAATCTTCATGATAGTATCCATCAATGGACAGGTGATCCAAACCAGCCTAACGGTGAGGACATGGGAAGTTTCTAC TCTGCTGCTAGAGACCCCATTTTCTACGCTCACCATGCAAATGTTGATAGGATGTGGTCTGTGAGGAACGAACTTGGACT TGGTGGAACTACTTTCAATGACCCGGATTGGCTACAATCCGGCTTTTTCTTCTATGATGAGCATAAGCAACTTGTCCGTG TTAATGTCGGGGATTGCCTTTTCACGGCCGATCTCGGTTATGTTTACAAAGACGTGGACAATCTGTGGACAGACCCTAAA TATGCGCCTAAACCAGCCAAGTCAAGGGCTCAGAGGTTGGAAGAACAGGCTAAGCGCGCACCGGTCAGTTTAAGGAAGAA CTATGACGATGTCAAGTTCCCACTGGCTTTAGATGAGGCTGTGACTCTCGTGCTGAAGAGGCCCCAGAAATCGAGGAGCA AGAGCGAAAAGGAGGAAGTGCAAGAGGTTTTGAGTCTTGAAGGGATAGAGTTCGATAGCAGCATGTCTGTGAAGTTTGAT GTGATTATCGATGAAGAAGATTACAAGCTGGTGAACGCAGGGAATGCAGAGTTTGCAGGAAGCTTTTTGAGCGTGCCACA TTCTGGTGGTGATATGAACATGAATATGAAAACTGATTTCAGACTTGCTTTGACCGATTTGTTGGAACGTTTAGAAGCTG AGGATGATGAGAGTGTGCTGGTCACGTTGGTTCCCAGGGATGGGAGAGGGATCAAAATCCAAGGGATCAAGATAGAGCTT ATATAATTAAGTACTATAAGATTGAAAATTCCAACCATCCACTTGTATATGTGGTGGTACTGGTAATGCATGCATATGGG TGAGAAGAATATGATTTTCCAGTATCTATTTTTATGTTTTCTTTTAACTGTATTTTATATGTTTGAATAGGTGCCTGTGG CACCTTAAATCAAGTTAATAAATATCCATGTATTACGAGTCGGTAAGTATATAATTTTCCTATAAAATATTTTGTTCATT GGATGGTGAATATATATACAAAATAAATAAAACATCTAGT
CDS sequence (LotjaGi6g1v0335300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAAATCTTAAAGATGATGACCCTCGCAGTTTCAAGAACCAAGCCAAAGTCCACTGCGCTTACTGTAACGGTGCCTA TCACCAAATAGGGTTCCCTAATGTTGAATTTCCAGTCCATAAATCGTGGCTCTTCTTGCCTTTCCACCGTTGGTACCTCT ATTTCTTCGAGAGAATCTTGGGTCACTTGATCGAGGACCCGACCTTTGCCATTCCATTTTGGAACTGGGATGCTCCTGAT GGCATGACAATGCCTTTTGATTTCACTTGTGACCCTAATTCACCTCTCTATGACCCTCTCCGTAACACCAATCACATGCC AGCAACACTCATGGACCTTGGCCGCGGCCTAGAATGCTTGGGCAATGTCCACAAAGAATGCGTGCCCAATGTCCACACCA ACCTCACAATCTTGCACAGAGTCTTTGTGGACAATGGAAAGACCCCAGGAGACTTCCTCGGTGGAGCTTACCGTGCTGGC GAAACTGCCTTCCGTAAAGGCTCTCTAGAGAATCTTCATGATAGTATCCATCAATGGACAGGTGATCCAAACCAGCCTAA CGGTGAGGACATGGGAAGTTTCTACTCTGCTGCTAGAGACCCCATTTTCTACGCTCACCATGCAAATGTTGATAGGATGT GGTCTGTGAGGAACGAACTTGGACTTGGTGGAACTACTTTCAATGACCCGGATTGGCTACAATCCGGCTTTTTCTTCTAT GATGAGCATAAGCAACTTGTCCGTGTTAATGTCGGGGATTGCCTTTTCACGGCCGATCTCGGTTATGTTTACAAAGACGT GGACAATCTGTGGACAGACCCTAAATATGCGCCTAAACCAGCCAAGTCAAGGGCTCAGAGGTTGGAAGAACAGGCTAAGC GCGCACCGGTCAGTTTAAGGAAGAACTATGACGATGTCAAGTTCCCACTGGCTTTAGATGAGGCTGTGACTCTCGTGCTG AAGAGGCCCCAGAAATCGAGGAGCAAGAGCGAAAAGGAGGAAGTGCAAGAGGTTTTGAGTCTTGAAGGGATAGAGTTCGA TAGCAGCATGTCTGTGAAGTTTGATGTGATTATCGATGAAGAAGATTACAAGCTGGTGAACGCAGGGAATGCAGAGTTTG CAGGAAGCTTTTTGAGCGTGCCACATTCTGGTGGTGATATGAACATGAATATGAAAACTGATTTCAGACTTGCTTTGACC GATTTGTTGGAACGTTTAGAAGCTGAGGATGATGAGAGTGTGCTGGTCACGTTGGTTCCCAGGGATGGGAGAGGGATCAA AATCCAAGGGATCAAGATAGAGCTTATATAA
Protein sequence (LotjaGi6g1v0335300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNLKDDDPRSFKNQAKVHCAYCNGAYHQIGFPNVEFPVHKSWLFLPFHRWYLYFFERILGHLIEDPTFAIPFWNWDAPD GMTMPFDFTCDPNSPLYDPLRNTNHMPATLMDLGRGLECLGNVHKECVPNVHTNLTILHRVFVDNGKTPGDFLGGAYRAG ETAFRKGSLENLHDSIHQWTGDPNQPNGEDMGSFYSAARDPIFYAHHANVDRMWSVRNELGLGGTTFNDPDWLQSGFFFY DEHKQLVRVNVGDCLFTADLGYVYKDVDNLWTDPKYAPKPAKSRAQRLEEQAKRAPVSLRKNYDDVKFPLALDEAVTLVL KRPQKSRSKSEKEEVQEVLSLEGIEFDSSMSVKFDVIIDEEDYKLVNAGNAEFAGSFLSVPHSGGDMNMNMKTDFRLALT DLLERLEAEDDESVLVTLVPRDGRGIKIQGIKIELI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 436 | 436 | 2.9E-154 | – | |
| PANTHER | 1 | 436 | 436 | 2.9E-154 | – | |
| SUPERFAMILY | 1 | 271 | 271 | 2.35E-67 | ||
| Gene3D | 1 | 273 | 273 | 1.4E-81 | ||
| Pfam | 9 | 216 | 208 | 1.5E-31 | ||
| ProSitePatterns | 40 | 57 | 18 | - | ||
| PRINTS | 40 | 57 | 18 | 1.4E-16 | ||
| PRINTS | 71 | 76 | 6 | 1.4E-16 | ||
| PRINTS | 172 | 183 | 12 | 1.4E-16 | ||
| PRINTS | 199 | 217 | 19 | 1.4E-16 | ||
| ProSitePatterns | 200 | 211 | 12 | - | ||
| Pfam | 227 | 275 | 49 | 1.3E-17 | ||
| Pfam | 308 | 435 | 128 | 1.5E-43 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catechol oxidase activity | Catalysis of the reaction: 2 catechol + O2 = 2 1,2-benzoquinone + 2 H2O. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0335300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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