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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0335600 |
| Transcript ID | LotjaGi6g1v0335600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | COP1-interacting protein, putative; TAIR: AT1G61100.1 disease resistance protein (TIR class); Swiss-Prot: sp|Q8RX22|MIP1_ARATH MND1-interacting protein 1; TrEMBL-Plants: tr|I1M287|I1M287_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0335600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:64992117..64998154) extracted from Lotus japonicus Gifu genome v1.2.
TTTATAAGCAACAAAAAAAATTCACATAGTTTAAGAAATGTAGTTAAACTAGATAAAATGCATTAAATTTGTCTTAAATT AAAATGAACTTCCAAAACTACCCTTTGTTATTAGTGTTGGAAAGTGGAAAAGAGAGAGAATAATTAATGAGACACATTTT ACAAGTTAGAATTAATAAGGGCATCATTGGAAAAATTAATTAATATAGCTCAAACTTTCATTTGGTTCTTATAAAAAAGA CCAAGATTTTTCTTCTCTTTCATGCTTATAAATAGGACCGGAGGGAGGGAGTATCTTCTATTAAGTCATTCATATTCAAC TTGAGTGTAATGAAAGTAAAAGATCTTCATAAAAGTACATCTCCTAATAATTCCCAATAATTGAACTCTCAACTTTAGAA ATTCAAACAACTACCTTTAACTAGACAGACACTGCGGCCACCATCGGCAACTAGGTCTTTAAGAAATTGTGTTTACCTAT CATTATCTCAAAGATTAACAATAATCTTAGAATAAATTCCCACCCCAAATATTAATCTCATTTTTCTCTCTCTAGATTTC ACAGACATGACCAAAGAGTTAGCTAGATACGAAAACAAAGAAGAAGCTGTCACTGTTGCATGTGATTTCAGCGTTGAAAA ATCCTATAATATACAATAATATACAATAATAATGTCCCAGTTTGCACTCCATGTGCGATTCTTCTTCTTCTTCTTCATGT GCCTACTGCTACCTTTGCTTTCTCTCACCTCACATACATACTCAGCTTCCACATGACACTCCACTCTGTCTCTGTGACCA CCATCTTCACACCTTCACCACCATAACACCAACCTTAACACAGCATTTCAAGGTTCTTTTCTGACAGTCTCAGCTCACCA TGGATTCCAAGGCCATTCTTGATTATGCCCTGTTTCAACTCACCCCAACTAGAACCAGGTGAATCTCACACACCCTGTTT GCTACATGCTCTGATTTCATTAAGAAACTCTGCTTTTTTTACAACTGAATGAGTGATTTTTGTGTTTTGCTTTTGATGAT TTTGCAGATGTGAGCTTTTAGTGTTTTGTGGAACTCGTCGTGAGAAAATAGCTTCTGGGTTGTTTGAGCCTTTCGTTTCT CACCTCAAATTTGTCAAGGATGAGATCTCTAAAGGTGGATACTCGATTAAGCTTCTTCCTCCCACCACTAATGGTGCTTT CTGGTTCACCAAGGCCACGTTTGAGAGGTGCGCACCACTTGACTGCTTCTGATTTTGATTACCTTCTTACATGTTTTCAA TCAAATTTGAAGAACAGTGAATCAATTAACTCTGCTGTGAAAGTCCTTAACACTTGTTTGGGGGGTTATTTTACAGATTT GTGCGATTTGTTAGCACTCCTGCTGCTCTGGAGAGGTTTGTCAGCATTGAAAAGGAAATCCAGCAGATTGAAAATCAATT TGAAGCTAATGCTTTATCAATCTCAATTGCAAATCCGGATGAAGGTACGGTTAGGAGCTGAAACTTTGACATGTTTTGTG GATATTTGTATATGAATCTATTAGTATTTGGTGCTATAATTAAATTCCTAGAAACAGCACTTGTTGATTAATTTTCTTTC ACCTAATCATGAGCTGCTTAATGAGGCTAGTTTTCAACTGAAATCCTTTCATGCTTCAGGAAATATACCACAAACCAATG GCATCACAAGGAGGTTAAGTGATTCTACCAAGGTATTTTATTTCTTAAAAAATGTCAGAATTACTATATGGTCTGGTGAA CTTTTATTGATTAATGTTTTGTATTGGTTTCAGTTAAATGATGTACTTGACGGTGTTGACGATAAAGCAGAGGAAAGTTC AAAGTAAGGTTCTGCATCTTGAATGGTTTTTGTTGTTGAAAAGTAATTTCTTGCTTTCACCAGTTCACTTGAAACTATTC CTAACACTTTCAATTGCTATAATGATAAGGATTTCGCTGCAACGTCTTTTTGAGTCTCGGATAGCACTACTCCGGAAAGA GCAAGCAATGGCTTATACGCGTGGTCTTGTCGCTGGATTTGAGATCAATAGTATCGATGATCTCATATATTTTGCAAATG CATTTGGAGCATCGCGTTTAAGGTATGAACTGCAAAGATATTATGTCAGTCCTCTCATTCCTTACAAATCTAAGGATTAT TGAGAAACTATTCATGTGAACTTTTAAGTTTCCTTTAAACTCTAAATGTCTGTGCATCTTGTCTCCCTGACATGAAACCT TCACTCCTTGACCAAATACCTGTGCATCTTGTCTCTTTGACATGAAACCTTCACTCCGTTTTTAGACCAACTATAAGTGT TGATATTCAATGTATGCAGGGAAGCTTGCAATAAATTTAAGGAATTATGGAAGAAAAAGCATGCAGATGATCTTTGGATA AAAGAAGTAGCTGCTATGCAGTCAAGCTTACCACCAGCACTTCCATTTTCTGAAACATCAGGAATTATACTAGCAAATGA TATCAGTACTCCTTCTAGTGATGAAAATGTGTTTCTGGAAACTTCAAATTCAGCTACTTTAAACAAAAAAGAAGGTATTG TTTTATAGCTGTTTCTTTTTCCTTTATAGGCATCCAAGTCAAATCTCTGAATTTTGTTATTTTGTCATTAGCAAACCAAA TAATCAGTCATATGCCATATTATGCTTCTGTCTTGTCTGCTATCTTTTTTGGTTTAATCAAGCAGTTAATATTTTTGTTT CTTTTTCTGTATTTTCACCCTGTGAACTGCAATTTGACAAACTATCTTTAAGTTTAGGTCAAACCAACCTTTTAAGTGGA TAAAAAATAGCTTAAAAAACTCGATTGAGTTTATGTTAGGGAAGATAAAAGTCCAGGAAGAAAAGAGGGTACATATAAGA AATGATGAGAATAGTTTATTGAAATTTCTAGTCTAGTGTGATTTAAATGAGAAATGATCTTACCAAGGAATGTCATGTGC AGATGTGAACTTGCCTACACCAGATCAGAGACCACCGCATATGGCAAATGTTCATATGGCAATGCCCTGGCCTTACAATT TACCTCCATATATGTATAATATGCAAAATCCTAATCAGCAAATGCCCTCATACCAAGGATATCCTTTGGCTAATATGCAG TCTGTTCCTCCTTACCATCAAAATATGCAATGGTCTTCTAACCTGGGAGTGAATCAGAGATCATCAGCAACGAGAAAGGA GAAATCTCATCATAAGAAAGGACCAGAAGAATATGAAGACCAGCTGACAGAGTCCAGTGACCCTGATTCTGAGAGTGAAT CTAATTCAGATAACCAGAAGAACTCAAATGATTCTTTGAACGAAGATGTAAAGAGGAAAAAACACAGAAGGAAGTCATCT GGAACAGTCGTGATTCGTAATATCAATTACATCACTCCAAATAGGAGAAATGGGAATGAGGGCGGAGTCTCTGATGAATC TTCTTTAGAAGATGACATCGATGAAGAAGCCATAAAAAATAAGGTCGGTGTTGCACTCGAATCCTTGCAAAAGGTTCATA AAGTTGAAAAGCGTTCTAATCGAAAAAAAGCACTGGCCCAGCGCAATGCAATTAGAAATGGTGATGCTATTGAGGAGGAT CTCACTGAAAACTTGACTGATGCATCTGAAGGAGGGAACAAAGATAAGAACTGGGATGCATTCCAGAACCTTTTGAAGAT AGATGAGGAGACTGGGATTGATGGATCTGGAAGGATGCAGCCAAACGATGTTCAGGATGAACATTTTGTGGTGAGAAACT CAGAAGAAAGAACTCCATATTCCGCTAGTTCAGCTCAAAACTTGGATTTCAAGGAAGTTCTGAAGAATCCTAAAGTTGCA AATGACTCCTTCATTGTCGCTCAGAGAGATGGAGGAAATGAAGGTAGATCCAAGATGGATGAGTATGTAGACAACTGTGG TCCAGTTACAAAGAGCAGAGATAATATGGGTGAAGAAATATTGTTATCACACAGAACAGGAGAACCTGGAAATGAGTTTG GGGATCCGTTATCTACTTTTGCTGCTGATTCATTAGGAACCAAAGGCAGAACATCAGAAGATTGGTTTATTGTTGATAAT ATGGAAAAGATGAGGAGCGCTGATACCACCATCACGCCCAAAGTGTTTGATGATGATTACACTTTATCATCAGTGAATGG TTACTCCCATGCTGAAAAAAGAAAAGAAGGAACTCTGGTTGATGATTCCTTCATGATACAGGGTCAATTGGTGGATAATA GTCTTTCTGACACACAATGGAGGACAGACCTAAGTATGGTTGAAGATCTAACTCCTGCCAACAAGCTGGAAAGTGACACG GCTGCTTCAAATGAGAAGAAAGCATTAGCAAACAACCAAGAGCCGAATGACCTCTACGTAGTTCTACAACGGGATTCAGG ATTGGATTCTGTCGAGGCCTCTCGGTCAATGGACTATGAAGTTGACTTTTCTTTCTCAGAACCTGATAGAAGATCCTCTG TTGATGATTCACCTAATGTGAGTAACAACCTTTCTGGTAGTCCTGAGAAAACCAGCATGAATAAAAGCAAAGTTTCAGCT ACAAGAAATTCTGAGAAAGCTTTGCGCGGATCCTCTGGGAAGGGAAAGCCTGAAATAATATCTAGGAACAGAAAGCCATC TCTCCCAAGTAGGCCAGTAGTTCAGAAGAGCAAAAGGGAGCAGGTATAGTGAATTTTCAATGTTTTTGAGTACTTTTTAT GCTTTGAACACCTACAACTTTTCTCATAACATTCAGTAATTCTAACTCCTAATGATCTGTGATGGTAAATAGGAAGATGA AATAAGGAAGAAGATGGAAGAAAAGGCGAATGAACGCCAGAGGAGAATTGCTGAAAGAACTGCATCCTCTGGTGTTGCTA GAGGCGTGCCCAAAAAAGACCAAATTGAAGGCAAAACAGCAAGGGTTTCTACCACTAAAGTGTCAAGAGTAAGAGTCAGT CCCTAAATGTGACAAACAGAATTAGTTCTGTCAAGGTAAGGACAATTTAGCAAAGCTTGTCAACATTTAATGAAGATGCT GCTCTTACAAGGTACACAGAGACTCTGCATGGTGAAGTGTATTTAAATAAATGTTGATTAAATTGAAATGAATAGTTTCA TTTTGTATAAACTCTTAATTCATTGGATGTATTGAGGCCAATAATACTCTAAAATATAGGTTTCTTTTGATTCATAGTTA TATATATATCTTTGTCCTCAAGAGTGTACCAAGTGCTTGAAAGGAGCCAAATTCTGGTTGAATATTGAATCTTGAAAGTT GTTATTTTGTTGGATAAATGAAAGTTTCATTTTTATTTTGTCTCTTAGATTAAGAAACCTTAAGGACAGTCCAACTTGTA TCAAGGGAATCTCACTCAAACTCCTAAAAGAGGGGTATAGCTGTTCATGGAATGATAAACACTACTACTAACAAGACATA CTTGCTTAAACACTTGAAATTAACAGCACTAATAGTACTGTACCAACACTAATGGCTTGCTATCAGCCATAAACATCTCT CATGACGCTCGGCCTCAGGTCAACGCCTCCCCAAGTAATGAATGTAGCAAATGCGCAAAACTTCTGTATGAAATGGAGTG TGAGAACTTGTTTATTGTGCTTTGACTTTTATTAACTATTTAATTAGTATTCTTAATGACACTAACCCTATATTATTATT CCAAAACTGAAATTTTCGTCTTCCACTCTTTCTACATTAGATGGTCTTTACAACGAAGGGCTACTTTATAGATTGTTTTA TCTGATGAATGCCTACTTTAGACAATGTTTTACCAGGCATTATTTAATGGTTCATTATAAGGTAGCGTTTGGCAACGGAA CGGAACAGGACAGAACGGAACATGACAATAATGTTCTGTGCAGTGTGTTTGGTAAACATAGCACAGAACAGGACAATTAT GTTTTGTTCTGTGTTTGGTGCACGTGAAACAGAACAGAACCATACAGTTAATTACACATATACCCTTATGTGTTATATTT AATATTATATAACAATTCACTGATAAACTATCATCAAA
CDS sequence (LotjaGi6g1v0335600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCCAAGGCCATTCTTGATTATGCCCTGTTTCAACTCACCCCAACTAGAACCAGATGTGAGCTTTTAGTGTTTTG TGGAACTCGTCGTGAGAAAATAGCTTCTGGGTTGTTTGAGCCTTTCGTTTCTCACCTCAAATTTGTCAAGGATGAGATCT CTAAAGGTGGATACTCGATTAAGCTTCTTCCTCCCACCACTAATGGTGCTTTCTGGTTCACCAAGGCCACGTTTGAGAGA TTTGTGCGATTTGTTAGCACTCCTGCTGCTCTGGAGAGGTTTGTCAGCATTGAAAAGGAAATCCAGCAGATTGAAAATCA ATTTGAAGCTAATGCTTTATCAATCTCAATTGCAAATCCGGATGAAGGAAATATACCACAAACCAATGGCATCACAAGGA GGTTAAGTGATTCTACCAAGTTAAATGATGTACTTGACGGTGTTGACGATAAAGCAGAGGAAAGTTCAAAGATTTCGCTG CAACGTCTTTTTGAGTCTCGGATAGCACTACTCCGGAAAGAGCAAGCAATGGCTTATACGCGTGGTCTTGTCGCTGGATT TGAGATCAATAGTATCGATGATCTCATATATTTTGCAAATGCATTTGGAGCATCGCGTTTAAGGGAAGCTTGCAATAAAT TTAAGGAATTATGGAAGAAAAAGCATGCAGATGATCTTTGGATAAAAGAAGTAGCTGCTATGCAGTCAAGCTTACCACCA GCACTTCCATTTTCTGAAACATCAGGAATTATACTAGCAAATGATATCAGTACTCCTTCTAGTGATGAAAATGTGTTTCT GGAAACTTCAAATTCAGCTACTTTAAACAAAAAAGAAGATGTGAACTTGCCTACACCAGATCAGAGACCACCGCATATGG CAAATGTTCATATGGCAATGCCCTGGCCTTACAATTTACCTCCATATATGTATAATATGCAAAATCCTAATCAGCAAATG CCCTCATACCAAGGATATCCTTTGGCTAATATGCAGTCTGTTCCTCCTTACCATCAAAATATGCAATGGTCTTCTAACCT GGGAGTGAATCAGAGATCATCAGCAACGAGAAAGGAGAAATCTCATCATAAGAAAGGACCAGAAGAATATGAAGACCAGC TGACAGAGTCCAGTGACCCTGATTCTGAGAGTGAATCTAATTCAGATAACCAGAAGAACTCAAATGATTCTTTGAACGAA GATGTAAAGAGGAAAAAACACAGAAGGAAGTCATCTGGAACAGTCGTGATTCGTAATATCAATTACATCACTCCAAATAG GAGAAATGGGAATGAGGGCGGAGTCTCTGATGAATCTTCTTTAGAAGATGACATCGATGAAGAAGCCATAAAAAATAAGG TCGGTGTTGCACTCGAATCCTTGCAAAAGGTTCATAAAGTTGAAAAGCGTTCTAATCGAAAAAAAGCACTGGCCCAGCGC AATGCAATTAGAAATGGTGATGCTATTGAGGAGGATCTCACTGAAAACTTGACTGATGCATCTGAAGGAGGGAACAAAGA TAAGAACTGGGATGCATTCCAGAACCTTTTGAAGATAGATGAGGAGACTGGGATTGATGGATCTGGAAGGATGCAGCCAA ACGATGTTCAGGATGAACATTTTGTGGTGAGAAACTCAGAAGAAAGAACTCCATATTCCGCTAGTTCAGCTCAAAACTTG GATTTCAAGGAAGTTCTGAAGAATCCTAAAGTTGCAAATGACTCCTTCATTGTCGCTCAGAGAGATGGAGGAAATGAAGG TAGATCCAAGATGGATGAGTATGTAGACAACTGTGGTCCAGTTACAAAGAGCAGAGATAATATGGGTGAAGAAATATTGT TATCACACAGAACAGGAGAACCTGGAAATGAGTTTGGGGATCCGTTATCTACTTTTGCTGCTGATTCATTAGGAACCAAA GGCAGAACATCAGAAGATTGGTTTATTGTTGATAATATGGAAAAGATGAGGAGCGCTGATACCACCATCACGCCCAAAGT GTTTGATGATGATTACACTTTATCATCAGTGAATGGTTACTCCCATGCTGAAAAAAGAAAAGAAGGAACTCTGGTTGATG ATTCCTTCATGATACAGGGTCAATTGGTGGATAATAGTCTTTCTGACACACAATGGAGGACAGACCTAAGTATGGTTGAA GATCTAACTCCTGCCAACAAGCTGGAAAGTGACACGGCTGCTTCAAATGAGAAGAAAGCATTAGCAAACAACCAAGAGCC GAATGACCTCTACGTAGTTCTACAACGGGATTCAGGATTGGATTCTGTCGAGGCCTCTCGGTCAATGGACTATGAAGTTG ACTTTTCTTTCTCAGAACCTGATAGAAGATCCTCTGTTGATGATTCACCTAATGTGAGTAACAACCTTTCTGGTAGTCCT GAGAAAACCAGCATGAATAAAAGCAAAGTTTCAGCTACAAGAAATTCTGAGAAAGCTTTGCGCGGATCCTCTGGGAAGGG AAAGCCTGAAATAATATCTAGGAACAGAAAGCCATCTCTCCCAAGTAGGCCAGTAGTTCAGAAGAGCAAAAGGGAGCAGG AAGATGAAATAAGGAAGAAGATGGAAGAAAAGGCGAATGAACGCCAGAGGAGAATTGCTGAAAGAACTGCATCCTCTGGT GTTGCTAGAGGCGTGCCCAAAAAAGACCAAATTGAAGGCAAAACAGCAAGGGTTTCTACCACTAAAGTGTCAAGAGTAAG AGTCAGTCCCTAA
Protein sequence (LotjaGi6g1v0335600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSKAILDYALFQLTPTRTRCELLVFCGTRREKIASGLFEPFVSHLKFVKDEISKGGYSIKLLPPTTNGAFWFTKATFER FVRFVSTPAALERFVSIEKEIQQIENQFEANALSISIANPDEGNIPQTNGITRRLSDSTKLNDVLDGVDDKAEESSKISL QRLFESRIALLRKEQAMAYTRGLVAGFEINSIDDLIYFANAFGASRLREACNKFKELWKKKHADDLWIKEVAAMQSSLPP ALPFSETSGIILANDISTPSSDENVFLETSNSATLNKKEDVNLPTPDQRPPHMANVHMAMPWPYNLPPYMYNMQNPNQQM PSYQGYPLANMQSVPPYHQNMQWSSNLGVNQRSSATRKEKSHHKKGPEEYEDQLTESSDPDSESESNSDNQKNSNDSLNE DVKRKKHRRKSSGTVVIRNINYITPNRRNGNEGGVSDESSLEDDIDEEAIKNKVGVALESLQKVHKVEKRSNRKKALAQR NAIRNGDAIEEDLTENLTDASEGGNKDKNWDAFQNLLKIDEETGIDGSGRMQPNDVQDEHFVVRNSEERTPYSASSAQNL DFKEVLKNPKVANDSFIVAQRDGGNEGRSKMDEYVDNCGPVTKSRDNMGEEILLSHRTGEPGNEFGDPLSTFAADSLGTK GRTSEDWFIVDNMEKMRSADTTITPKVFDDDYTLSSVNGYSHAEKRKEGTLVDDSFMIQGQLVDNSLSDTQWRTDLSMVE DLTPANKLESDTAASNEKKALANNQEPNDLYVVLQRDSGLDSVEASRSMDYEVDFSFSEPDRRSSVDDSPNVSNNLSGSP EKTSMNKSKVSATRNSEKALRGSSGKGKPEIISRNRKPSLPSRPVVQKSKREQEDEIRKKMEEKANERQRRIAERTASSG VARGVPKKDQIEGKTARVSTTKVSRVRVSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 901 | 901 | 0.0 | – | |
| PANTHER | 1 | 901 | 901 | 0.0 | – | |
| MobiDBLite | 350 | 442 | 93 | - | – | |
| MobiDBLite | 414 | 436 | 23 | - | – | |
| MobiDBLite | 777 | 910 | 134 | - | – | |
| MobiDBLite | 787 | 820 | 34 | - | – | |
| MobiDBLite | 847 | 874 | 28 | - | – | |
| Coils | 850 | 871 | 22 | - | – | |
| MobiDBLite | 896 | 910 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0335600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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