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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0338600 |
| Transcript ID | LotjaGi6g1v0338600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sphingosine kinase, putative; TAIR: AT4G21540.1 sphingosine kinase 1; Swiss-Prot: sp|Q8L7L1|SPHK1_ARATH Sphingosine kinase 1; TrEMBL-Plants: tr|A0A072V3V9|A0A072V3V9_MEDTR D-erythro-sphingosine kinase/diacylglycerol kinase; Found in the gene: LotjaGi6g1v0338600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:65289127..65294129) extracted from Lotus japonicus Gifu genome v1.2.
TGCCATCTTAATCTGTTTGGCGTCAAAGTTAAGGCTGCTAGACAAGGCAACTAATCTGTTTGAATTAGTTCACATATTCT AATTTTAGCACTTGGTCATATCTATCCGCATCCTTTACCATATTTATTTAAATTAAATATAATTACATATAAATTACAAT TATTATTTCCAAAAACATCGTCCAAACCCGGATTTGTTATCGAACCGGCTGAGATTGCTCTTGTGGGCCCACCTTCCGAC GGTGGCAAATGGATCTTTCCGGTCACCACCGTCCCTTAATTTCGGACCGCGTCACCGTCAACGGCACCGTCACGCCGCTT GCTCTGCTCGCTGACGGCAGGCTATGGTGGTCGGAGGGAATCCAACGCTGCATCTCCGTCGAGAAAGAGCTTCTCGGCTT CGTCTCCACTGGCTCCTACATCAAGCTCAAGACCCTCGTCGAGGCACGAGATGGGTGCTGCACCACCGGGGCTCCAGGGA GACTCGTTCGTAACGACGTCGTTTTTCAACCATCCTCCAATGAGTCGCACACGCTCTGGTGTAACAAGCTTCGTGAATTC ATCGATTCTCTCGGTATTCTTCATTTCCATTCGTGAATTCATCGTTAACTAATCGTGTTAATGGTTATTGTTTACCTATT GAGCTCCGAATTCTTCAAATTTAGGTCGCCCTAAGAAGCTGTTTGTTTTTGTTAATCCGTTTGGGGGGAAGAAATCTGCT GTGAAGATTTTCGATGATGAAGTCAAACCTCTTCTTGAAGATGCTCAAATCCAATTTACGCTCCAAGGTGCTTTTTCTCA TTCTTCAACCATGTTTCATTCTTATTGCTATTGACTTTATGTATATGTTTATTTATTTATTTTCGTTTGGTTTGTTGAAA TATCAGTAGTATCCCTCATAATTTAGTTTTCGATCGAGCTCAATGGCGTAGTGCGATCCATATAGCTGACCTCTCTTAGT GCGATAAGCCTATTGTTGTTGTTGTTGTTGATTTAGTGTGTGTTGTTTTGTATTCCTCAGAAACTAAACATCAGCTCCAT GCCAAGGAAGTTGCTCATTCCCTAGATATTGCAAAGTATGATGGGATTGTTTGTGTTAGTGGAGATGGACTTTTGGTTGA GGTTGGTAACACATTTTATGCACTACATGTTTATAAATTATAATGCTAATTGCAAAATACTGTGTTGCACTGAGAAATAA TTTGGAAGTCAGCTAGCAGAAATGCGGGCCACTTCTCGGTTTCGCAATGTAACTTGTGTATTCTAGACTACATTTGCACT GGCTTGCTTTTGACATCGTTGTCTCTGTTTATTTGTTGTTGTTCCTAATCTTTCAAACTTCACACATACATTTTAGTAGG TTGTAAATGGATTTCTTCAAAGAGCGGATTGGGACACAGCAATAAAGATGCCCCTTGGAATAGTTCCTGCAGGTTTGTTA CTTTTTTTTATTGATTTGGATTTATCTAATTAGACTTCATTACTTTAAATCATTTACTGAGCAAGGGCATGAAACCATTG TCTAATAATGGTTGTTTACCAGGAGTGGTAAGATGGGGCTAATACTATTGGCTGGGTTTTATGTACAAAGTTTTTCATTT GTTTATCAGTAGATAAGTTTATGGGTAACTATACAAGTTTAGTTATACCAAGCTAATAAGTTCGCCATTGCTTTGAAGGT ACGGGAAATGGCATGGCAAAATCTCTTCTTGATTCAGTTGGTGATCCGTGTGCAATAGCCAATGCTGTTCTTGCCATTAT ACGAGGTTTCAATCCATTTATGTCATTCAAACATGCCATATCCTGTTTTTTTTTACCCTTTTTCTGTGTTGTTAAGTATA GTCTGTATTTTAAATACTAACAGGTCATAAACGACTGCTTGATGTGGCTACCATCACACAAGGGGAAACCAGATTTTTCA GTATATTGATGCTTGCATGGGGTAATTACTCTCACCATATATTGCATTATGCCAACTAGGTGGTGGCGGATGTTCTAAAA ACCTGAAACATCTAGGCTATTGGTTTCTTACTTTTTTCTTTTTTGTTTATTTGTCCCAGACTCGGAGCTACATATGGTTC TGAGTTCTGATGATGCATTCACTCTTACATAAATATTATATGATATCATTGAGGCTATTATTCTATTTCAGGTCTCATTG CAGATATTGACATTGAATCTGAAAAATATCGGTGGATGGGAAGTGCTCGTCTAGATTTTTATGTTAGTAAGCCCTTTTAT AATGTTGACCACACATTTTATTTTTATGCTTTTCTCTTACTAATATGTGCGTCTGTTAAATGGATTAGTGTTAGAATATC ATGTTAACACTTGGATTGAAGGCAAAAATATAAACCGGAAAAACATTTAATCATTGAATTGCAATTTGCAAGTTATCTAT TTTATTCGTGGGCATTTTTACAATATGACTTTCTGTAGAATGCTTTCAAGTACGTAGTTTACAAAATACACTTTTGATTT CTAGCACTAGAATCAGATATAAACTAATAGCAAAACGCACTCGATGAACCAATCTAGTCCACTGGTAATTCTTTCTCCCC TCTCTTTGTTTTTCTCAGTTTCCTGAAAGTTTCTGTCTACTTGGATTTTTTTAGGGTCCATTTTTTCTGTGTATGACTCT GAGGAAAGTTCCAAATATAAAGAGAAAGAGAAATGCATCACGGCTAAGGACACTTGCCTTTGTTTTTAGGAGAAGATTTC TTACTTAAAGTTAAATTTCTATTTCGTGTAGTTCTGTTTTGAAGGGTGATCCTGACCTCTATATGTTATTGTAACATAAA TGGCCTTTTAGTGGGGAACTTGATTCTAAGATGTAACATAAACTTGTATTGCAAATTTGCAATTGCCAATTAGTATAATT GCTAAGTGCAAGACGTTAATCATCAATATTTGTTTTTTCACCGCTTTCCTGCTGTAGGGTCTCTGTCGATTATTGAATCT GAGGCAATACAATGGATGTGTTTCTTTCGTGCCTGCACCTGGGTTTGAGGATTATGGGGAGCCGACTACTTACCCTGGAA AACCTACCAGCAAAGGTGACAGCAGTGATCCCAGTGAAGCGGAGCACGTTAATTTGCAAAGACTTTGTTATACTTATCAA GGACCTGAAATAAACTTGGAAAATCTGAATTGGAGAGTTATAAATGGACCCTTTGTTTCTGTCTGGCTTCACAATGTACC TTGGGGTGCAGAAGACACAATGGCAGCACCTGATGCAAAGGTCAGTTTTTGTGATTAAAGAATTTGATATTAAGCATATA ATGTCACTCACACTCCCCTGTATTTTGATAGTGCATCAGAGTTAAGTTGATGAAATGTGTATTACTCAACACAAATAACA TGCAATACAGCCATTTGCTGTCCCAAATACAAAAGTCTCCTGCTGAGAACTCTCTTTCCATAATTTACAAATAACAACTT ATAATTACCCACCCTAAATCAAATATATTCCTAAAACAGCACTATGATCAGTAGTTTTCGACAAACAACTGCCATTAAGT AGTTTCCTATGATCAAATATACTCCTAAAACAGAACTGTTGAACTGCCAGTGATCAAAATATTCACTCTCCTAAGTTTCT CCCTAGTGAAGGACTATCTATTAGAGAGACAGACAGACACACAAACACATATATAAGCATTGTCACTTAATATGATTGGT GTTGTTTACTTTATGAAGCTGAGCCTGACACTTCTTTTGTCATTGTAATTTGGTAAGTACAGTTTTCTGATGGTTATCTG GACTTGATCATTACGAAGAATTGCCCTAAGTTACAATTGCTGTCAATGATGTCAGAGTTGAATAAGGGAGGACATGTAAA ATCCCCATATGTCACATACCTAAAGGTGTGATCACCGATATCTCTTTTTTAGCAGTTACATTGAACTTTGGAAGTTTCTC TGCATTGGCATATATTTGCTTAACAAAATTTGCTAATCTACGTTTTTATGTATCTTGCCACCAATTGCAGGTGAAGGCTT TCAGCTTGGAACCTGGTCCACGCACCAAGGACAAAGAAAAGGAGGGGATTATAGATTCAGATGGTGAGGTACTGGCAAGG GGCAAAGGAACTTACAAGTGTGAGCAGAAGTCTTTGATGGCCTATGATAAATTGCAGATAACAGTAGATAAAGGTTTAGC CACACTTTTTACCCCTATATAATACTCTTGGTTTAATTATTTTCCTCCTCCAATTCCATTCCATGCAGATTGTTTCACGT GTTGTTACAAAATATTAATCATATCCTTCGATGGGTAATTTATCCTGTACAGCACCAGATATATTGAAATGAGTATAGCT TTTATCAAGTGTCCCTTGTAACGCCAAATATTGTTTTATTATACAAAAAAACATTACGATTTTTTTCATTTGGTCCCTCG ATTTCTATTTTCTTCAAACGAGATCTCCGTGAATTATATTTGCTTACTTAATGATCCTGCCATTAGCTCTTCTTATTCGG AGAAGTTGATCCTACATGACAATCTTGTTTGGTACATGAATTGGCATAATTGAAGCTTATCAACTGGTGTAGTGAAATTT TCCAAATATCATCCTCACTTAACAAACTCTAACCCCAACATTCTCACGCTCAATATATGAAATGCACAAGAAGTCGGTGA AGTAGAGCAAGACAAGGTCTTGTATATGATAGGCTCAAGCTCAACCCCCACTCATCACATTGGCATGAGGTAGATGTGCT GGGATATTACCTCCTCACCCTAAGTTTTCAAGGAAAAACAAAAAGAAATCCACATTAAACTGAGATAGAAAAGAGCACAA TCCACTATATAGAAATTGTTCCAAGAGGATGGAGAGAGAACATAACGATGAATACGGTGAAGATGAGGTTAGTATGAGTC ATGGCTATGTAGAAGGCGGCGTACCGAAGTAGTCATTCAAAAAAATTTATTGGCATTCAAAGGGCTGTGGTGGTAGAGCT GAAAATTCCATTTGCTATTTTTTTTTTGAAGAGAACAAAAAAA
CDS sequence (LotjaGi6g1v0338600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCTTTCCGGTCACCACCGTCCCTTAATTTCGGACCGCGTCACCGTCAACGGCACCGTCACGCCGCTTGCTCTGCT CGCTGACGGCAGGCTATGGTGGTCGGAGGGAATCCAACGCTGCATCTCCGTCGAGAAAGAGCTTCTCGGCTTCGTCTCCA CTGGCTCCTACATCAAGCTCAAGACCCTCGTCGAGGCACGAGATGGGTGCTGCACCACCGGGGCTCCAGGGAGACTCGTT CGTAACGACGTCGTTTTTCAACCATCCTCCAATGAGTCGCACACGCTCTGGTGTAACAAGCTTCGTGAATTCATCGATTC TCTCGGTCGCCCTAAGAAGCTGTTTGTTTTTGTTAATCCGTTTGGGGGGAAGAAATCTGCTGTGAAGATTTTCGATGATG AAGTCAAACCTCTTCTTGAAGATGCTCAAATCCAATTTACGCTCCAAGAAACTAAACATCAGCTCCATGCCAAGGAAGTT GCTCATTCCCTAGATATTGCAAAGTATGATGGGATTGTTTGTGTTAGTGGAGATGGACTTTTGGTTGAGGTTGTAAATGG ATTTCTTCAAAGAGCGGATTGGGACACAGCAATAAAGATGCCCCTTGGAATAGTTCCTGCAGGTACGGGAAATGGCATGG CAAAATCTCTTCTTGATTCAGTTGGTGATCCGTGTGCAATAGCCAATGCTGTTCTTGCCATTATACGAGGTCATAAACGA CTGCTTGATGTGGCTACCATCACACAAGGGGAAACCAGATTTTTCAGTATATTGATGCTTGCATGGGGTCTCATTGCAGA TATTGACATTGAATCTGAAAAATATCGGTGGATGGGAAGTGCTCGTCTAGATTTTTATGGTCTCTGTCGATTATTGAATC TGAGGCAATACAATGGATGTGTTTCTTTCGTGCCTGCACCTGGGTTTGAGGATTATGGGGAGCCGACTACTTACCCTGGA AAACCTACCAGCAAAGGTGACAGCAGTGATCCCAGTGAAGCGGAGCACGTTAATTTGCAAAGACTTTGTTATACTTATCA AGGACCTGAAATAAACTTGGAAAATCTGAATTGGAGAGTTATAAATGGACCCTTTGTTTCTGTCTGGCTTCACAATGTAC CTTGGGGTGCAGAAGACACAATGGCAGCACCTGATGCAAAGTTTTCTGATGGTTATCTGGACTTGATCATTACGAAGAAT TGCCCTAAGTTACAATTGCTGTCAATGATGTCAGAGTTGAATAAGGGAGGACATGTAAAATCCCCATATGTCACATACCT AAAGGTGAAGGCTTTCAGCTTGGAACCTGGTCCACGCACCAAGGACAAAGAAAAGGAGGGGATTATAGATTCAGATGGTG AGGTACTGGCAAGGGGCAAAGGAACTTACAAGTGTGAGCAGAAGTCTTTGATGGCCTATGATAAATTGCAGATAACAGTA GATAAAGGTTTAGCCACACTTTTTACCCCTATATAA
Protein sequence (LotjaGi6g1v0338600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLSGHHRPLISDRVTVNGTVTPLALLADGRLWWSEGIQRCISVEKELLGFVSTGSYIKLKTLVEARDGCCTTGAPGRLV RNDVVFQPSSNESHTLWCNKLREFIDSLGRPKKLFVFVNPFGGKKSAVKIFDDEVKPLLEDAQIQFTLQETKHQLHAKEV AHSLDIAKYDGIVCVSGDGLLVEVVNGFLQRADWDTAIKMPLGIVPAGTGNGMAKSLLDSVGDPCAIANAVLAIIRGHKR LLDVATITQGETRFFSILMLAWGLIADIDIESEKYRWMGSARLDFYGLCRLLNLRQYNGCVSFVPAPGFEDYGEPTTYPG KPTSKGDSSDPSEAEHVNLQRLCYTYQGPEINLENLNWRVINGPFVSVWLHNVPWGAEDTMAAPDAKFSDGYLDLIITKN CPKLQLLSMMSELNKGGHVKSPYVTYLKVKAFSLEPGPRTKDKEKEGIIDSDGEVLARGKGTYKCEQKSLMAYDKLQITV DKGLATLFTPI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 489 | 481 | 5.3E-198 | – | |
| PANTHER | 9 | 489 | 481 | 5.3E-198 | – | |
| Gene3D | 97 | 241 | 145 | 7.5E-48 | ||
| ProSiteProfiles | 109 | 251 | 143 | 41.63 | ||
| SUPERFAMILY | 110 | 471 | 362 | 1.72E-65 | ||
| Pfam | 113 | 247 | 135 | 2.5E-31 | ||
| SMART | 113 | 245 | 133 | 1.2E-9 | ||
| Gene3D | 244 | 471 | 228 | 7.6E-59 | – | |
| MobiDBLite | 314 | 333 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | NAD+ kinase activity | Catalysis of the reaction: ATP + NAD(+) = ADP + 2 H(+) + NADP(+). | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Expression pattern of LotjaGi6g1v0338600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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