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LotjaGi6g1v0346300.1

Overview

Field Value
Gene ID LotjaGi6g1v0346300
Transcript ID LotjaGi6g1v0346300.1
Lotus japonicus genome version Gifu v1.2
Description Inorganic pyrophosphatase; TAIR: AT5G09650.1 pyrophosphorylase 6; Swiss-Prot: sp|Q9LXC9|IPYR6_ARATH Soluble inorganic pyrophosphatase 6, chloroplastic; TrEMBL-Plants: tr|I3SKT1|I3SKT1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0346300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:65860211..65863579) extracted from Lotus japonicus Gifu genome v1.2.

CCCACATGAATTTAACCAATCAATCAATAATAAGAGAATCTTGTACTAAAGAAATGGTTAAAATGAGGTTGCATGAAATA ATGTATCGGGTCATAATCAGCACAGAACATACAAACACTGACTCACTCACTCACTCTAGCAGCATCTCAACTCAACTCAT TCCATGGCAGCCACCACCAGAGCAATAGCCATAACCAGCAACTCCACATGCTCTCTACTTACCAAGAAGAAGCCCTTTGT TGGCTCCCAATCTACCCTTTGCCTCAATGTTTCTAGTTCCAGGACTACCAGGTCTTTTACCTGCAGAGCCATTTACAATC CTCAGGTTTTGCTCAAGGAAGAAGGCCAACCCCAATCCCTCGATTACAGAGCTTTCTTCGTCGATCAATCTGGCAACAAG GTACTTTTCTCATCCCTCTCTTTAATTTTAATTGGGTTCAAATTTGCATATTATTATTAAACGGGCATCGAAAATTTGGG ATTTTTTTAAGATTCTGCTACTGGGTTTTGCTTAGAACTAGAACTTTGTGATGTTGGGGCATCAAAGTTTCTTTCTTTTT GTATCATTGTCACTGCAATGGAAAGAGGGTGGTGTGTGGTTGCTGTGTTTTGATTAGTAAAAAATGGCATTCAATGTGGA ATTGAAAATTGATGGTTTTTCATTTCCTGAGCATTTGCTTGCTGTTTATTGGGAGGATGGAAGTGTTAGAAATGAATAAA TCATTGGATGCTTGAGCTGATCTAGGACTGATGTCTGGTTTAATTGTAGTGTTTTCTTTGATAGATGAATACTGAATAGC TTTTTAATTTGTTGTGACTTGTGAGATAGCATTGGTATGGTGTTGGTTAATTTTGATTTTGATACACTTCAGAGTTCAGA AGCTGATAGAGATGTTTCTTGTGTGTGTGTGTGTTTTCGCTTTTTTCTTATACACTTTAACTCTCCTGTTGTGATTGGAA TCAAGGACAGGTACTGAAAAATAATCTGTAAATTATGCAGGTTTCTCCCTGGCATGATATTCCATTGCAGTTAGGTGGGG GTGTCTTCAACTTCGTTGTTGAAATACCAAAAGAATCCAGTGCAAAGATGGAGGTTGCCACTGATGAGCCTTTCACTCCC ATAAAACAGGACATTAAAAAGGGAAAGCTTCGATTTTACCCGTGAGATACAACTTCAAAGCTCACTGTTCCCTTTTCGTT GTATTTTTTGTCATTGGCCGAACACTTTTATTCCTTAACATAAATCTATTTTCCAACCAAGAGTTTATCTTTATTAAGGG AGCATTGGCAATGTAAATGTCCTGTGGTATATTTAGAGGAGCCTAATTTAATAATTGTAGCATTTTGCATGCCTCATTCA TCAGGTCTCGGGATTCTTTTTGCCTTCTTTTGATACTTTTCTTTTGTAATTTAGCTATTTGATTTAGTTGCATATTTATC CTATTCTAAAACTTATCTTTTGCTTGCTCTCCAGTTATAATATACATTGGAACTATGGCTTACTTCCACAGACATGGGAA GATCCATCTCTTGCAAACTCTGAAGTTGAAGGAGCATTTGGAGATAATGATCCAGGTATTCCATATTTCCATTACTAATG AATCTAGACCCCAATCTTTCCCATAATGTTGTCTTGTCATAAATAGGACTGCAACAAAACATGTCTAAAATTCTTGTTAA TTTGTAGTTGATGTGGTTGAGATTGGTGAAAGCCAGAGGAAAATAGGCGATGTTCTCAAGATCAAACCGCTGGGTGCATT AGCCATGATTGATGAAGGAGAACTTGATTGGAAAATAGTTGCAATTTCATTAGATGATCCAAAGGCTTCACTTGTGAATG ATGTTGATGATGTTGAGAAGCATTTTCCAGTAAGCTCTGCTTCATAACTAGCTAATTATTTATTTCTGTTCTGCCATTTA TCTGTTTACAATCACGTGGAGCAGTTTGAGTGATTTGCAAGTGTCTGATCCAAGCTACCTACTTAGTGAAGTCAGCTTTT TTACTGTTACTGCAAAATTAACTAACAAGACTGCTGAGCCGATGCTTATGGTATTGATTGAACAATTGAAATTAAGGATT TGATCTGATTAGGAGGGCAATTATGTGTTCCTGTATGCAACCTATACTGAAGTCACTTCCATTAAGATGGAAATATTCTT GCTAGATGTGAATGTGATGCTCAATTGTTGTCATGATCAGCATCTTATGTGTATTATATTATTTTTGGTTGTCTCCAGGG AACCCTCACAGCAATTAGGGACTGGTTCAGAGACTACAAGATACCTGATGGGAAACCCGCTAATAAATTTGGGCTCAGAA ACCAGGCAGCAAATAAGGTACTCTTACTGCATGAATCTCTTACAGCAAGTATCCTAAGGAATTCTTTCTTCTGTTTTGAA CTTTATGAAATAGTTTATCACTTTACATATTATTTTAATGATTTATTGCTTATTGTTTTGGTTACTAAAGTAATTGTCTT TCTGGATGTATTATGTTTCTGTTAAGAGCTGTTTTTTTCTGGTAGATGTTTGTTGCTAGATCACCATAGGGTTAGGGAGA TGGGAGTGTTTTAGGGTTACTGGTGATATAATGTATTCTTCTTGTGTGTGCTCATTTTATCTCTGTTGAATCTGTCTTAA CTCTGACCCTTACATTTGGTGAACAGGATTATGCGCTTAAGGTCATTACAGAGACCAATGAGTCCTGGAGTAGACTTATC AAGAGATCAATTCATGCTGGAGAGTTGTCACTTGTGTAAATGCATTGACAGTGTTAGTTACTCATGCCAATGCTTGCATT TTCTACAATGCTATTTATGACTTAGCAAACTCTTCTGTCGAGCTTCACGATTATATCAATGACATTATTTACCTTTTTTG GCCTGACACTCGTTCAGTATATTCATCTGCCTTAATCCTTATGTATTCTGCATTTCATTTTGTCATTCTTCATTCTAATG GGATTACTTCAGAATTCAGATGGTTCCCAAACAGGAGTGGCAATAGCCAATGAGCTAATAATTGGTACTAAAACTATAAT TTTGTAGGACTTGAACTGAAGTTTTTGATCCACTATTCTGGCAGAATAATGTTATCCGCAATGAAACTGTGGACAGTTGC TCCTGACTTTAATTTAACCTGAATTATTTTTATGTAACATCATCTCAATGCCAATGGAGAATCCGGGTGTGGTTGTATTA TTATACACATTTCTGTATGCAAGTATGTACTATAGGACACGGAACCCTACTTTATATTCCAATAAAATGCTTCTTACTTT TAGAAGTAGTTAAGTTTTGATTACAATACTAATAAGATTTCAAATTTGTGTCACGTTAATCAATTAAGTTAAATAAAAAT ATATTTTTC
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0346300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAGCCACCACCAGAGCAATAGCCATAACCAGCAACTCCACATGCTCTCTACTTACCAAGAAGAAGCCCTTTGTTGG CTCCCAATCTACCCTTTGCCTCAATGTTTCTAGTTCCAGGACTACCAGGTCTTTTACCTGCAGAGCCATTTACAATCCTC AGGTTTTGCTCAAGGAAGAAGGCCAACCCCAATCCCTCGATTACAGAGCTTTCTTCGTCGATCAATCTGGCAACAAGGTT TCTCCCTGGCATGATATTCCATTGCAGTTAGGTGGGGGTGTCTTCAACTTCGTTGTTGAAATACCAAAAGAATCCAGTGC AAAGATGGAGGTTGCCACTGATGAGCCTTTCACTCCCATAAAACAGGACATTAAAAAGGGAAAGCTTCGATTTTACCCTT ATAATATACATTGGAACTATGGCTTACTTCCACAGACATGGGAAGATCCATCTCTTGCAAACTCTGAAGTTGAAGGAGCA TTTGGAGATAATGATCCAGTTGATGTGGTTGAGATTGGTGAAAGCCAGAGGAAAATAGGCGATGTTCTCAAGATCAAACC GCTGGGTGCATTAGCCATGATTGATGAAGGAGAACTTGATTGGAAAATAGTTGCAATTTCATTAGATGATCCAAAGGCTT CACTTGTGAATGATGTTGATGATGTTGAGAAGCATTTTCCAGGAACCCTCACAGCAATTAGGGACTGGTTCAGAGACTAC AAGATACCTGATGGGAAACCCGCTAATAAATTTGGGCTCAGAAACCAGGCAGCAAATAAGGATTATGCGCTTAAGGTCAT TACAGAGACCAATGAGTCCTGGAGTAGACTTATCAAGAGATCAATTCATGCTGGAGAGTTGTCACTTGTGTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0346300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAATTRAIAITSNSTCSLLTKKKPFVGSQSTLCLNVSSSRTTRSFTCRAIYNPQVLLKEEGQPQSLDYRAFFVDQSGNKV SPWHDIPLQLGGGVFNFVVEIPKESSAKMEVATDEPFTPIKQDIKKGKLRFYPYNIHWNYGLLPQTWEDPSLANSEVEGA FGDNDPVDVVEIGESQRKIGDVLKIKPLGALAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDY KIPDGKPANKFGLRNQAANKDYALKVITETNESWSRLIKRSIHAGELSLV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10286:SF54
3 290 288 1.6E-167 –
PANTHER
PTHR10286
3 290 288 1.6E-167
IPR008162
Gene3D
G3DSA:3.90.80.10
57 290 234 9.9E-101
IPR036649
SUPERFAMILY
SSF50324
57 286 230 2.62E-86
IPR036649
CDD
cd00412
93 272 180 3.69906E-68
IPR008162
Pfam
PF00719
97 274 178 4.4E-47
IPR008162
ProSitePatterns
PS00387
163 169 7 -
IPR008162

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0004427
Molecular function Inorganic diphosphatase activity Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006796
Biological process Phosphate-containing compound metabolic process The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0346300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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