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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0347900 |
| Transcript ID | LotjaGi6g1v0347900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | AGAMOUS MADS box factor transcription factor; TAIR: AT4G37940.1 AGAMOUS-like 21; Swiss-Prot: sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27; TrEMBL-Plants: tr|A0A0R0FWL7|A0A0R0FWL7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66067490..66077549) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGGAGAGGAAAGATTGCGATTCGGAGGATCGACAATTCCACTAGCCGGCAAGTAACTTTCTCCAAGAGAAGGAATGG ATTGCTGAAGAAAGCTAAAGAATTGTCCATTCTTTGTGATGCTGAAGTTGGATTGATTGTGTTCTCCAGCACTGGGAAGC TTTATGAGTATGCTAGCACTAGGTAAGAGCAATTTCTTATAAAATCTCTCATTTTCCTTTTAAAACATGTTTGGATCGGT TTTTCATTTGTTAGAATTAATTCTAGTTTTCAACGGAATCTACTCATACAAACTTCTTCTTAGAATTAATTTTAACTTTA TCAGTTGTTTGTTGAAGAATTTTCGATCATGCTATTAATGGCTTTGACTTATAAACTCAGGGATCTGAAATCCAATTTTT TTGTGTAAATTACCTCTTAGGGAGAAGTGTTCATATTCTTATTTAAACTAAAGTGAATAATTAAATATGCATAACTTGAT ACACTGATTGTATTATTAGGTGTCAGCTGTGCTGTACTACATGTCTCTTGCATTATTAGGAATATATCTGTCACTTTAAT TTTTGTGCTTGCCTATAACTTACCCATCGTCTTGTTTAAATGCATGTACAACCTTCATGATTATAATCCTGATTTGTACC GTATTATTTCTGAAGAAAAGAGATGATCTCATAACTAGAAGAATAACTTCTAAGCTAGAGCTGATCTACTTCTTGACAGG CATTGAGGTTTCATGCATGTTTGGGAGATAGGAAAAAACTAGTGATTTCAATCTTAGCTTCTAGTAACCCATCTAGACTA GCTTGACGCAACTGCTTTTAATACTAAAATCTTTAAAGAAGATGCAGCCTGCAGAGTATAAACCAAGTACATCAATTGAT GGTCTTTCATGACAGAGTGTGCATCAAAAAATGAGACTTATGTCTTCTTGTTTATATTCTCAATAATTTTTACTTTATTT TACTATCTAAGCAATTTGATTTCACGTGACATTGTCACCACTAGTGATTGGTGGTTACATTATATTATAGTGTTTTTTAG CATATTTTCATATCATATTTTATTTTTAATCCGGGATTCCTAGTTTAATCACTTTACCTAGCACTCAAACCCTAATCCAA CTTTGTCACTGTAACAAATGTCCAACCTATAAATTAAAAATATGATTCGAACTTAAAATTTTAAAAACAAACTAATACAA TGTGTTGGGAAATTTCACACAATTGTTGTTACAATGGGGAATTGAATGTGTTCAGGATGAAATTTTAGCAAGTATATACA TCAAGTTATATAAATAATACAATGTGTTTAGACAAACATAAGAATTTGTTAGTTCAAATAGATTTTAAGTCTAGAATAAC CATGTGAGTCGGCTGAAAAATCAACGTAATAATTATCAAACCAAAAGATTACTTAAGGAAGAAATTATGCTCCTTAATGC AGACTCACATGTGTTTATGCTACTTTTTTGTTGTGGGCTTGGCTTTGTAATATCATCTCTGCCTTTGTCTATTTAGAGCG TGATATTATTCTATCCCTTTGCTTCTTTTTTGTAAATACTTTCTTGTTTCTTTTCACGTTAGAGTACCCCTAATACTCTT TTTCAATACAATTTTGCTTACCAAGAAAGAAAAAAAGATTCCTAAGGCACTCTAAAAAAGCTTTTAGTAATAGTTATATT GATTGTTTGATTGAATGGTTTGTACAAAGTGACTCTTTCTCTATTTATATGAAGTAATTTGACTAACTATCGCAATTAAT TTGAGATCATACTACTAACTCATGCTATGTTTTCCCATAAGCCATGATGGACCATGAGGTGTTAGTGTTTTATCTCTCCT AGTTAGTATGGAGATTCTTTCATACTAGACTTCCTTATATCAGCTGGTTCGATAGTAGAAATCCACATTCTCTATTATTA AGGATTTGAACCACATGATTTATCTGCACGTAAGAGAACATCCTAGAAGCTCTGAAATATCTTTCCTATAAGCTTATGTC TCTATCCACAAATTATGTATAGGTGCATTATTGCCCATGCTCGGTCTCTTGCTTTATTGTGCTAATTCATATCCTAGGTT GTTATTCCAACGACTAGTCGTTATGCTGCGACTAGCTTGCCTTTTCAGTTGCCAAAGAAGCTATTGGTTACAGATTTTTG ATTGCCAACACAATTAAGATATATACATGGAATTAAATAATCAAATGAACTTGATATTCTGATTGTAGATCAAGAAATCT TCACCTGATGTACTATAATATGGGCAGTTCTACATGTCAAAAACCAAAAAATCAGATCTTGATGAATCCCCTCCCTATTG TTTTTTCTATTTGTCACCTTTTATACCCTAGTTGTAATACCATGTAGAGAGCATATACTTAGGAATACCTCTTTACTAGG TTTTTCCAATGGGGTTTTTCTTAATAAGGTTTTAATGAGACATTTTTCCTTGTCTTCCTCCTTTGGTTTTGGGGTGGGTT CTCTCTTGATCTTTTGTAAATTTGTATCTAGTATTATTATTTGTATTGGGTTGAAGTATCTCTTTGTACTTCTTTTCAAT ATAATAAATTCTCATTGCCTATAAAAAAATATATATATACTCAGGAATACAATGACAGTTATTAACAGTGCTATTACAAT GTATAATTGAAAGATTATTACAAACTTTATCTTCAGGCTCAAAGCAGCTACTTGCTTCCAGCCGATATAAAACCTTCCAT CACCTTAACCAGACCAATCGACTTTTGTGAATATTAGGTCTTGGGTTGCATAGAGTCCTGATTAGAGGTTAAAATGCAAC TAAGTTTAGACACAGTAGCTTATGTGTCGATACTATATTGAATTTGAAACCTAGAAGTAACATACGACGTGGTTTTTTTT TATAAGCCAAGCAATTGTATTCAAATAGCACAAGGGGTGCTAACCCAAATACAAGAAGAAGAGAAAATAACAAGATATTG TTGTAACAGATATCACCAAAATATAAAAGATAAATAAATAACAGATCAAAACAAACAATCTGTTATATAACCCTTCTTAT AAAGATTAAATAGTTCCCCTACCCACAAGCTAAGCTCCAGATGTGTCGAAAGTCTTCCTGACACCGTAAAGATCTGCCAG CATATGTCCTAATGTTATGACAAAGCCTATTATGGTACAAGTACATGAACAAAATGCTTCATCTTAAAATGCTCTAACAC TTGATGGAGAGATTGTTGGGGTTCCAATTGTGATCAAGAAGACTCACATCGGATGATAATGGCTATGTTGAGAAACATAA GTGGGATGACTTATACGACTAATGGCATAAGATTTTGGGTAAGTGGTGTCTGGTTCTCTTGGTGACCTTTAGTCTTAGCT CATTTGTGCAGGTTCTCCTGGTTTAGGCTCTCATATCTTCCCAACAAGTAGTATCGAATTTAATGGTTGGTGCGACCAAG GTGTGATGGCTCATGTATCAAGTCATCTTGGCAATGTGGTGGCTAGCTAGGCATTGTGTTCCTTTCAGAGTGAAAGAAGA TGCAAGTGTTGATAACTTATATGAGAGGGGGTATAATAATATGGAGATGACTCACACTTGAGGGGGAGATTGTTGGTCAT TCAAGTGTGTTGTCTTGAGTCGCACATCGGTTAGAAATGGATGAGATGAAGACAATAAAAGAGATCTGATCCATACAATT AATGTCTTAATGTTTTGTGTGAAAGATGGAGTTCAATCCTTTAATGTTGTTTCTCTTAGCCCACTATGGAGATCACCTAG AGTTTTAGGCATCTCGCAGCCCAACACTGGTATCATAGTCAATGGTTAGTGACCACTAGCCTCTTGTGTCGAAAGTCTTC CTAGAGATCTAATGGGCAGTTAGCGTGTCTAGATGATATAGAAAGCTAGCAGCGATTGAAGTACGTGGATGAAAGACTTC CTCTTGAATTGACTCACACTAGGGGGGAATATTTTTAGGATACCAAGTGTGAGTAAGAAGCCTCGCATGGATGATATGTG TATGTTGAACAACATATATTTAAGTGATATGACTCATACACCTAAAATGAGTTAAGGATTTGGATAAAGATGTGGTGTAT GCTTCTCTTGGTGGTTTTCAATATTGACCCATTTGTGTAGGTTCTTCTGCTTTAGGCTCTTCATATCTCTCCAACAAATG ATATTAGAGACGATAGTTTGTGCAATCATAGTTTAACGATTCATTGCTTCAAAAGACTTTTTGGTAATCCAGTGGCCAAA CAACATATTTGTTTAAGGGTGAACGGGGGTTCAAATGTAGATAGCTTTCAATGAGGGGATTATAGTAATGTGAAGGTGAC TCACATTTAAAGGGGAGATTGCTGATAATTCAAGTGTAATATTTGAAGTCACAAATTGGTTAAGAAGGATAAGGTACATA ATTACATGTATAAGAAATATAACTCATAAGCTCAACGTTTTAAGATTTTAGGTAAAAGATGTGGTATTCATAACATTTTT ATGTTGCTGGCTCTTAACCCAGCGTGAAGATGTCTCTAGAATGTTAGGTATCTCACATCCCAACATATGGTTGGGGTCTG CAGTGTTATAGTTCTTCTCACTTTAACTCTGTAAAATAGTCGATAATAGACATTGTACCTTGTTTATAGCCATATATCAC TTGCTGCAATTCCGAGACCCTGACAAATCTCCTTGAGAAACTCTTTCTTTTACATCCTTCCTTACTTCTACACTCTGAAC GTAAATCACACTCTGAGCAAGCCACTTAACACATATCCAATAATGCAAAAGATTTTTGTACCTTTCCAAGCATCAAAGCT TGCACCAAAAGATTTGAGATTCTTCCATCATCGCTTTTTTCATAGTGCGAGCTAGTTAATGATAGTTCTCGCCCGTAAGA ACTAGATTTATAAGTGTTGCTGATGTATTTATGTTGGAGAACATTATAGGGACTAGCTGTATTTTGGTTTTGTTCAAGAA GCACATTAGCATGCATCACATCATCTCCTAAACTCTGGTGGCCGAGCCCCTGTTTGTAAGGGCTCTGATACTATCTTATG AAGAAGAGAAAATAAACAAGGCTTATTAGAATGCTTGATTACTAGTATCAATAAGTTACGTATGGTTTGAGGGGTTGTCT AAATGACCCATGATAAAGTTTGGGTTAAATAAACCACCATCCAATCATATTGAAGATAAATGAGTTGGAAATAAATTAAT AAATATAAAATAGAAATTCCAACTCACTTATCTCCAATGTGATTGAATGGTGGGTTATTTAACCCAAACTTTATCATGGG TCATTTAAACAATCCCATGGTTTGATATGATACAGCTAACACAAGCCAATTTGCTATGTCAAACAGAAACTAACTTACAA AATAACTCAGTAACTTTTTTGGCCATGTAATTAACAACTAACTTCATTAGTTCACTATAACTATCTCTTCATTGTTCAAG TTCTTAAAAAGAATTCCTTAATTTAGGTAATAACTTGATTGGTAAGTGTCAGATGGTTTACTCGATGAACATCTTTGCAA AAATATTTCGATTGAATTAAAGTGGTTTTTTTAACTCATTCAAAGATTAAAGCGTGCCATTTTCATCTTCCAAGGATTTC GGCATTAAAATTATCTTTTTACGTGACGATCAAGATCAGTCTCTACTAATTTTTGTCTGACTTTTTTTAATTTAAATACT ACATAGATCTGAAAATTCTTTGAATAAGACGAAATATAATTTTAATGAACATGGTAATATTATCTCGGCATGTTCAACGC ATTAATAAATATCTTTTACTGGTATCAGTTTAAACTCAACGCATTAGCATACATCTCTTTTTATTCATTAAAAGTTGCCA ATACAATATCACACTGACTCCTACATTATGGCAGCATGAAATCTGTTATTGAGCGCTATAACAAGCTAAAAGAGGAGCAT AATCAGCTAATGAATCCAGCTTCGGAACTCAAGGTAACTCTGCTTTTATAATATATTTACTGTTAAACTTCATGGTTTCA GGCATTACATTATTACATTACTCAATTTGCATATATTATGCAGTTCAAATTATTTCTAATAATACCTGAACAACAACTTG AATTTGGCGACAAAAGTAGAAAGCCAAATAATAAATGTTTATTGCAGGAAACTACACATCGCAGAGCAGTCCAATGCCAA CACGTGTTCCAATGGTGTCTGTAGTTGTCGTGACTCTTTAGATAACTGCACTTTGCACCTAGTTACAGATGCACATACAT GTCAATCTGCTTAGATTGTCTCTGCTGTGTGAAAGTGTCATCATATATTTCACCCTTTAGTCGTTTGCCGAGTCTCATTC AATAAAATATAGAATTGAGGTACCAATGTGCAAGAGCTTGCATGTAAGTGAAGATCCAAATAGAAGATTAATAGCCTGAT GTATGCTTCACTGTCTCACTAACAGACCAAATAATTAAAACTTGTTGTAGGCTTCATCAACTTATTTCTGATTCTACATC AGTCTTGTACAAACTACATTCCATATATTCTGCTTTGCTTTTATTTAGTCAGAAGCCATATGTTTGTAAGGTTTGTCTGC ATATCGCTAACCTTGCATTTATATCTTCTCTCAATTCTCTAACCTCTACATACAGTTCACAAAAAGCATGCACAGTTGCA TTGTTGCTTAGATTTGTTCAATAAGCATGTCTAGAACTACAATAAAATGATAATGACTCAGTAGAAAGCAGCTCTATTTT CTCTTCTACATCTAGCTTGTTGGCTAAAATTGTGTCTTGACTTCAGATGAGAGAGAACCAAGAGAAAGGGGTACACTAAA GAGATCCCTTCCATTGATTTAAAATCATTCCACAAGATGAGAGAACAAACAAAAAACAATATTCTTGAAATTACCTTATA TATAAACAACGAAAGGTAGATTCCAATATTACTTCTAACTAGATTCCGGTATACTTTATCTCATTTACCCTTATTATTTC TAAAAGCCATATCATTTTGACTTAACTCAAGGAAGTTGGGATGGGTGGTGTGGATTTGGAAAAGATTGTAGATGCTAAAG TGATGGTAACACCTTCATGTGCCAAAAAAGCCACAACAAAAAAAAGGATCACATCACCTACCCTCTATGCTTCAAAAACA CTAGTTGCTCCTAAGGAAGAGCCATTTGTCTAGTTTGATCTCTCTTCTTATTAGATACACATCATGTAAAATAAGCATTA TGCATAGCCAATTCCCTTATATCCCCAAAATAAAGGATACTAGGGTATTCAAGCAAAACTCTTCCAGATTTCTATTCTTC CTAACAGGAATAACAACCAGAAATTATCTATGATACCAAAATTATCATAACCGTGTTATAATTTGTTAGATAGAAGGGCA TTTGCTTCAAGTAGTTAGAGGGGAAGAATAACAAAATAGATGTTAGTTTTGACAGTTACAGAAGTTAGAGTGGATTTGTG ACATAAGAAAATAGGGGGATGCAAAGGTTGGCGGATCATTCTGGATTGTTAACATTTCAGAACTGAGAATTTGCTCTGCT GCAGCCAGGGTAAATTTAGAGGAGAACTCCTTCGTTCTCTAGTTATATCCAATCACCAATAAAAGGTGATCACTCTTTTC TCTCTTTTCAGTTTTTTGAGCTATATGCTCTGTTATACCATATTCTCTTTCTGGGTAAATTGGATGAAGGAAGGGGCATA TTGGAATTTCTTCCAACCAAGCTCATATTGTTACATAACGGGCCAAATCCAAGACTATCGAATTCAGCCTAAAGAGGGGA TATTCTACTATATAAAGAATTTTAAAAATATGGTTAGGACACCAAAATAACTTACGTGCAGTAAAATAATAAGGCAAATC ACCATACTAGCAATATTTATAGTCTAAAAAGCATCCTGATTCCTGATGTTGGCTCTTGTCCATTATGTTAGTCCTCAAAT TCTCTACCCTACAATCTTGTATTAAAATAAGTTCCTCCGATAATAACGGTGAAATATATCTGATATCTGTATTTCTACTT GCTAGTTTTGGCAGACAGAAGCAGCAAGCTTGAGACAACAACTACAATACTTGCAAGAATGTCACAGGTAATATAATAAA TGCATGAAAGCCCAGCAGTTGCATAATTGTACTAAAAGCAAGAATATAGAATGAAGCAGGTTACTATCATCACTTTTTGG TGAGAGTAAAATTATAGGGAGGGCATAAAATCGGAAAAGGAAAAGAATTTTACCAGGCACCTTTCTAATCTCTACCAAAA TATCAACAAAAAGGAAAGTCATATCCATCTTTGCTTCTCCTCCCTCCCAAGCATTTCCATAGCATGAAATTAATATATAT TGAGTGTCTCATTAGTGAGGTAAAGACATTGGAGGCATCCCACATATGAAATGGAAGAGATAGACTCAAAAGACAAGACA TAAGGAGCAAAGTTTGACAATATTTCATAAATAACTTGTTAAGTCTAACCTTCCACTGTGTTATTTGGCTTTGATATGAA AAACGAATAGCTTTCAATATTAGGCTTTAAGGAAAGGTGAATTCAAAAAAATAGCTTTGAAATCACTGCAGAGCTGAACT CTAGTAAATCATATAATTTTGGTCCAATGATTCACTCAGAACTCTACAGCAATTTATTATAAGTAGAACATGTGATCTGA AAACACTGACAGTGAAAAAAAATGTTGTAAATAGGACAACTAGAGCTTCTTGACACACAACTAGCCATACTATAAAAAAT TAAGCTTAGAAACTTACAATATTTTTCTGCTAGAAATAAACCCATCTAAGATGAAAAATTATCTCATACTTTCTGTTAGA ATAATATAAAACCATTAAAATGATCCTTACCCACCAGCTTAAGCTTTTGGGATAAAGTGGTTGTTTGACATGGTATCAGA GCCTCTATGACCGAGAGGTCTAGAGTTCGATCCTTGCTCCCCTCACTTTCTGATTAAAAAGTGGAATTTAATTAAGCACA TGGTAGGTGGGCCTGTGCATTTATCCATGCTTCAAGCCCAAAGGGCTCTTGCGTGAGGAGGCGTGTTAGAATATAATATA AAACCATTAAAGTGACCCTTAGTCCCTTACCCACCAGCTTAAGTTTTTGGGATAAAGTGGTTGTTTGACACTTTCTTCAT GGTAAAAGTAGGCAATTAATGGGTGAAGGACTTTCTGGTTTGGGTGTTAAAGAACTACAAAATCTGGAAAACCAACTGGA GATGAGTTTAAAGGGTGTTCGCATGAAAAAGGTATGATGGTCACATCAAATCAAATTTCTTTGACTCATGTTTCAAGATT CCATCTTTTTGACAACACCTTTATTACTCTTACAGCATAATCTATTTCCCTGCAGGACCAAATTTTGACTGATGAGATTA AGGAGTTACACCAAAAGGTTTCAGGAGACTGGTTTTATTCTTGCTATGTTTGACTGAGGTTTTCCCACAAACTTTTGACC AATTTCCATTAATGCAATTGTAGGGAAATCTCATTCATCAAGAAAATGCGGAACTCTATAAAAAGATGGAGCTTATCCAA AAAGAAAACGCAGAGCTACAAAAGAAGGTAGGCGGTTGTGAAAAAACATTCTACAATTTAGGAATCAGATATTCACCTAT AACTCATGTGCAGGAAGGACTGCACTTGATGAGTACAATTTAGGAATCAGATATTCATCTCTAAAAAAGTTAGGCATGTA TGATTAACAAGTCTGTGCACACAGACAAAGCACATATTTAGTCCTAATGCAATTTATCTAGAAGCTAAATACTTCAAGTT TACTTCAACTAAAACTAAACAGAAGATATGGATCTTAGGTTTATGAAGCAAGGAGTACCAATGAAAAAGATGCAGCATCC AGTCCTTCCTGCACTATCAGAAATGGATATGATTTACAGGCTATCAGTCTCCAGCTAAGCCAGCCACAGCCTCAATTCAG TGAACCACCAGCCAAAGCAGTGAAACTGGGGTATTCCCTCAAACTAATATTGTAAAACATGCAGATTGATACTATAATTT TTTGTTATAATTATCAGAAACTAAACCCCTGCATTCTGCACCAGATTACAGCTGCAATAG
CDS sequence (LotjaGi6g1v0347900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGAGGAAAGATTGCGATTCGGAGGATCGACAATTCCACTAGCCGGCAAGTAACTTTCTCCAAGAGAAGGAATGG ATTGCTGAAGAAAGCTAAAGAATTGTCCATTCTTTGTGATGCTGAAGTTGGATTGATTGTGTTCTCCAGCACTGGGAAGC TTTATGAGTATGCTAGCACTAGCATGAAATCTGTTATTGAGCGCTATAACAAGCTAAAAGAGGAGCATAATCAGCTAATG AATCCAGCTTCGGAACTCAAGTTTTGGCAGACAGAAGCAGCAAGCTTGAGACAACAACTACAATACTTGCAAGAATGTCA CAGGCAATTAATGGGTGAAGGACTTTCTGGTTTGGGTGTTAAAGAACTACAAAATCTGGAAAACCAACTGGAGATGAGTT TAAAGGGTGTTCGCATGAAAAAGGACCAAATTTTGACTGATGAGATTAAGGAGTTACACCAAAAGGGAAATCTCATTCAT CAAGAAAATGCGGAACTCTATAAAAAGATGGAGCTTATCCAAAAAGAAAACGCAGAGCTACAAAAGAAGGTTTATGAAGC AAGGAGTACCAATGAAAAAGATGCAGCATCCAGTCCTTCCTGCACTATCAGAAATGGATATGATTTACAGGCTATCAGTC TCCAGCTAAGCCAGCCACAGCCTCAATTCAGTGAACCACCAGCCAAAGCAGTGAAACTGGGATTACAGCTGCAATAG
Protein sequence (LotjaGi6g1v0347900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYASTSMKSVIERYNKLKEEHNQLM NPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGVKELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIH QENAELYKKMELIQKENAELQKKVYEARSTNEKDAASSPSCTIRNGYDLQAISLQLSQPQPQFSEPPAKAVKLGLQLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 60 | 60 | 1.6E-41 | ||
| ProSiteProfiles | 1 | 61 | 61 | 32.59 | ||
| CDD | 2 | 76 | 75 | 3.50012E-47 | ||
| PANTHER | 2 | 211 | 210 | 3.4E-101 | – | |
| SUPERFAMILY | 2 | 88 | 87 | 1.03E-33 | ||
| PANTHER | 2 | 211 | 210 | 3.4E-101 | – | |
| PRINTS | 3 | 23 | 21 | 7.9E-30 | ||
| ProSitePatterns | 3 | 57 | 55 | - | ||
| Pfam | 10 | 57 | 48 | 7.2E-26 | ||
| Gene3D | 13 | 91 | 79 | 2.4E-31 | ||
| PRINTS | 23 | 38 | 16 | 7.9E-30 | ||
| PRINTS | 38 | 59 | 22 | 7.9E-30 | ||
| Pfam | 84 | 170 | 87 | 1.0E-26 | ||
| ProSiteProfiles | 86 | 176 | 91 | 15.75 | ||
| Coils | 163 | 190 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA polymerase II regulatory region sequence-specific DNA binding | Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi6g1v0347900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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