Lotus BLAST

Basic Local Alignment Search Tool

Search various Lotus japonicus gene and protein databases using BLAST. This tool is powered by SequenceServer v1.0.9, an open-source project to provide a user-friendly graphical interface for NCBI BLAST+ packages. We are currently running v2.2.31 of the executables.

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Lotus Base
BLAST

Lotus Base contains alternative versions of BLAST for different user groups. To access the BLAST service that is specifically available to your user group, please login.

You are logged in as a user belonging to a group with access to an expanded BLAST tool. Please visit https://lotus.au.dk/blast-carb/.

Sequence query ?

Detected: nucleotide sequence(s).

Detected: protein sequence(s).

Detected: mixed nucleotide and protein sequences—BLAST is unable to handle mixed sequence types. Please try one sequence at a time.

Drop query sequence file here

Overwrite query sequence file

Release your file here to begin your search. Press Esc to close this dialog.

Please upload one file at a time.

No file drop detected.

File size is too big. Please use file sizes less than 10MB.

Only FASTA files are accepted.

Database selection ?

Nucleotide
Protein

You have selected databases from a different group. To select databases from this group, please uncheck databases in the other tab.

Lotus japonicus Gifu

Lotus japonicus Gifu genome v1.2
Lotus japonicus Gifu v1.2 CDS
Lotus japonicus Gifu v1.3 CDS

Lotus japonicus MG20

Lotus japonicus MG20 genome (Li et al., 2020)
Lotus japonicus MG20 genome (Li et al., 2020) CDS
Lotus japonicus MG20 genome (Li et al., 2020) transcripts
Lotus japonicus MG20 genome v2.5 + LjSGA
Lotus japonicus MG20 genome v3.0
Lotus japonicus MG20 v3.0 CDS
Lotus japonicus MG20 v3.0 cDNA

You have selected databases from a different group. To select databases from this group, please uncheck databases in the other tab.

Lotus japonicus Gifu

Lotus japonicus Gifu v1.2 Proteins
Lotus japonicus Gifu v1.3 Proteins

Lotus japonicus MG20

Lotus japonicus MG20 genome (Li et al., 2020) proteins
Lotus japonicus MG20 v3.0 Proteins

Advanced parameters ?