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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0163319 |
| Transcript ID | Lj0g3v0163319.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transporter ERD6-like 7-like [Cicer arietinum] gi|502109384|ref|XP_004493632.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 38 | 38 | – | – | |
| PANTHER | 2 | 490 | 489 | 0 | – | |
| PANTHER | 2 | 490 | 489 | 0 | – | |
| TIGRFAM | 32 | 484 | 453 | 2.20E-83 | ||
| TMHMM | 38 | 60 | 23 | – | – | |
| Phobius | 39 | 61 | 23 | – | – | |
| SUPERFAMILY | 44 | 242 | 199 | 1.10E-51 | ||
| ProSiteProfiles | 44 | 478 | 435 | 40.345 | ||
| CDD | 55 | 474 | 420 | 2.57E-19 | ||
| Gene3D | 57 | 237 | 181 | 2.20E-17 | – | |
| Pfam | 60 | 487 | 428 | 2.10E-84 | ||
| Phobius | 62 | 80 | 19 | – | – | |
| TMHMM | 80 | 102 | 23 | – | – | |
| Phobius | 81 | 102 | 22 | – | – | |
| ProSitePatterns | 98 | 115 | 18 | – | ||
| Phobius | 103 | 108 | 6 | – | – | |
| Phobius | 109 | 128 | 20 | – | – | |
| TMHMM | 109 | 126 | 18 | – | – | |
| Phobius | 129 | 139 | 11 | – | – | |
| PRINTS | 135 | 154 | 20 | 6.30E-16 | ||
| TMHMM | 136 | 155 | 20 | – | – | |
| Phobius | 140 | 159 | 20 | – | – | |
| Phobius | 160 | 170 | 11 | – | – | |
| Phobius | 171 | 194 | 24 | – | – | |
| TMHMM | 176 | 198 | 23 | – | – | |
| Phobius | 195 | 213 | 19 | – | – | |
| TMHMM | 213 | 235 | 23 | – | – | |
| Phobius | 214 | 234 | 21 | – | – | |
| Phobius | 235 | 291 | 57 | – | – | |
| SUPERFAMILY | 271 | 485 | 215 | 1.10E-51 | ||
| TMHMM | 288 | 310 | 23 | – | – | |
| Phobius | 292 | 314 | 23 | – | – | |
| Gene3D | 293 | 484 | 192 | 4.50E-14 | – | |
| PRINTS | 302 | 312 | 11 | 6.30E-16 | ||
| Phobius | 315 | 319 | 5 | – | – | |
| Phobius | 320 | 347 | 28 | – | – | |
| TMHMM | 325 | 347 | 23 | – | – | |
| ProSitePatterns | 343 | 360 | 18 | – | ||
| Phobius | 348 | 353 | 6 | – | – | |
| Phobius | 354 | 376 | 23 | – | – | |
| TMHMM | 354 | 376 | 23 | – | – | |
| Phobius | 377 | 387 | 11 | – | – | |
| Phobius | 388 | 413 | 26 | – | – | |
| PRINTS | 391 | 412 | 22 | 6.30E-16 | ||
| TMHMM | 391 | 413 | 23 | – | – | |
| PRINTS | 414 | 426 | 13 | 6.30E-16 | ||
| Phobius | 414 | 424 | 11 | – | – | |
| Phobius | 425 | 444 | 20 | – | – | |
| TMHMM | 425 | 447 | 23 | – | – | |
| Phobius | 445 | 455 | 11 | – | – | |
| TMHMM | 452 | 474 | 23 | – | – | |
| Phobius | 456 | 474 | 19 | – | – | |
| Phobius | 475 | 491 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0163319.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0163319.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.