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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0217409 |
| Transcript ID | Lj0g3v0217409.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max] gi|356560149|ref|XP_003548358.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 95 | 93 | 9.60E-07 | ||
| SMART | 4 | 86 | 83 | 64 | ||
| PANTHER | 15 | 976 | 962 | 3.00E-266 | – | |
| PANTHER | 15 | 976 | 962 | 3.00E-266 | – | |
| SUPERFAMILY | 59 | 183 | 125 | 1.23E-18 | ||
| SMART | 97 | 174 | 78 | 5.70E-04 | ||
| Gene3D | 98 | 184 | 87 | 3.90E-16 | ||
| ProSiteProfiles | 100 | 184 | 85 | 15.482 | ||
| CDD | 102 | 170 | 69 | 1.05E-05 | ||
| Pfam | 106 | 170 | 65 | 6.00E-06 | ||
| ProSiteProfiles | 182 | 271 | 90 | 19.849 | ||
| SMART | 184 | 261 | 78 | 2.50E-15 | ||
| Gene3D | 186 | 273 | 88 | 5.30E-24 | ||
| SUPERFAMILY | 186 | 272 | 87 | 9.16E-24 | ||
| CDD | 189 | 258 | 70 | 1.37E-11 | ||
| Pfam | 190 | 253 | 64 | 1.70E-22 | ||
| ProSiteProfiles | 370 | 462 | 93 | 14.675 | ||
| SUPERFAMILY | 370 | 453 | 84 | 1.27E-14 | ||
| Pfam | 372 | 448 | 77 | 8.70E-07 | ||
| SMART | 372 | 452 | 81 | 8.40E-08 | ||
| Gene3D | 374 | 456 | 83 | 3.30E-14 | ||
| CDD | 377 | 448 | 72 | 3.87E-06 | ||
| ProSiteProfiles | 566 | 654 | 89 | 14.313 | ||
| Gene3D | 568 | 656 | 89 | 3.30E-13 | ||
| Pfam | 568 | 651 | 84 | 1.70E-07 | ||
| SMART | 568 | 644 | 77 | 0.96 | ||
| SUPERFAMILY | 569 | 656 | 88 | 4.06E-13 | ||
| CDD | 573 | 642 | 70 | 8.07E-05 | ||
| SUPERFAMILY | 632 | 751 | 120 | 7.72E-26 | ||
| SMART | 664 | 740 | 77 | 1.40E-10 | ||
| ProSiteProfiles | 667 | 750 | 84 | 15.983 | ||
| Gene3D | 667 | 758 | 92 | 8.40E-25 | ||
| CDD | 670 | 738 | 69 | 4.19E-07 | ||
| Pfam | 671 | 732 | 62 | 4.50E-21 | ||
| MobiDBLite | 894 | 947 | 54 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0217409.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0217409.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.