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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0306909 |
| Transcript ID | Lj0g3v0306909.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: vacuolar cation/proton exchanger 2-like [Glycine max] gi|356556151|ref|XP_003546390.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 297 | 297 | 1.30E-233 | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 1 | 297 | 297 | 1.30E-233 | – | |
| TIGRFAM | 1 | 287 | 287 | 7.20E-80 | ||
| Pfam | 2 | 111 | 110 | 9.30E-10 | ||
| TMHMM | 20 | 42 | 23 | – | – | |
| Phobius | 20 | 44 | 25 | – | – | |
| Phobius | 45 | 55 | 11 | – | – | |
| TMHMM | 55 | 77 | 23 | – | – | |
| Phobius | 56 | 78 | 23 | – | – | |
| Phobius | 79 | 89 | 11 | – | – | |
| TMHMM | 89 | 111 | 23 | – | – | |
| Phobius | 90 | 109 | 20 | – | – | |
| Phobius | 110 | 143 | 34 | – | – | |
| TMHMM | 144 | 163 | 20 | – | – | |
| Phobius | 144 | 163 | 20 | – | – | |
| Pfam | 145 | 284 | 140 | 2.90E-21 | ||
| Phobius | 164 | 174 | 11 | – | – | |
| Phobius | 175 | 202 | 28 | – | – | |
| TMHMM | 176 | 198 | 23 | – | – | |
| Phobius | 203 | 207 | 5 | – | – | |
| Phobius | 208 | 233 | 26 | – | – | |
| TMHMM | 208 | 230 | 23 | – | – | |
| Phobius | 234 | 244 | 11 | – | – | |
| TMHMM | 243 | 262 | 20 | – | – | |
| Phobius | 245 | 263 | 19 | – | – | |
| Phobius | 264 | 268 | 5 | – | – | |
| Phobius | 269 | 290 | 22 | – | – | |
| TMHMM | 272 | 290 | 19 | – | – | |
| Phobius | 291 | 297 | 7 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Calcium ion transport | The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Calcium:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + H+(out) = Ca2+(out) + H+(in). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0306909.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0306909.1, powered by CORGI.
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