Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | Lj1g3v1386650 |
| Transcript ID | Lj1g3v1386650.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Respiratory burst oxidase-like protein [Medicago truncatula] gi|357464889|ref|XP_003602726.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 180 | 180 | – | – | |
| Gene3D | 8 | 130 | 123 | 3.00E-11 | ||
| Pfam | 13 | 60 | 48 | 7.60E-15 | ||
| PANTHER | 14 | 570 | 557 | 0 | – | |
| PANTHER | 14 | 570 | 557 | 0 | – | |
| SUPERFAMILY | 14 | 134 | 121 | 5.69E-15 | ||
| SFLD | 16 | 743 | 728 | 0 | – | |
| ProSiteProfiles | 57 | 92 | 36 | 11.222 | ||
| ProSitePatterns | 70 | 82 | 13 | – | ||
| ProSiteProfiles | 101 | 136 | 36 | 8.404 | ||
| SFLD | 163 | 569 | 407 | 0 | – | |
| TMHMM | 177 | 199 | 23 | – | – | |
| Phobius | 181 | 199 | 19 | – | – | |
| Phobius | 200 | 318 | 119 | – | – | |
| Pfam | 219 | 375 | 157 | 8.40E-22 | ||
| TMHMM | 259 | 281 | 23 | – | – | |
| PRINTS | 265 | 283 | 19 | 2.60E-19 | ||
| TMHMM | 319 | 341 | 23 | – | – | |
| Phobius | 319 | 340 | 22 | – | – | |
| Phobius | 341 | 359 | 19 | – | – | |
| TMHMM | 354 | 376 | 23 | – | – | |
| PRINTS | 357 | 377 | 21 | 2.60E-19 | ||
| Phobius | 360 | 379 | 20 | – | – | |
| Phobius | 380 | 390 | 11 | – | – | |
| Phobius | 391 | 408 | 18 | – | – | |
| TMHMM | 391 | 408 | 18 | – | – | |
| Phobius | 409 | 743 | 335 | – | – | |
| ProSiteProfiles | 414 | 538 | 125 | 13.758 | ||
| Pfam | 418 | 535 | 118 | 6.60E-33 | ||
| Gene3D | 418 | 493 | 76 | 2.30E-12 | – | |
| SUPERFAMILY | 418 | 498 | 81 | 1.48E-16 | ||
| CDD | 421 | 743 | 323 | 2.80E-45 | – | |
| PRINTS | 524 | 537 | 14 | 2.60E-19 | ||
| SUPERFAMILY | 525 | 535 | 11 | 1.48E-16 | ||
| SUPERFAMILY | 539 | 567 | 29 | 2.45E-11 | – | |
| Gene3D | 542 | 567 | 26 | 1.30E-12 | – | |
| Pfam | 542 | 725 | 184 | 2.40E-51 | ||
| TMHMM | 544 | 561 | 18 | – | – | |
| PRINTS | 547 | 564 | 18 | 2.60E-19 | ||
| MobiDBLite | 580 | 601 | 22 | – | – | |
| PANTHER | 600 | 743 | 144 | 0 | – | |
| PANTHER | 600 | 743 | 144 | 0 | – | |
| Gene3D | 604 | 731 | 128 | 1.30E-12 | – | |
| SUPERFAMILY | 604 | 743 | 140 | 2.45E-11 | – | |
| SFLD | 606 | 743 | 138 | 8.00E-12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v1386650.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…
A list of the top 25 highly co-expressed genes of Lj1g3v1386650.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.