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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3256690 |
| Transcript ID | Lj1g3v3256690.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MATE efflux family protein 8-like [Glycine max] gi|356573950|ref|XP_003555117.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 58 | 58 | – | – | |
| MobiDBLite | 1 | 21 | 21 | – | – | |
| PANTHER | 12 | 190 | 179 | 4.50E-99 | – | |
| PANTHER | 12 | 190 | 179 | 4.50E-99 | – | |
| TMHMM | 44 | 66 | 23 | – | – | |
| Pfam | 50 | 188 | 139 | 2.10E-26 | ||
| Phobius | 59 | 84 | 26 | – | – | |
| TMHMM | 81 | 103 | 23 | – | – | |
| Phobius | 85 | 89 | 5 | – | – | |
| Phobius | 90 | 107 | 18 | – | – | |
| Phobius | 108 | 118 | 11 | – | – | |
| Phobius | 119 | 143 | 25 | – | – | |
| TMHMM | 122 | 144 | 23 | – | – | |
| Phobius | 144 | 213 | 70 | – | – | |
| TMHMM | 159 | 178 | 20 | – | – | |
| Phobius | 214 | 235 | 22 | – | – | |
| Phobius | 236 | 254 | 19 | – | – | |
| Phobius | 255 | 279 | 25 | – | – | |
| TMHMM | 257 | 279 | 23 | – | – | |
| Phobius | 280 | 280 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3256690.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3256690.1, powered by CORGI.
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