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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR11206
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 196 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 0.049s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0009279.1
n.a. PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine max] gi|356506460|ref|XP_003522000.1| chr0 3825322 3826728 +
1 domain prediction
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Lj0g3v0065909.1
n.a. Protein TRANSPARENT TESTA [Medicago truncatula] gi|357517321|ref|XP_003628949.1| chr0 23054189 23056023 +
1 domain prediction
 –
Lj0g3v0065919.1
n.a. PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356566004|ref|XP_003551225.1| chr0 23056501 23057900 +
1 domain prediction
 –
Lj0g3v0075999.1
n.a. Multidrug and toxin extrusion protein [Medicago truncatula] gi|357481725|ref|XP_003611148.1| chr0 28925411 28927351 -
1 domain prediction
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Lj0g3v0083969.1
n.a. Protein TRANSPARENT TESTA [Medicago truncatula] gi|357485623|ref|XP_003613099.1| chr0 33407159 33409907 -
1 domain prediction
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Lj0g3v0084759.1
n.a. Protein TRANSPARENT TESTA [Medicago truncatula] gi|357517321|ref|XP_003628949.1| chr0 33811791 33812137 +
1 domain prediction
 –
Lj0g3v0084769.1
n.a. Protein TRANSPARENT TESTA [Medicago truncatula] gi|357517321|ref|XP_003628949.1| chr0 33812239 33812904 +
1 domain prediction
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Lj0g3v0106319.1
n.a. PREDICTED: LOW QUALITY PROTEIN: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356544808|ref|XP_003540839.1| chr0 45704164 45707888 +
1 domain prediction
 –
Lj0g3v0107129.1
n.a. PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356530836|ref|XP_003533985.1| chr0 46165460 46165871 +
1 domain prediction
 –
Lj0g3v0108479.1
n.a. PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356497726|ref|XP_003517710.1| chr0 46893742 46894394 -
1 domain prediction
 –
Lj0g3v0111259.1
n.a. PREDICTED: MATE efflux family protein ALF5-like [Cicer arietinum] gi|502088103|ref|XP_004488731.1| chr0 48319137 48324085 -
1 domain prediction
 –
Lj0g3v0115609.1
n.a. PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356531168|ref|XP_003534150.1| chr0 50821503 50823928 +
1 domain prediction
 –
Lj0g3v0119529.1
n.a. PREDICTED: multidrug and toxin extrusion protein 2-like [Glycine max] gi|356529294|ref|XP_003533230.1| chr0 52922390 52924637 -
1 domain prediction
 –
Lj0g3v0125939.1
n.a. PREDICTED: protein TRANSPARENT TESTA 12-like isoform 1 [Glycine max] gi|356564231|ref|XP_003550359.1| chr0 56642070 56645459 +
1 domain prediction
 –
Lj0g3v0129189.1
n.a. Protein TRANSPARENT TESTA [Medicago truncatula] gi|357508985|ref|XP_003624781.1| chr0 58451439 58455342 -
1 domain prediction
 –
Lj0g3v0202929.1
n.a. PREDICTED: LOW QUALITY PROTEIN: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356544808|ref|XP_003540839.1| chr0 100502342 100506211 -
1 domain prediction
 –
Lj0g3v0206369.1
n.a. PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356531168|ref|XP_003534150.1| chr0 102834796 102838701 +
1 domain prediction
 –
Lj0g3v0206369.2
n.a. PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356531168|ref|XP_003534150.1| chr0 102836114 102838505 +
1 domain prediction
 –
Lj0g3v0218349.1
n.a. PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356527876|ref|XP_003532532.1| chr0 111279891 111282607 +
1 domain prediction
 –
Lj0g3v0229479.1
n.a. PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356531168|ref|XP_003534150.1| chr0 118802902 118803502 -
1 domain prediction
 –
Lj0g3v0235039.1
n.a. PREDICTED: MATE efflux family protein 5-like [Cicer arietinum] gi|502085081|ref|XP_004487832.1| chr0 121797553 121800784 -
1 domain prediction
 –
Lj0g3v0251019.1
n.a. PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356531168|ref|XP_003534150.1| chr0 130150473 130152984 -
1 domain prediction
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Lj0g3v0252399.1
n.a. PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine max] gi|356506460|ref|XP_003522000.1| chr0 130866070 130867476 -
1 domain prediction
 –
Lj0g3v0254649.1
n.a. Protein TRANSPARENT TESTA [Medicago truncatula] gi|357508983|ref|XP_003624780.1| chr0 132217217 132221731 -
1 domain prediction
 –
Lj0g3v0264179.1
n.a. Transparent testa [Medicago truncatula] gi|357438341|ref|XP_003589446.1| chr0 136956681 136957037 +
1 domain prediction
 –
Lj0g3v0307359.1
n.a. PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356531168|ref|XP_003534150.1| chr0 160434016 160436926 +
1 domain prediction
 –
Lj0g3v0343539.1
n.a. PREDICTED: multidrug and toxin extrusion protein 2-like [Solanum lycopersicum] gi|460372435|ref|XP_004232036.1| chr0 180097693 180098359 -
1 domain prediction
 –
Lj0g3v0343549.1
n.a. PREDICTED: multidrug and toxin extrusion protein 2-like [Solanum lycopersicum] gi|460372435|ref|XP_004232036.1| chr0 180098450 180099023 -
1 domain prediction
 –
Lj0g3v0349789.2
n.a. PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356531168|ref|XP_003534150.1| chr0 183710083 183713968 +
1 domain prediction
 –
Lj0g3v0349799.1
n.a. PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356531168|ref|XP_003534150.1| chr0 183715481 183716442 +
1 domain prediction
 –
Lj0g3v0351589.1
n.a. PREDICTED: MATE efflux family protein 5-like [Cicer arietinum] gi|502171804|ref|XP_004515105.1| chr0 184880580 184886180 +
1 domain prediction
 –
Lj0g3v0360329.1
n.a. Multidrug and toxin extrusion protein [Medicago truncatula] gi|357490223|ref|XP_003615399.1| chr0 189748875 189751667 -
1 domain prediction
 –
Lj0g3v0360329.2
n.a. Multidrug and toxin extrusion protein [Medicago truncatula] gi|357490223|ref|XP_003615399.1| chr0 189748875 189751667 -
1 domain prediction
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Lj1g3v1526050.1
n.a. PREDICTED: protein TRANSPARENT TESTA 12 [Glycine max] gi|356508053|ref|XP_003522776.1| chr1 18163581 18175135 -
1 domain prediction
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Lj1g3v1526130.1
n.a. PREDICTED: protein TRANSPARENT TESTA 12-like [Cicer arietinum] gi|502133190|ref|XP_004501678.1| chr1 18189390 18194075 -
1 domain prediction
 –
Lj1g3v2096220.1
n.a. Multidrug and toxin extrusion protein [Medicago truncatula] gi|357490223|ref|XP_003615399.1| chr1 25144499 25146706 +
1 domain prediction
 –
Lj1g3v2377970.1
n.a. PREDICTED: MATE efflux family protein 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502104312|ref|XP_004492499.1| chr1 28085406 28092631 +
1 domain prediction
 –
Lj1g3v2377970.2
n.a. PREDICTED: MATE efflux family protein 2, chloroplastic-like isoform X2 [Cicer arietinum] gi|502104315|ref|XP_004492500.1| chr1 28085555 28090582 +
1 domain prediction
 –
Lj1g3v2377970.3
n.a. MATE efflux family protein expressed [Medicago truncatula] gi|357506191|ref|XP_003623384.1| chr1 28085555 28092631 +
1 domain prediction
 –
Lj1g3v2692680.1
n.a. PREDICTED: protein TRANSPARENT TESTA 12-like [Cicer arietinum] gi|502105273|ref|XP_004492766.1| chr1 31255702 31257347 -
1 domain prediction
 –
Lj1g3v3256680.1
n.a. PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356515374|ref|XP_003526375.1| chr1 36775582 36779616 +
1 domain prediction
 –
Lj1g3v3256690.1
n.a. PREDICTED: MATE efflux family protein 8-like [Glycine max] gi|356573950|ref|XP_003555117.1| chr1 36781869 36786791 +
1 domain prediction
 –
Lj1g3v3256690.2
n.a. PREDICTED: MATE efflux family protein 8-like [Glycine max] gi|356569033|ref|XP_003552711.1| chr1 36781869 36795954 +
1 domain prediction
 –
Lj1g3v3256690.4
n.a. PREDICTED: MATE efflux family protein 8-like [Glycine max] gi|356569033|ref|XP_003552711.1| chr1 36792261 36795954 +
1 domain prediction
 –
Lj1g3v3256700.1
n.a. PREDICTED: MATE efflux family protein 7-like [Glycine max] gi|356499617|ref|XP_003518634.1| chr1 36797530 36805469 +
1 domain prediction
 –
Lj1g3v3444080.1
n.a. Ferric reductase defective 3b [Medicago truncatula] gi|357457739|ref|XP_003599150.1| chr1 39908880 39914335 -
1 domain prediction
 –
Lj1g3v4024010.1
n.a. Protein TRANSPARENT TESTA [Medicago truncatula] gi|357508983|ref|XP_003624780.1| chr1 47596352 47602252 +
1 domain prediction
 –
Lj1g3v4024010.2
n.a. PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356571816|ref|XP_003554068.1| chr1 47596352 47602252 +
1 domain prediction
 –
Lj1g3v4026060.1
n.a. Protein TRANSPARENT TESTA [Medicago truncatula] gi|357508985|ref|XP_003624781.1| chr1 47626103 47636527 +
1 domain prediction
 –
Lj2g3v0435450.1
n.a. PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine max] gi|356574471|ref|XP_003555370.1| chr2 6298699 6300664 +
1 domain prediction
 –