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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4405440 |
| Transcript ID | Lj1g3v4405440.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transporter ERD6-like 7-like [Cicer arietinum] gi|502109384|ref|XP_004493632.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | – | – | |
| PANTHER | 2 | 472 | 471 | 0 | – | |
| PANTHER | 2 | 472 | 471 | 0 | – | |
| SUPERFAMILY | 35 | 467 | 433 | 4.32E-56 | ||
| TMHMM | 35 | 57 | 23 | – | – | |
| Phobius | 36 | 58 | 23 | – | – | |
| ProSiteProfiles | 41 | 460 | 420 | 41.876 | ||
| CDD | 43 | 456 | 414 | 3.50E-19 | ||
| Gene3D | 44 | 220 | 177 | 6.80E-22 | – | |
| TIGRFAM | 47 | 466 | 420 | 1.30E-84 | ||
| Phobius | 59 | 77 | 19 | – | – | |
| Pfam | 67 | 469 | 403 | 3.90E-86 | ||
| TMHMM | 77 | 99 | 23 | – | – | |
| Phobius | 78 | 99 | 22 | – | – | |
| ProSitePatterns | 95 | 112 | 18 | – | ||
| Phobius | 100 | 105 | 6 | – | – | |
| TMHMM | 106 | 123 | 18 | – | – | |
| Phobius | 106 | 125 | 20 | – | – | |
| Phobius | 126 | 136 | 11 | – | – | |
| PRINTS | 132 | 151 | 20 | 6.10E-16 | ||
| TMHMM | 136 | 158 | 23 | – | – | |
| Phobius | 137 | 157 | 21 | – | – | |
| Phobius | 158 | 163 | 6 | – | – | |
| Phobius | 164 | 183 | 20 | – | – | |
| TMHMM | 165 | 187 | 23 | – | – | |
| Phobius | 184 | 188 | 5 | – | – | |
| Phobius | 189 | 210 | 22 | – | – | |
| TMHMM | 191 | 210 | 20 | – | – | |
| Phobius | 211 | 273 | 63 | – | – | |
| TMHMM | 270 | 292 | 23 | – | – | |
| Phobius | 274 | 296 | 23 | – | – | |
| Gene3D | 275 | 466 | 192 | 7.40E-15 | – | |
| PRINTS | 284 | 294 | 11 | 6.10E-16 | ||
| Phobius | 297 | 301 | 5 | – | – | |
| Phobius | 302 | 329 | 28 | – | – | |
| TMHMM | 307 | 329 | 23 | – | – | |
| ProSitePatterns | 325 | 342 | 18 | – | ||
| Phobius | 330 | 335 | 6 | – | – | |
| Phobius | 336 | 358 | 23 | – | – | |
| TMHMM | 336 | 358 | 23 | – | – | |
| Phobius | 359 | 369 | 11 | – | – | |
| Phobius | 370 | 395 | 26 | – | – | |
| TMHMM | 373 | 395 | 23 | – | – | |
| PRINTS | 373 | 394 | 22 | 6.10E-16 | ||
| PRINTS | 396 | 408 | 13 | 6.10E-16 | ||
| Phobius | 396 | 406 | 11 | – | – | |
| TMHMM | 407 | 429 | 23 | – | – | |
| Phobius | 407 | 426 | 20 | – | – | |
| Phobius | 427 | 437 | 11 | – | – | |
| TMHMM | 434 | 456 | 23 | – | – | |
| Phobius | 438 | 456 | 19 | – | – | |
| Phobius | 457 | 473 | 17 | – | – | |
| Coils | 464 | 473 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4405440.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4405440.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.