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Lj2g3v0878750.2

Overview

Field Value
Gene ID Lj2g3v0878750
Transcript ID Lj2g3v0878750.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable glutamate carboxypeptidase 2-like [Cicer arietinum] gi|502098190|ref|XP_004491175.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10404
6 309 304 3.00E-152 –
CDD
cd08022
6 192 187 6.73E-100 –
PANTHER
PTHR10404:SF45
6 309 304 3.00E-152 –
Gene3D
G3DSA:3.40.630.10
7 194 188 1.70E-64 –
SUPERFAMILY
SSF53187
7 189 183 3.43E-46 –
Pfam
PF04389
8 156 149 8.90E-14
IPR007484
MobiDBLite
mobidb-lite
87 108 22 – –
SUPERFAMILY
SSF47672
191 310 120 1.44E-26
IPR007365
Gene3D
G3DSA:1.20.930.40
196 309 114 2.90E-22
IPR007365
Coils
Coil
198 218 21 – –
Pfam
PF04253
217 309 93 9.40E-23
IPR007365
Coils
Coil
226 246 21 – –
Coils
Coil
252 272 21 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj2g3v0878750.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0878750.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.