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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007484
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.252s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0339149.1
n.a. PREDICTED: endoplasmic reticulum metallopeptidase 1-like isoform X2 [Cicer arietinum] gi|502118460|ref|XP_004496278.1| chr0 177643771 177652506 +
2 domain predictions
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Lj1g3v4763600.1
n.a. AMP1-like carboxypeptidase [Lotus japonicus] gi|429535563|dbj|BAM72481.1| chr1 57126626 57135642 +
2 domain predictions
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Lj1g3v4763600.2
n.a. AMP1-like carboxypeptidase [Lotus japonicus] gi|429535563|dbj|BAM72481.1| chr1 57126626 57132386 +
2 domain predictions
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Lj2g3v0878750.2
n.a. PREDICTED: probable glutamate carboxypeptidase 2-like [Cicer arietinum] gi|502098190|ref|XP_004491175.1| chr2 13470929 13473972 +
2 domain predictions
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Lj2g3v0878930.1
n.a. PREDICTED: probable glutamate carboxypeptidase 2-like [Glycine max] gi|356497577|ref|XP_003517636.1| chr2 13486493 13497974 +
2 domain predictions
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Lj2g3v0878930.2
n.a. PREDICTED: probable glutamate carboxypeptidase 2-like [Cicer arietinum] gi|502098190|ref|XP_004491175.1| chr2 13493621 13497974 +
2 domain predictions
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Lj2g3v0889190.2
n.a. PREDICTED: probable glutamate carboxypeptidase 2-like [Cicer arietinum] gi|502098190|ref|XP_004491175.1| chr2 13597450 13600785 +
2 domain predictions
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Lj4g3v2539320.3
n.a. PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Glycine max] gi|356512367|ref|XP_003524891.1| chr4 34190244 34197009 -
2 domain predictions
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Lj4g3v2539320.4
n.a. PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Glycine max] gi|356512367|ref|XP_003524891.1| chr4 34193236 34199948 -
2 domain predictions
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Lj4g3v2949950.3
n.a. PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Glycine max] gi|356512367|ref|XP_003524891.1| chr4 38971212 38977977 -
2 domain predictions
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Lj4g3v2949950.4
n.a. PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Glycine max] gi|356512367|ref|XP_003524891.1| chr4 38974204 38980916 -
2 domain predictions
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LotjaGi2g1v0225800.1
n.a. Glutamate carboxypeptidase 2; TAIR: AT5G19740.1 Peptidase M28 family protein; Swiss-Prot: sp|Q9M1S8|GCP2_ARATH Probable glutamate carboxypeptidase 2; TrEMBL-Plants: tr|A0A0B2S7Y3|A0A0B2S7Y3_GLYSO Putative glutamate carboxypeptidase 2; Found in the gene: LotjaGi2g1v0225800 LjG1.1_chr2 68296472 68301254 +
2 domain predictions
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LotjaGi2g1v0225900.1
n.a. Glutamate carboxypeptidase 2; TAIR: AT5G19740.1 Peptidase M28 family protein; Swiss-Prot: sp|Q9M1S8|GCP2_ARATH Probable glutamate carboxypeptidase 2; TrEMBL-Plants: tr|I1J4H3|I1J4H3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0225900 LjG1.1_chr2 68302945 68309122 +
2 domain predictions
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LotjaGi2g1v0225900.2
n.a. Glutamate carboxypeptidase 2; TAIR: AT5G19740.1 Peptidase M28 family protein; Swiss-Prot: sp|Q9M1S8|GCP2_ARATH Probable glutamate carboxypeptidase 2; TrEMBL-Plants: tr|I1J4H4|I1J4H4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0225900 LjG1.1_chr2 68303274 68306435 +
2 domain predictions
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LotjaGi2g1v0225900.3
n.a. Glutamate carboxypeptidase 2; TAIR: AT5G19740.1 Peptidase M28 family protein; Swiss-Prot: sp|Q9M1S8|GCP2_ARATH Probable glutamate carboxypeptidase 2; TrEMBL-Plants: tr|A0A0B2S7Y3|A0A0B2S7Y3_GLYSO Putative glutamate carboxypeptidase 2; Found in the gene: LotjaGi2g1v0225900 LjG1.1_chr2 68303274 68307459 +
2 domain predictions
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LotjaGi4g1v0364900.1
n.a. Endoplasmic reticulum metallopeptidase 1; TAIR: AT1G67420.2 Zn-dependent exopeptidases superfamily protein; Swiss-Prot: sp|Q7Z2K6|ERMP1_HUMAN Endoplasmic reticulum metallopeptidase 1; TrEMBL-Plants: tr|I1K3L0|I1K3L0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0364900 LjG1.1_chr4 74465902 74475696 -
2 domain predictions
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LotjaGi5g1v0274600.1
n.a. Endoplasmic reticulum metallopeptidase 1; TAIR: AT5G20660.1 Zn-dependent exopeptidases superfamily protein; Swiss-Prot: sp|Q3UVK0|ERMP1_MOUSE Endoplasmic reticulum metallopeptidase 1; TrEMBL-Plants: tr|G7I390|G7I390_MEDTR Endoplasmic reticulum metallopeptidase-like protein; Found in the gene: LotjaGi5g1v0274600 LjG1.1_chr5 58820496 58832425 -
2 domain predictions
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