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Lj3g3v0896950.2

Overview

Field Value
Gene ID Lj3g3v0896950
Transcript ID Lj3g3v0896950.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable serine/threonine-protein kinase DDB_G0280111-like isoform X1 [Cicer arietinum] gi|502164558|ref|XP_004513162.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22967:SF63
12 375 364 2.10E-210 –
PANTHER
PTHR22967
12 375 364 2.10E-210 –
CDD
cd13985
26 298 273 3.59E-133 –
ProSiteProfiles
PS50011
27 297 271 35.015
IPR000719
SMART
SM00220
27 291 265 7.50E-39
IPR000719
Gene3D
G3DSA:3.30.200.20
28 127 100 1.90E-18 –
SUPERFAMILY
SSF56112
28 338 311 3.01E-60
IPR011009
Pfam
PF00069
29 289 261 2.60E-39
IPR000719
Gene3D
G3DSA:1.10.510.10
128 348 221 1.30E-43 –
ProSitePatterns
PS00108
152 164 13 –
IPR008271
MobiDBLite
mobidb-lite
300 442 143 – –
Coils
Coil
491 546 56 – –
MobiDBLite
mobidb-lite
547 687 141 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj3g3v0896950.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0896950.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.