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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008271
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 2405 results. Now displaying 1 of 49 with 50 rows per page. This search has taken 6.001s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3023720.1
LjKlavier leucine-rich repeat receptor-like kinase [Lotus japonicus] gi|353677868|dbj|BAL04590.1| chr1 34474974 34479067 +
2 domain predictions
2 GO terms
Lj2g3v1467920.1
LjSymRK receptor-like kinase SYMRK [Lotus japonicus] gi|21622628|gb|AAM67418.1|AF492655_1 chr2 23244149 23250251 -
2 domain predictions
2 GO terms
Lj2g3v2904690.1
LjNfr1 Nod-factor receptor 1b [Lotus japonicus] gi|37651060|emb|CAE02590.1| chr2 37916948 37922957 +
2 domain predictions
2 GO terms
Lj3g3v1739280.1
LjCCaMK RecName: Full=Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase; Short=LjCCaMKgi|116634228|emb|CAJ76699.1| calcium calmodulin-dependent protein kinase [Lotus japonicus] gi|122250440|sp|A0AAR7.1|CCAMK_LOTJA chr3 21980800 21987089 +
2 domain predictions
2 GO terms
Lj3g3v3375770.1
LjHar1 hypernodulation aberrant root formation protein [Lotus japonicus] gi|24940156|emb|CAD42335.1| chr3 41520393 41525499 +
2 domain predictions
2 GO terms
Lj4g3v0281040.1
LjFls2 flagellin-sensing 2-like protein [Lotus japonicus] gi|355346200|gb|AER60531.1| chr4 3284600 3289068 +
2 domain predictions
2 GO terms
Lj0g3v0009119.1
n.a. PREDICTED: probable serine/threonine-protein kinase WNK5-like [Cicer arietinum] gi|502146388|ref|XP_004506432.1| chr0 3754445 3756874 -
2 domain predictions
2 GO terms
Lj0g3v0019539.1
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like isoform X2 [Cicer arietinum] gi|502083819|ref|XP_004487574.1| chr0 7745945 7749305 -
2 domain predictions
2 GO terms
Lj0g3v0022049.1
n.a. NAK-type protein kinase precursor [Glycine max] gi|351727489|ref|NP_001238698.1| chr0 8903111 8905216 +
2 domain predictions
2 GO terms
Lj0g3v0023009.1
n.a. Transmembrane kinase 1 isoform 2 [Theobroma cacao] gi|508711195|gb|EOY03092.1| chr0 9216087 9217700 +
2 domain predictions
2 GO terms
Lj0g3v0024809.1
n.a. PREDICTED: serine/threonine-protein kinase EDR1-like isoform X1 [Cicer arietinum] gi|502143842|ref|XP_004505487.1| chr0 9870862 9892442 -
2 domain predictions
2 GO terms
Lj0g3v0035439.1
n.a. PREDICTED: probable receptor-like protein kinase At1g11050-like [Cicer arietinum] gi|502124054|ref|XP_004498364.1| chr0 11295149 11297703 -
2 domain predictions
2 GO terms
Lj0g3v0038859.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Glycine max] gi|356509460|ref|XP_003523467.1| chr0 12655520 12663549 +
2 domain predictions
2 GO terms
Lj0g3v0042109.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514907|ref|XP_003526143.1| chr0 13847734 13849153 -
2 domain predictions
2 GO terms
Lj0g3v0048319.1
n.a. phosphoenolpyruvate carboxylase-related kinase 1 [Caragana korshinskii] gi|477382160|gb|AGI78245.1| chr0 16274390 16277916 +
2 domain predictions
2 GO terms
Lj0g3v0050299.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710-like [Glycine max] gi|356527105|ref|XP_003532154.1| chr0 17090362 17095739 +
2 domain predictions
2 GO terms
Lj0g3v0055799.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK5-like [Glycine max] gi|356509567|ref|XP_003523519.1| chr0 18085830 18086582 +
2 domain predictions
2 GO terms
Lj0g3v0058439.1
n.a. PREDICTED: probable receptor-like protein kinase At2g42960-like [Glycine max] gi|356501467|ref|XP_003519546.1| chr0 19220972 19225538 -
2 domain predictions
2 GO terms
Lj0g3v0059499.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166662|ref|XP_004513950.1| chr0 19683288 19688507 +
2 domain predictions
2 GO terms
Lj0g3v0059509.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356545297|ref|XP_003541080.1| chr0 19690149 19694423 +
2 domain predictions
2 GO terms
Lj0g3v0059919.1
n.a. PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Cicer arietinum] gi|502082392|ref|XP_004487152.1| chr0 19889238 19906617 -
2 domain predictions
2 GO terms
Lj0g3v0061859.1
n.a. PREDICTED: probable receptor-like protein kinase At5g47070-like [Cicer arietinum] gi|502152552|ref|XP_004508979.1| chr0 20771290 20775478 +
2 domain predictions
2 GO terms
Lj0g3v0063059.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g28960-like [Glycine max] gi|356565948|ref|XP_003551197.1| chr0 21276027 21279326 +
2 domain predictions
2 GO terms
Lj0g3v0063939.1
n.a. PREDICTED: serine/threonine-protein kinase TIO-like [Cicer arietinum] gi|502164656|ref|XP_004513201.1| chr0 21855100 21857616 +
2 domain predictions
2 GO terms
Lj0g3v0064079.1
n.a. PREDICTED: probable serine/threonine-protein kinase WNK4-like [Glycine max] gi|356570080|ref|XP_003553219.1| chr0 21961647 21967978 +
2 domain predictions
2 GO terms
Lj0g3v0065639.1
n.a. PREDICTED: somatic embryogenesis receptor kinase 2-like [Cicer arietinum] gi|502118782|ref|XP_004496399.1| chr0 22860880 22867955 -
2 domain predictions
2 GO terms
Lj0g3v0065639.2
n.a. PREDICTED: somatic embryogenesis receptor kinase 1-like [Glycine max] gi|356576127|ref|XP_003556185.1| chr0 22860880 22867426 -
2 domain predictions
2 GO terms
Lj0g3v0066389.2
n.a. PREDICTED: serine/threonine-protein kinase Nek5-like [Glycine max] gi|356550080|ref|XP_003543418.1| chr0 23347244 23353172 -
2 domain predictions
2 GO terms
Lj0g3v0067549.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Glycine max] gi|356516754|ref|XP_003527058.1| chr0 23998624 24003883 -
2 domain predictions
2 GO terms
Lj0g3v0067549.2
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Glycine max] gi|356516754|ref|XP_003527058.1| chr0 23998624 24003883 -
2 domain predictions
2 GO terms
Lj0g3v0067799.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356575773|ref|XP_003556011.1| chr0 24129425 24131578 -
2 domain predictions
2 GO terms
Lj0g3v0067799.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356575773|ref|XP_003556011.1| chr0 24129425 24131578 -
2 domain predictions
2 GO terms
Lj0g3v0067829.1
n.a. PREDICTED: serine/threonine-protein kinase SAPK3-like [Cicer arietinum] gi|502152528|ref|XP_004508967.1| chr0 24148142 24151680 +
2 domain predictions
2 GO terms
Lj0g3v0067889.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK1-like [Glycine max] gi|356521887|ref|XP_003529582.1| chr0 24185210 24190043 +
2 domain predictions
2 GO terms
Lj0g3v0072519.1
n.a. PREDICTED: protein kinase APK1B, chloroplastic-like [Glycine max] gi|356506672|ref|XP_003522100.1| chr0 26909470 26914375 -
2 domain predictions
2 GO terms
Lj0g3v0073239.1
n.a. PREDICTED: checkpoint serine/threonine-protein kinase BUB1-like [Glycine max] gi|356544986|ref|XP_003540927.1| chr0 27426913 27431697 +
2 domain predictions
2 GO terms
Lj0g3v0073509.1
n.a. Shaggy-related protein kinase [Medicago truncatula] gi|357452871|ref|XP_003596712.1| chr0 27591478 27594395 -
2 domain predictions
2 GO terms
Lj0g3v0073629.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.5-like [Glycine max] gi|356498420|ref|XP_003518050.1| chr0 27656698 27659079 +
2 domain predictions
2 GO terms
Lj0g3v0073739.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max] gi|356541852|ref|XP_003539386.1| chr0 27722307 27727642 +
2 domain predictions
2 GO terms
Lj0g3v0073739.2
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max] gi|356541852|ref|XP_003539386.1| chr0 27722307 27727642 +
2 domain predictions
2 GO terms
Lj0g3v0075369.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502135214|ref|XP_004502257.1| chr0 28565917 28573472 +
2 domain predictions
2 GO terms
Lj0g3v0075699.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|358346449|ref|XP_003637280.1| chr0 28803126 28805909 +
2 domain predictions
2 GO terms
Lj0g3v0077409.1
n.a. PREDICTED: LOW QUALITY PROTEIN: calcium-dependent protein kinase 13-like [Glycine max] gi|356566682|ref|XP_003551559.1| chr0 29704192 29708082 -
2 domain predictions
2 GO terms
Lj0g3v0078479.1
n.a. PREDICTED: receptor like protein kinase S.2-like [Glycine max] gi|356503214|ref|XP_003520406.1| chr0 30211687 30214919 -
2 domain predictions
2 GO terms
Lj0g3v0083059.1
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62857012|dbj|BAD95891.1| chr0 32749920 32755086 -
2 domain predictions
2 GO terms
Lj0g3v0083519.1
n.a. PREDICTED: probable receptor-like protein kinase At5g15080-like [Cicer arietinum] gi|502155065|ref|XP_004509947.1| chr0 33105730 33108989 +
2 domain predictions
2 GO terms
Lj0g3v0084029.1
n.a. PREDICTED: LOW QUALITY PROTEIN: wall-associated receptor kinase 2-like [Cicer arietinum] gi|502136069|ref|XP_004502549.1| chr0 33421371 33426989 +
2 domain predictions
2 GO terms
Lj0g3v0088019.1
n.a. Lectin receptor-like kinase Tg-20 [Medicago truncatula] gi|357517167|ref|XP_003628872.1| chr0 35898490 35900862 -
2 domain predictions
2 GO terms
Lj0g3v0089219.1
n.a. PREDICTED: serine/threonine-protein kinase WNK8-like isoform X2 [Cicer arietinum] gi|502134290|ref|XP_004502065.1| chr0 36593243 36596326 -
2 domain predictions
2 GO terms
Lj0g3v0089219.2
n.a. No lysine kinase 10 isoform 1 [Theobroma cacao] gi|508776675|gb|EOY23931.1| chr0 36594714 36596301 -
2 domain predictions
2 GO terms