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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1683570 |
| Transcript ID | Lj3g3v1683570.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | multidrug resistance pump [Glycine max] gi|343761168|gb|AEM55566.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 56 | 56 | 6.70E-301 | – | |
| Phobius | 1 | 120 | 120 | – | – | |
| TIGRFAM | 1 | 436 | 436 | 1.00E-130 | ||
| PANTHER | 1 | 56 | 56 | 6.70E-301 | – | |
| CDD | 2 | 456 | 455 | 1.61E-103 | – | |
| TMHMM | 15 | 34 | 20 | – | – | |
| PANTHER | 105 | 465 | 361 | 6.70E-301 | – | |
| PANTHER | 105 | 465 | 361 | 6.70E-301 | – | |
| Pfam | 117 | 209 | 93 | 8.90E-12 | ||
| TMHMM | 118 | 140 | 23 | – | – | |
| Phobius | 121 | 143 | 23 | – | – | |
| Phobius | 144 | 162 | 19 | – | – | |
| Phobius | 163 | 183 | 21 | – | – | |
| TMHMM | 164 | 186 | 23 | – | – | |
| Phobius | 184 | 211 | 28 | – | – | |
| Phobius | 212 | 238 | 27 | – | – | |
| TMHMM | 216 | 238 | 23 | – | – | |
| Phobius | 239 | 263 | 25 | – | – | |
| TMHMM | 263 | 285 | 23 | – | – | |
| Phobius | 264 | 285 | 22 | – | – | |
| Pfam | 268 | 421 | 154 | 1.10E-13 | ||
| Phobius | 286 | 296 | 11 | – | – | |
| TMHMM | 297 | 319 | 23 | – | – | |
| Phobius | 297 | 320 | 24 | – | – | |
| Phobius | 321 | 339 | 19 | – | – | |
| TMHMM | 339 | 361 | 23 | – | – | |
| Phobius | 340 | 362 | 23 | – | – | |
| Phobius | 363 | 373 | 11 | – | – | |
| TMHMM | 373 | 395 | 23 | – | – | |
| Phobius | 374 | 395 | 22 | – | – | |
| Phobius | 396 | 406 | 11 | – | – | |
| TMHMM | 405 | 427 | 23 | – | – | |
| Phobius | 407 | 439 | 33 | – | – | |
| TMHMM | 432 | 454 | 23 | – | – | |
| Phobius | 440 | 466 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v1683570.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1683570.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.