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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1947710 |
| Transcript ID | Lj4g3v1947710.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: S-acyltransferase TIP1-like [Cicer arietinum] gi|502151388|ref|XP_004508416.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 279 | 279 | – | – | |
| MobiDBLite | 1 | 37 | 37 | – | – | |
| SUPERFAMILY | 26 | 258 | 233 | 2.09E-56 | ||
| PANTHER | 33 | 366 | 334 | 2.10E-210 | – | |
| PANTHER | 33 | 366 | 334 | 2.10E-210 | – | |
| ProSiteProfiles | 35 | 257 | 223 | 49.605 | ||
| SMART | 35 | 65 | 31 | 1700 | ||
| Gene3D | 41 | 263 | 223 | 2.40E-57 | ||
| Pfam | 42 | 133 | 92 | 6.60E-12 | ||
| SMART | 69 | 98 | 30 | 0.044 | ||
| ProSiteProfiles | 69 | 101 | 33 | 9.644 | ||
| CDD | 97 | 223 | 127 | 1.95E-33 | – | |
| ProSiteProfiles | 102 | 134 | 33 | 13.143 | ||
| SMART | 102 | 131 | 30 | 5.50E-04 | ||
| Pfam | 141 | 227 | 87 | 4.00E-13 | ||
| SMART | 169 | 201 | 33 | 0.22 | ||
| ProSiteProfiles | 169 | 201 | 33 | 10.312 | ||
| SMART | 202 | 233 | 32 | 0.0055 | ||
| ProSiteProfiles | 202 | 234 | 33 | 9.965 | ||
| SMART | 237 | 266 | 30 | 1700 | ||
| Phobius | 280 | 304 | 25 | – | – | |
| TMHMM | 281 | 303 | 23 | – | – | |
| Phobius | 305 | 309 | 5 | – | – | |
| TMHMM | 310 | 332 | 23 | – | – | |
| Phobius | 310 | 333 | 24 | – | – | |
| Phobius | 334 | 395 | 62 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v1947710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1947710.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.