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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0081960 |
| Transcript ID | Lj5g3v0081960.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356552151|ref|XP_003544433.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 34 | 34 | – | – | |
| PANTHER | 2 | 481 | 480 | 0 | – | |
| PANTHER | 2 | 481 | 480 | 0 | – | |
| CDD | 31 | 466 | 436 | 4.79E-157 | – | |
| Phobius | 35 | 58 | 24 | – | – | |
| TMHMM | 38 | 60 | 23 | – | – | |
| Pfam | 41 | 201 | 161 | 1.20E-34 | ||
| TIGRFAM | 41 | 437 | 397 | 1.70E-75 | ||
| Phobius | 59 | 77 | 19 | – | – | |
| TMHMM | 75 | 97 | 23 | – | – | |
| Phobius | 78 | 96 | 19 | – | – | |
| Phobius | 97 | 116 | 20 | – | – | |
| Phobius | 117 | 134 | 18 | – | – | |
| TMHMM | 117 | 139 | 23 | – | – | |
| Phobius | 135 | 153 | 19 | – | – | |
| TMHMM | 154 | 171 | 18 | – | – | |
| Phobius | 154 | 171 | 18 | – | – | |
| Phobius | 172 | 182 | 11 | – | – | |
| TMHMM | 183 | 202 | 20 | – | – | |
| Phobius | 183 | 203 | 21 | – | – | |
| Phobius | 204 | 214 | 11 | – | – | |
| TMHMM | 212 | 234 | 23 | – | – | |
| Phobius | 215 | 234 | 20 | – | – | |
| Phobius | 235 | 254 | 20 | – | – | |
| TMHMM | 255 | 277 | 23 | – | – | |
| Phobius | 255 | 281 | 27 | – | – | |
| Pfam | 262 | 422 | 161 | 7.30E-25 | ||
| Phobius | 282 | 292 | 11 | – | – | |
| TMHMM | 292 | 314 | 23 | – | – | |
| Phobius | 293 | 312 | 20 | – | – | |
| Phobius | 313 | 331 | 19 | – | – | |
| Phobius | 332 | 356 | 25 | – | – | |
| TMHMM | 334 | 356 | 23 | – | – | |
| Phobius | 357 | 375 | 19 | – | – | |
| TMHMM | 376 | 398 | 23 | – | – | |
| Phobius | 376 | 398 | 23 | – | – | |
| Phobius | 399 | 404 | 6 | – | – | |
| Phobius | 405 | 429 | 25 | – | – | |
| TMHMM | 411 | 433 | 23 | – | – | |
| Phobius | 430 | 434 | 5 | – | – | |
| Phobius | 435 | 454 | 20 | – | – | |
| TMHMM | 438 | 460 | 23 | – | – | |
| Phobius | 455 | 482 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0081960.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0081960.2, powered by CORGI.
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