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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0106080 |
| Transcript ID | Lj5g3v0106080.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transporter ERD6-like 6-like [Cicer arietinum] gi|502126054|ref|XP_004499162.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| ProSiteProfiles | 1 | 224 | 224 | 15.908 | ||
| PANTHER | 1 | 224 | 224 | 2.20E-151 | – | |
| PANTHER | 1 | 224 | 224 | 2.20E-151 | – | |
| SUPERFAMILY | 2 | 210 | 209 | 5.23E-19 | ||
| TMHMM | 10 | 32 | 23 | – | – | |
| Pfam | 10 | 224 | 215 | 1.90E-42 | ||
| Phobius | 12 | 33 | 22 | – | – | |
| Phobius | 34 | 92 | 59 | – | – | |
| Gene3D | 89 | 219 | 131 | 1.50E-08 | – | |
| Phobius | 93 | 118 | 26 | – | – | |
| TMHMM | 94 | 116 | 23 | – | – | |
| PRINTS | 107 | 117 | 11 | 6.60E-05 | ||
| Phobius | 119 | 132 | 14 | – | – | |
| TMHMM | 131 | 153 | 23 | – | – | |
| Phobius | 133 | 153 | 21 | – | – | |
| Phobius | 154 | 159 | 6 | – | – | |
| Phobius | 160 | 182 | 23 | – | – | |
| TMHMM | 160 | 182 | 23 | – | – | |
| Phobius | 183 | 193 | 11 | – | – | |
| TMHMM | 192 | 214 | 23 | – | – | |
| Phobius | 194 | 222 | 29 | – | – | |
| PRINTS | 201 | 222 | 22 | 6.60E-05 | ||
| Phobius | 223 | 224 | 2 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0106080.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0106080.2, powered by CORGI.
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