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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0391170 |
| Transcript ID | Lj5g3v0391170.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: K(+) efflux antiporter 6-like [Glycine max] gi|356562191|ref|XP_003549355.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | – | – | |
| Phobius | 1 | 32 | 32 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 10 | 25 | 16 | – | – | |
| Phobius | 26 | 32 | 7 | – | – | |
| Phobius | 33 | 153 | 121 | – | – | |
| PANTHER | 59 | 573 | 515 | 0 | – | |
| PANTHER | 59 | 573 | 515 | 0 | – | |
| Phobius | 154 | 175 | 22 | – | – | |
| TMHMM | 159 | 181 | 23 | – | – | |
| Pfam | 159 | 528 | 370 | 1.90E-69 | ||
| Phobius | 176 | 181 | 6 | – | – | |
| Phobius | 182 | 198 | 17 | – | – | |
| Phobius | 199 | 203 | 5 | – | – | |
| TMHMM | 201 | 220 | 20 | – | – | |
| Phobius | 204 | 221 | 18 | – | – | |
| Phobius | 222 | 232 | 11 | – | – | |
| TMHMM | 233 | 255 | 23 | – | – | |
| Phobius | 233 | 254 | 22 | – | – | |
| Phobius | 255 | 265 | 11 | – | – | |
| TMHMM | 265 | 284 | 20 | – | – | |
| Phobius | 266 | 284 | 19 | – | – | |
| Phobius | 285 | 295 | 11 | – | – | |
| Phobius | 296 | 318 | 23 | – | – | |
| TMHMM | 296 | 318 | 23 | – | – | |
| Phobius | 319 | 323 | 5 | – | – | |
| Phobius | 324 | 348 | 25 | – | – | |
| TMHMM | 328 | 350 | 23 | – | – | |
| Phobius | 349 | 368 | 20 | – | – | |
| Phobius | 369 | 385 | 17 | – | – | |
| Phobius | 386 | 390 | 5 | – | – | |
| Phobius | 391 | 408 | 18 | – | – | |
| Phobius | 409 | 419 | 11 | – | – | |
| TMHMM | 420 | 442 | 23 | – | – | |
| Phobius | 420 | 441 | 22 | – | – | |
| Phobius | 442 | 446 | 5 | – | – | |
| TMHMM | 447 | 469 | 23 | – | – | |
| Phobius | 447 | 466 | 20 | – | – | |
| Phobius | 467 | 477 | 11 | – | – | |
| TMHMM | 476 | 498 | 23 | – | – | |
| Phobius | 478 | 496 | 19 | – | – | |
| Phobius | 497 | 507 | 11 | – | – | |
| Phobius | 508 | 527 | 20 | – | – | |
| TMHMM | 508 | 530 | 23 | – | – | |
| Phobius | 528 | 577 | 50 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0391170.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0391170.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.