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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0469120 |
| Transcript ID | Lj5g3v0469120.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: G-protein coupled receptor 1-like isoform X2 [Cicer arietinum] gi|502125199|ref|XP_004498838.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 16 | 16 | – | – | |
| PANTHER | 9 | 289 | 281 | 3.60E-86 | – | |
| PANTHER | 9 | 289 | 281 | 3.60E-86 | – | |
| Gene3D | 16 | 287 | 272 | 2.50E-10 | – | |
| SUPERFAMILY | 16 | 290 | 275 | 4.03E-15 | – | |
| Phobius | 17 | 42 | 26 | – | – | |
| PRINTS | 19 | 34 | 16 | 1.80E-123 | ||
| ProSiteProfiles | 19 | 273 | 255 | 21.777 | ||
| TMHMM | 20 | 42 | 23 | – | – | |
| Pfam | 28 | 273 | 246 | 1.80E-13 | – | |
| PRINTS | 30 | 48 | 19 | 8.40E-53 | ||
| PRINTS | 36 | 50 | 15 | 1.80E-123 | ||
| Phobius | 43 | 53 | 11 | – | – | |
| PRINTS | 49 | 64 | 16 | 8.40E-53 | ||
| PRINTS | 52 | 74 | 23 | 1.80E-123 | ||
| TMHMM | 54 | 71 | 18 | – | – | |
| Phobius | 54 | 72 | 19 | – | – | |
| Phobius | 73 | 83 | 11 | – | – | |
| PRINTS | 80 | 98 | 19 | 8.40E-53 | ||
| PRINTS | 82 | 95 | 14 | 1.80E-123 | ||
| Phobius | 84 | 105 | 22 | – | – | |
| TMHMM | 84 | 106 | 23 | – | – | |
| PRINTS | 97 | 115 | 19 | 1.80E-123 | ||
| Phobius | 106 | 124 | 19 | – | – | |
| TMHMM | 119 | 141 | 23 | – | – | |
| PRINTS | 120 | 135 | 16 | 1.80E-123 | ||
| Phobius | 125 | 141 | 17 | – | – | |
| Phobius | 142 | 160 | 19 | – | – | |
| PRINTS | 159 | 171 | 13 | 1.80E-123 | ||
| TMHMM | 161 | 183 | 23 | – | – | |
| Phobius | 161 | 185 | 25 | – | – | |
| PRINTS | 172 | 195 | 24 | 1.80E-123 | ||
| Phobius | 186 | 217 | 32 | – | – | |
| PRINTS | 215 | 236 | 22 | 1.80E-123 | ||
| TMHMM | 218 | 237 | 20 | – | – | |
| Phobius | 218 | 235 | 18 | – | – | |
| PRINTS | 221 | 239 | 19 | 8.40E-53 | ||
| Phobius | 236 | 246 | 11 | – | – | |
| PRINTS | 245 | 262 | 18 | 1.80E-123 | ||
| TMHMM | 247 | 269 | 23 | – | – | |
| Phobius | 247 | 269 | 23 | – | – | |
| PRINTS | 253 | 272 | 20 | 8.40E-53 | ||
| PRINTS | 263 | 279 | 17 | 1.80E-123 | ||
| Phobius | 270 | 319 | 50 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane signaling receptor activity | Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction. | ||
| Biological process | Cell surface receptor signaling pathway | A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj5g3v0469120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0469120.1, powered by CORGI.
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