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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1427750 |
| Transcript ID | Lj5g3v1427750.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NHX1-like protein [Lotus tenuis] gi|190411133|gb|ACE78322.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 7 | 120 | 114 | 1.10E-81 | ||
| PANTHER | 7 | 120 | 114 | 1.10E-81 | ||
| Pfam | 9 | 132 | 124 | 1.70E-10 | ||
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 12 | 31 | 20 | – | – | |
| Phobius | 32 | 42 | 11 | – | – | |
| Phobius | 43 | 63 | 21 | – | – | |
| TMHMM | 45 | 63 | 19 | – | – | |
| Phobius | 64 | 82 | 19 | – | – | |
| TMHMM | 78 | 100 | 23 | – | – | |
| Phobius | 83 | 106 | 24 | – | – | |
| Phobius | 107 | 117 | 11 | – | – | |
| Phobius | 118 | 137 | 20 | – | – | |
| TMHMM | 120 | 142 | 23 | – | – | |
| Phobius | 138 | 147 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v1427750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1427750.1, powered by CORGI.
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