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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018422
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 28 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.846s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0177699.1
n.a. Sodium/hydrogen exchanger [Medicago truncatula] gi|357441573|ref|XP_003591064.1| chr0 86031617 86036077 -
2 domain predictions
3 GO terms
Lj0g3v0177699.2
n.a. Sodium/hydrogen exchanger [Medicago truncatula] gi|357441573|ref|XP_003591064.1| chr0 86031617 86036077 -
2 domain predictions
3 GO terms
Lj1g3v4955360.1
n.a. PREDICTED: sodium/hydrogen exchanger 2-like [Cicer arietinum] gi|502113467|ref|XP_004494660.1| chr1 60316443 60319828 -
2 domain predictions
3 GO terms
Lj4g3v0073550.1
n.a. PREDICTED: sodium/hydrogen exchanger 6-like [Cicer arietinum] gi|502079921|ref|XP_004486408.1| chr4 623186 631500 +
2 domain predictions
3 GO terms
Lj4g3v0153960.1
n.a. PREDICTED: sodium/hydrogen exchanger 7-like isoform X2 [Cicer arietinum] gi|502141734|ref|XP_004504612.1| chr4 1839829 1866614 -
2 domain predictions
3 GO terms
Lj4g3v0153960.2
n.a. PREDICTED: sodium/hydrogen exchanger 7-like isoform X2 [Cicer arietinum] gi|502141734|ref|XP_004504612.1| chr4 1857724 1875492 -
2 domain predictions
3 GO terms
Lj4g3v0153960.3
n.a. PREDICTED: sodium/hydrogen exchanger 7-like isoform X2 [Cicer arietinum] gi|502141734|ref|XP_004504612.1| chr4 1857724 1864695 -
2 domain predictions
3 GO terms
Lj4g3v2373730.1
n.a. PREDICTED: sodium/hydrogen exchanger 2-like [Glycine max] gi|356519996|ref|XP_003528654.1| chr4 32702521 32706983 +
2 domain predictions
3 GO terms
Lj4g3v2373730.2
n.a. PREDICTED: sodium/hydrogen exchanger 2-like [Glycine max] gi|356564575|ref|XP_003550527.1| chr4 32702521 32713209 +
2 domain predictions
3 GO terms
Lj5g3v1427750.1
n.a. NHX1-like protein [Lotus tenuis] gi|190411133|gb|ACE78322.1| chr5 21285017 21290107 +
2 domain predictions
3 GO terms
Lj5g3v1427750.2
n.a. NHX1-like protein [Lotus tenuis] gi|190411133|gb|ACE78322.1| chr5 21288638 21290107 +
2 domain predictions
3 GO terms
Lj5g3v1427760.1
n.a. NHX1-like protein [Lotus tenuis] gi|190411133|gb|ACE78322.1| chr5 21288927 21290674 +
2 domain predictions
3 GO terms
Lj5g3v1452260.1
n.a. PREDICTED: sodium/hydrogen exchanger 1-like [Cicer arietinum] gi|502117231|ref|XP_004495748.1| chr5 21463588 21467563 +
2 domain predictions
3 GO terms
Lj6g3v0469780.1
n.a. PREDICTED: sodium/hydrogen exchanger 1-like [Cicer arietinum] gi|502117231|ref|XP_004495748.1| chr6 4610990 4614966 +
2 domain predictions
3 GO terms
LotjaGi1g1v0777200.1
n.a. Sodium/hydrogen exchanger; TAIR: AT3G05030.1 sodium hydrogen exchanger 2; Swiss-Prot: sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2; TrEMBL-Plants: tr|I1JRJ0|I1JRJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0777200 LjG1.1_chr1 134926326 134931536 -
2 domain predictions
3 GO terms
LotjaGi2g1v0213400_LC.1
n.a. Sodium/hydrogen exchanger; TAIR: AT3G05030.3 sodium hydrogen exchanger 2; Swiss-Prot: sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2; TrEMBL-Plants: tr|B3VBF0|B3VBF0_9FABA Sodium/hydrogen exchanger; Found in the gene: LotjaGi2g1v0213400_LC LjG1.1_chr2 66238042 66241994 -
2 domain predictions
3 GO terms
LotjaGi2g1v0213400_LC.2
n.a. Sodium/hydrogen exchanger; TAIR: AT3G05030.3 sodium hydrogen exchanger 2; Swiss-Prot: sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2; TrEMBL-Plants: tr|B3VBF0|B3VBF0_9FABA Sodium/hydrogen exchanger; Found in the gene: LotjaGi2g1v0213400_LC LjG1.1_chr2 66238288 66241992 -
2 domain predictions
3 GO terms
LotjaGi4g1v0016200.1
n.a. Salt overly sensitive 1; TAIR: AT2G01980.1 sodium proton exchanger, putative (NHX7) (SOS1); Swiss-Prot: sp|Q9LKW9|NHX7_ARATH Sodium/hydrogen exchanger 7; TrEMBL-Plants: tr|H9CDQ2|H9CDQ2_SOYBN SOS1; Found in the gene: LotjaGi4g1v0016200 LjG1.1_chr4 1991467 2000706 -
2 domain predictions
3 GO terms
LotjaGi4g1v0016200.2
n.a. Sodium/hydrogen exchanger 1; TAIR: AT2G01980.1 sodium proton exchanger, putative (NHX7) (SOS1); Swiss-Prot: sp|Q9LKW9|NHX7_ARATH Sodium/hydrogen exchanger 7; TrEMBL-Plants: tr|H9CDQ2|H9CDQ2_SOYBN SOS1; Found in the gene: LotjaGi4g1v0016200 LjG1.1_chr4 1991520 2007050 -
2 domain predictions
3 GO terms
LotjaGi4g1v0016200.3
n.a. Sodium/hydrogen exchanger 1; TAIR: AT2G01980.1 sodium proton exchanger, putative (NHX7) (SOS1); Swiss-Prot: sp|Q9LKW9|NHX7_ARATH Sodium/hydrogen exchanger 7; TrEMBL-Plants: tr|H9CDQ2|H9CDQ2_SOYBN SOS1; Found in the gene: LotjaGi4g1v0016200 LjG1.1_chr4 2009495 2032440 -
2 domain predictions
3 GO terms
LotjaGi4g1v0346500.1
n.a. Sodium/hydrogen exchanger; TAIR: AT3G05030.1 sodium hydrogen exchanger 2; Swiss-Prot: sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2; TrEMBL-Plants: tr|A0A1J7HZV2|A0A1J7HZV2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0346500 LjG1.1_chr4 72574651 72586362 +
2 domain predictions
3 GO terms
LotjaGi4g1v0346500.2
n.a. Sodium/hydrogen exchanger; TAIR: AT3G05030.1 sodium hydrogen exchanger 2; Swiss-Prot: sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2; TrEMBL-Plants: tr|A0A1J7HZV2|A0A1J7HZV2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0346500 LjG1.1_chr4 72575128 72578811 +
2 domain predictions
3 GO terms
LotjaGi5g1v0216900.1
n.a. Sodium/hydrogen exchanger; TAIR: AT3G05030.1 sodium hydrogen exchanger 2; Swiss-Prot: sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2; TrEMBL-Plants: tr|B3VBF0|B3VBF0_9FABA Sodium/hydrogen exchanger; Found in the gene: LotjaGi5g1v0216900 LjG1.1_chr5 52309881 52315745 +
2 domain predictions
3 GO terms
LotjaGi5g1v0216900.2
n.a. Sodium/hydrogen exchanger; TAIR: AT3G05030.1 sodium hydrogen exchanger 2; Swiss-Prot: sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2; TrEMBL-Plants: tr|B3VBF0|B3VBF0_9FABA Sodium/hydrogen exchanger; Found in the gene: LotjaGi5g1v0216900 LjG1.1_chr5 52310828 52315290 +
2 domain predictions
3 GO terms
LotjaGi6g1v0151400.1
n.a. Sodium/hydrogen exchanger; TAIR: AT5G55470.1 Na+/H+ (sodium hydrogen) exchanger 3; Swiss-Prot: sp|Q8S397|NHX4_ARATH Sodium/hydrogen exchanger 4; TrEMBL-Plants: tr|G7J1F4|G7J1F4_MEDTR Sodium/hydrogen exchanger; Found in the gene: LotjaGi6g1v0151400 LjG1.1_chr6 42799717 42805133 +
2 domain predictions
3 GO terms
LotjaGi6g1v0278200.1
n.a. Sodium/hydrogen exchanger; TAIR: AT1G79610.1 Na+/H+ antiporter 6; Swiss-Prot: sp|Q8RWU6|NHX6_ARATH Sodium/hydrogen exchanger 6; TrEMBL-Plants: tr|I1MFX0|I1MFX0_SOYBN Sodium/hydrogen exchanger; Found in the gene: LotjaGi6g1v0278200 LjG1.1_chr6 59499120 59507285 +
2 domain predictions
3 GO terms
LotjaGi6g1v0278200.2
n.a. Sodium/hydrogen exchanger; TAIR: AT1G79610.1 Na+/H+ antiporter 6; Swiss-Prot: sp|Q8RWU6|NHX6_ARATH Sodium/hydrogen exchanger 6; TrEMBL-Plants: tr|I1MFX0|I1MFX0_SOYBN Sodium/hydrogen exchanger; Found in the gene: LotjaGi6g1v0278200 LjG1.1_chr6 59499312 59505731 +
2 domain predictions
3 GO terms
LotjaGi6g1v0278200.3
n.a. Sodium/hydrogen exchanger; TAIR: AT1G79610.1 Na+/H+ antiporter 6; Swiss-Prot: sp|Q8RWU6|NHX6_ARATH Sodium/hydrogen exchanger 6; TrEMBL-Plants: tr|I1MFX0|I1MFX0_SOYBN Sodium/hydrogen exchanger; Found in the gene: LotjaGi6g1v0278200 LjG1.1_chr6 59499336 59505731 +
2 domain predictions
3 GO terms