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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1696740 |
| Transcript ID | Lj5g3v1696740.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Uncharacterized protein isoform 1 [Theobroma cacao] gi|508702969|gb|EOX94865.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1940 | 1940 | 0 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 1 | 1940 | 1940 | 0 | ||
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 12 | 35 | 24 | – | – | |
| Phobius | 36 | 80 | 45 | – | – | |
| Phobius | 81 | 101 | 21 | – | – | |
| TMHMM | 84 | 106 | 23 | – | – | |
| Phobius | 102 | 120 | 19 | – | – | |
| TMHMM | 121 | 143 | 23 | – | – | |
| Phobius | 121 | 145 | 25 | – | – | |
| Phobius | 146 | 254 | 109 | – | – | |
| TMHMM | 253 | 275 | 23 | – | – | |
| Phobius | 255 | 273 | 19 | – | – | |
| Phobius | 274 | 278 | 5 | – | – | |
| Phobius | 279 | 298 | 20 | – | – | |
| TMHMM | 279 | 298 | 20 | – | – | |
| Phobius | 299 | 309 | 11 | – | – | |
| Phobius | 310 | 333 | 24 | – | – | |
| TMHMM | 311 | 333 | 23 | – | – | |
| Phobius | 334 | 352 | 19 | – | – | |
| Phobius | 353 | 370 | 18 | – | – | |
| TMHMM | 353 | 370 | 18 | – | – | |
| Phobius | 371 | 406 | 36 | – | – | |
| Phobius | 407 | 428 | 22 | – | – | |
| TMHMM | 407 | 429 | 23 | – | – | |
| Phobius | 429 | 447 | 19 | – | – | |
| Phobius | 448 | 465 | 18 | – | – | |
| Phobius | 466 | 476 | 11 | – | – | |
| Phobius | 477 | 494 | 18 | – | – | |
| Phobius | 495 | 499 | 5 | – | – | |
| Phobius | 500 | 517 | 18 | – | – | |
| Phobius | 518 | 638 | 121 | – | – | |
| Phobius | 639 | 657 | 19 | – | – | |
| Phobius | 658 | 662 | 5 | – | – | |
| Phobius | 663 | 691 | 29 | – | – | |
| TMHMM | 663 | 685 | 23 | – | – | |
| Phobius | 692 | 697 | 6 | – | – | |
| Phobius | 698 | 717 | 20 | – | – | |
| TMHMM | 698 | 717 | 20 | – | – | |
| Phobius | 718 | 761 | 44 | – | – | |
| Phobius | 762 | 779 | 18 | – | – | |
| TMHMM | 762 | 779 | 18 | – | – | |
| Phobius | 780 | 822 | 43 | – | – | |
| TMHMM | 821 | 843 | 23 | – | – | |
| Phobius | 823 | 841 | 19 | – | – | |
| Phobius | 842 | 846 | 5 | – | – | |
| TMHMM | 847 | 864 | 18 | – | – | |
| Phobius | 847 | 864 | 18 | – | – | |
| Phobius | 865 | 875 | 11 | – | – | |
| Phobius | 876 | 893 | 18 | – | – | |
| TMHMM | 876 | 895 | 20 | – | – | |
| Phobius | 894 | 922 | 29 | – | – | |
| Phobius | 923 | 944 | 22 | – | – | |
| TMHMM | 927 | 949 | 23 | – | – | |
| Phobius | 945 | 1229 | 285 | – | – | |
| Coils | 984 | 1007 | 24 | – | – | |
| TMHMM | 1230 | 1252 | 23 | – | – | |
| Phobius | 1230 | 1256 | 27 | – | – | |
| Phobius | 1257 | 1267 | 11 | – | – | |
| TMHMM | 1267 | 1284 | 18 | – | – | |
| Phobius | 1268 | 1288 | 21 | – | – | |
| Phobius | 1289 | 1317 | 29 | – | – | |
| TMHMM | 1317 | 1339 | 23 | – | – | |
| Phobius | 1318 | 1338 | 21 | – | – | |
| Phobius | 1339 | 1372 | 34 | – | – | |
| TMHMM | 1373 | 1392 | 20 | – | – | |
| Phobius | 1373 | 1392 | 20 | – | – | |
| Phobius | 1393 | 1537 | 145 | – | – | |
| Phobius | 1538 | 1561 | 24 | – | – | |
| TMHMM | 1539 | 1561 | 23 | – | – | |
| Phobius | 1562 | 1580 | 19 | – | – | |
| TMHMM | 1581 | 1603 | 23 | – | – | |
| Phobius | 1581 | 1601 | 21 | – | – | |
| Phobius | 1602 | 1607 | 6 | – | – | |
| TMHMM | 1608 | 1625 | 18 | – | – | |
| Phobius | 1608 | 1627 | 20 | – | – | |
| Phobius | 1628 | 1638 | 11 | – | – | |
| Phobius | 1639 | 1663 | 25 | – | – | |
| TMHMM | 1640 | 1662 | 23 | – | – | |
| Phobius | 1664 | 1751 | 88 | – | – | |
| Pfam | 1691 | 1936 | 246 | 3.00E-65 | ||
| Phobius | 1752 | 1773 | 22 | – | – | |
| TMHMM | 1753 | 1775 | 23 | – | – | |
| Phobius | 1774 | 1942 | 169 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Mechanosensitive ion channel activity | Enables the transmembrane transfer of an ion by a channel that opens in response to a mechanical stress. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj5g3v1696740.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1696740.2, powered by CORGI.
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