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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR031334
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.343s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4955120.1
n.a. Protein FAM38B [Medicago truncatula] gi|357512079|ref|XP_003626328.1| chr1 60184929 60202511 +
2 domain predictions
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Lj5g3v1696740.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508702969|gb|EOX94865.1| chr5 24025035 24051206 -
2 domain predictions
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Lj5g3v1696740.2
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508702969|gb|EOX94865.1| chr5 24026063 24051206 -
2 domain predictions
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LotjaGi1g1v0775800.1
n.a. Piezo-type mechanosensitive ion channel-like protein; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|G7KZQ3|G7KZQ3_MEDTR DUF3595 family protein; Found in the gene: LotjaGi1g1v0775800 LjG1.1_chr1 134796044 134813793 +
2 domain predictions
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LotjaGi1g1v0775800.2
n.a. piezo-type mechanosensitive ion channel component; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|G7KZQ3|G7KZQ3_MEDTR DUF3595 family protein; Found in the gene: LotjaGi1g1v0775800 LjG1.1_chr1 134797045 134813172 +
2 domain predictions
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LotjaGi1g1v0775800.3
n.a. piezo-type mechanosensitive ion channel component; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|G7KZQ3|G7KZQ3_MEDTR DUF3595 family protein; Found in the gene: LotjaGi1g1v0775800 LjG1.1_chr1 134797875 134813172 +
2 domain predictions
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LotjaGi5g1v0259600.1
n.a. piezo-type mechanosensitive ion channel component; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|A0A072VYZ6|A0A072VYZ6_MEDTR DUF3595 family protein; Found in the gene: LotjaGi5g1v0259600 LjG1.1_chr5 56793358 56820171 +
2 domain predictions
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LotjaGi5g1v0259600.2
n.a. piezo-type mechanosensitive ion channel component; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|K7LGZ8|K7LGZ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0259600 LjG1.1_chr5 56793358 56820171 +
2 domain predictions
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LotjaGi5g1v0259600.3
n.a. piezo-type mechanosensitive ion channel component; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|K7LGZ8|K7LGZ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0259600 LjG1.1_chr5 56793383 56821203 +
2 domain predictions
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LotjaGi5g1v0259600.4
n.a. piezo-type mechanosensitive ion channel component; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|K7LGZ8|K7LGZ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0259600 LjG1.1_chr5 56794381 56819365 +
2 domain predictions
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LotjaGi5g1v0259600.5
n.a. piezo-type mechanosensitive ion channel component; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|A0A072VYZ6|A0A072VYZ6_MEDTR DUF3595 family protein; Found in the gene: LotjaGi5g1v0259600 LjG1.1_chr5 56794558 56819365 +
2 domain predictions
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LotjaGi5g1v0259600.6
n.a. piezo-type mechanosensitive ion channel component; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|K7LGZ8|K7LGZ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0259600 LjG1.1_chr5 56794558 56819365 +
2 domain predictions
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LotjaGi5g1v0259600.7
n.a. piezo-type mechanosensitive ion channel component; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|A0A072VYZ6|A0A072VYZ6_MEDTR DUF3595 family protein; Found in the gene: LotjaGi5g1v0259600 LjG1.1_chr5 56799274 56819365 +
2 domain predictions
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LotjaGi5g1v0259600.8
n.a. piezo-type mechanosensitive ion channel component; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|A0A072VYZ6|A0A072VYZ6_MEDTR DUF3595 family protein; Found in the gene: LotjaGi5g1v0259600 LjG1.1_chr5 56799638 56819365 +
2 domain predictions
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LotjaGi5g1v0259600.9
n.a. piezo-type mechanosensitive ion channel component; TAIR: AT2G48060.2 piezo-type mechanosensitive ion channel component; Swiss-Prot: sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog; TrEMBL-Plants: tr|A0A072VYZ6|A0A072VYZ6_MEDTR DUF3595 family protein; Found in the gene: LotjaGi5g1v0259600 LjG1.1_chr5 56801130 56819365 +
2 domain predictions
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