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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1162910 |
| Transcript ID | Lj6g3v1162910.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: respiratory burst oxidase homolog protein E-like [Glycine max] gi|356558443|ref|XP_003547516.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 373 | 373 | – | – | |
| MobiDBLite | 1 | 37 | 37 | – | – | |
| MobiDBLite | 78 | 103 | 26 | – | – | |
| PANTHER | 118 | 659 | 542 | 0 | – | |
| PANTHER | 118 | 659 | 542 | 0 | – | |
| SFLD | 132 | 659 | 528 | 0 | – | |
| Coils | 148 | 168 | 21 | – | – | |
| Pfam | 157 | 257 | 101 | 4.80E-40 | ||
| SUPERFAMILY | 180 | 340 | 161 | 1.01E-19 | ||
| Gene3D | 187 | 327 | 141 | 1.10E-11 | ||
| CDD | 237 | 284 | 48 | 2.06E-07 | ||
| ProSiteProfiles | 254 | 289 | 36 | 11.026 | ||
| ProSitePatterns | 267 | 279 | 13 | – | ||
| Phobius | 374 | 394 | 21 | – | – | |
| TMHMM | 378 | 397 | 20 | – | – | |
| SFLD | 379 | 659 | 281 | 4.80E-18 | – | |
| Phobius | 395 | 456 | 62 | – | – | |
| Pfam | 417 | 571 | 155 | 7.30E-19 | ||
| Phobius | 457 | 475 | 19 | – | – | |
| Phobius | 476 | 515 | 40 | – | – | |
| TMHMM | 510 | 532 | 23 | – | – | |
| Phobius | 516 | 535 | 20 | – | – | |
| Phobius | 536 | 555 | 20 | – | – | |
| Phobius | 556 | 578 | 23 | – | – | |
| TMHMM | 558 | 580 | 23 | – | – | |
| Phobius | 579 | 583 | 5 | – | – | |
| Phobius | 584 | 602 | 19 | – | – | |
| Phobius | 603 | 659 | 57 | – | – | |
| SUPERFAMILY | 613 | 653 | 41 | 5.50E-06 | ||
| Pfam | 614 | 659 | 46 | 1.80E-09 | ||
| Gene3D | 614 | 653 | 40 | 1.60E-04 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj6g3v1162910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1162910.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.