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| Field | Value |
|---|---|
| Gene ID | LotjaGi0g1v0002200 |
| Transcript ID | LotjaGi0g1v0002200.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine synthase; TAIR: AT2G36880.1 methionine adenosyltransferase 3; Swiss-Prot: sp|Q6SYB9|METK2_TOBAC S-adenosylmethionine synthase 2; TrEMBL-Plants: tr|A0A0L9TX93|A0A0L9TX93_PHAAN S-adenosylmethionine synthase; Found in the gene: LotjaGi0g1v0002200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr0:1949130..1951074) extracted from Lotus japonicus Gifu genome v1.2.
AAATCTCGCCACTTTTTCTACCATTAGATTCACATCTTATACAAATTTCAGACAAAAAAACCAATGACTAGTATTTAATA TTCAGTGTATTGCTTTTTCTTGGATCCTGGTTTCATATCAGTGTCTATTTTCAAGTGTGAATGATTTACTTTGGTACCAC AGATTTAGTAACTTTAACAATTAATTGGATATGCATGAATGATGCAATAGTAATTACTGCCTTCATTAGACAACCCCTAT CTTAAATCGTTTGCTTCTATTCAAATCAATTAAAGTAACATTTTTTTTCATGAACAGAGATGGAAACCTTTCTGTTCACC TCAGAATCTGTAAACGAAGGCCATCCAGACAAGATCTGTGACCAGGTTTCCGACGCCATCCTCGATGCGTGCTTGGAGCA GGACCCAGAGAGCAAGGTAGCCTGCGAGACATGCACAAAAACCAACATGGTTATGGTCTTTGGCGAGATCACAACCAAGG CGAAGGTGAACTACGAGAAGATCGTCCGAGACACATGTAGGGGAATTGGGTTCGTCTCCGCTGATGTCGGTCTCGACGCT GACAAGTGCAACGTCCTTGTCAACATTGAGCAGCAGAGCCCTGACATTGCCCAAGGAGTTCACGGTCACTTGACCAAGAA GCCAGAGGAAATTGGAGCTGGTGACCAAGGCCACATGTTTGGCTATGCCACAGATGAAACAGCTGAACTGATGCCACTCA CTCATGTGCTTGCTACGAAGCTCGGTGCTAAGCTCACTGAAGTGAGGAAGAACAAGACATGCCCGTGGTTGAGGCCTGAT GGGAAGACCCAAGTGACTGTTGAGTACAAGAATGATAATGGAGCCATGATTCCAATTCGTGTGCACACGGTTCTCATCTC AACTCAGCATGATGAAACTGTGACTAATGATCAGATTGCCAAAGACTTGAAAGAGCATGTGATTACACCTGTGATCCCAG CTGAATACCTTGATGACAAGACTATCTTCCACCTTAACCCTTCAGGTACAGATCAATCTAGGTGCTATAAAAATGTGGCA TTAGCCCCCAAGAGAAGTTTTTTTTTTTTAATAAAGGAGTATTCAAATATTTGTACGTTTTAGGAGTGGTAATGTTAATG CGGGCTAACTCACCTCATCCGGCTTTCAGCCAGCTTAAAGCGGGTTGAGTCAAGTTGACCTACCAATGAATATGGGTTCA AAATGCCAACTCGTCCCACATATTTGGTGGTTTGGCGAGTTGCGAGTAAAAGATATAAAAGACAATAATAATATGTGGAT TAGGAGGGCGGGATAAGCGGGCTCGCGAGCTGAATTTTTTAACTCGCCTGGCGGGTTAACCAGATTGGCTCGGCGAGCTA AACCCACATTGTCACGCCTAGTATTTTTACAATGTCTTTTTTAATTTATCATTGTTAATTTTGCTTAATATGTTTATTTC ATCCCGGATTCATTTTTTCTGGTTCTGTCCATTTACAGGTAGGTTTGTGATTGGTGGGCCCCATGGAGATGCAGGGCTCA CAGGCCGCAAGATCATTATCGATACCTATGGAGGGTGGGGTGCTCATGGTGGAGGTGCCTTCTCAGGCAAGGACCCAACC AAGGTTGATAGAAGTGGTGCATACATTGTTAGGCAGGCTGCAAAAAGTGTAGTAGCTTCAGGGCTTGCACGTCGTTGCAT TGTGCAGGTTTCTTATGCAATTGGAGTGCCAGAGCCACTGTCTGTGTTTGTGGACACCTACAAAACAGGGAAGATTCCAG ACAATGATATTTTGGGTCTGATTAAGGAGAATTTTGATTTCAGGCCTGGAATGATTTCCATCAATCTTGACCTCCAAAGA GGAGGAAACTTCAGGTACCAGAAAACTGCTGCTTATGGCCATTTTGGACGAGATGATTCTGATTTCACATGGGAGACTGT GAAAATGCTCAAGCCCAAGGCTTGA
CDS sequence (LotjaGi0g1v0002200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACCTTTCTGTTCACCTCAGAATCTGTAAACGAAGGCCATCCAGACAAGATCTGTGACCAGGTTTCCGACGCCAT CCTCGATGCGTGCTTGGAGCAGGACCCAGAGAGCAAGGTAGCCTGCGAGACATGCACAAAAACCAACATGGTTATGGTCT TTGGCGAGATCACAACCAAGGCGAAGGTGAACTACGAGAAGATCGTCCGAGACACATGTAGGGGAATTGGGTTCGTCTCC GCTGATGTCGGTCTCGACGCTGACAAGTGCAACGTCCTTGTCAACATTGAGCAGCAGAGCCCTGACATTGCCCAAGGAGT TCACGGTCACTTGACCAAGAAGCCAGAGGAAATTGGAGCTGGTGACCAAGGCCACATGTTTGGCTATGCCACAGATGAAA CAGCTGAACTGATGCCACTCACTCATGTGCTTGCTACGAAGCTCGGTGCTAAGCTCACTGAAGTGAGGAAGAACAAGACA TGCCCGTGGTTGAGGCCTGATGGGAAGACCCAAGTGACTGTTGAGTACAAGAATGATAATGGAGCCATGATTCCAATTCG TGTGCACACGGTTCTCATCTCAACTCAGCATGATGAAACTGTGACTAATGATCAGATTGCCAAAGACTTGAAAGAGCATG TGATTACACCTGTGATCCCAGCTGAATACCTTGATGACAAGACTATCTTCCACCTTAACCCTTCAGGTAGGTTTGTGATT GGTGGGCCCCATGGAGATGCAGGGCTCACAGGCCGCAAGATCATTATCGATACCTATGGAGGGTGGGGTGCTCATGGTGG AGGTGCCTTCTCAGGCAAGGACCCAACCAAGGTTTCTTATGCAATTGGAGTGCCAGAGCCACTGTCTGTGTTTGTGGACA CCTACAAAACAGGGAAGATTCCAGACAATGATATTTTGGGTCTGATTAAGGAGAATTTTGATTTCAGGCCTGGAATGATT TCCATCAATCTTGACCTCCAAAGAGGAGGAAACTTCAGGTACCAGAAAACTGCTGCTTATGGCCATTTTGGACGAGATGA TTCTGATTTCACATGGGAGACTGTGAAAATGCTCAAGCCCAAGGCTTGA
Protein sequence (LotjaGi0g1v0002200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
METFLFTSESVNEGHPDKICDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVS ADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETAELMPLTHVLATKLGAKLTEVRKNKT CPWLRPDGKTQVTVEYKNDNGAMIPIRVHTVLISTQHDETVTNDQIAKDLKEHVITPVIPAEYLDDKTIFHLNPSGRFVI GGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVSYAIGVPEPLSVFVDTYKTGKIPDNDILGLIKENFDFRPGMI SINLDLQRGGNFRYQKTAAYGHFGRDDSDFTWETVKMLKPKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 278 | 278 | 3.1E-245 | ||
| PANTHER | 1 | 278 | 278 | 3.1E-245 | – | |
| PIRSF | 1 | 279 | 279 | 1.5E-118 | ||
| SUPERFAMILY | 3 | 109 | 107 | 4.32E-47 | ||
| Pfam | 4 | 101 | 98 | 1.1E-42 | ||
| TIGRFAM | 5 | 278 | 274 | 1.1E-124 | ||
| Gene3D | 5 | 242 | 238 | 5.4E-126 | – | |
| CDD | 5 | 356 | 352 | 0.0 | – | |
| Gene3D | 11 | 275 | 265 | 5.4E-126 | – | |
| SUPERFAMILY | 115 | 239 | 125 | 8.24E-53 | ||
| Gene3D | 117 | 139 | 23 | 5.4E-126 | – | |
| Pfam | 117 | 238 | 122 | 1.9E-47 | ||
| ProSitePatterns | 119 | 129 | 11 | - | ||
| Pfam | 240 | 278 | 39 | 8.3E-19 | ||
| SUPERFAMILY | 240 | 358 | 119 | 2.75E-43 | ||
| ProSitePatterns | 266 | 274 | 9 | - | ||
| Gene3D | 276 | 362 | 87 | 3.3E-29 | – | |
| Pfam | 277 | 353 | 77 | 8.4E-20 | ||
| PANTHER | 277 | 362 | 86 | 3.1E-245 | ||
| PANTHER | 277 | 362 | 86 | 3.1E-245 | – | |
| PIRSF | 277 | 362 | 86 | 5.6E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methionine adenosyltransferase activity | Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | S-adenosylmethionine biosynthetic process | The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism. |
Expression pattern of LotjaGi0g1v0002200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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