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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0009500 |
| Transcript ID | LotjaGi1g1v0009500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-transporting ATPase; TAIR: AT3G22910.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; Swiss-Prot: sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type; TrEMBL-Plants: tr|G7KEN1|G7KEN1_MEDTR Cation-transporting ATPase plant; Found in the gene: LotjaGi1g1v0009500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1210645..1214571) extracted from Lotus japonicus Gifu genome v1.2.
CTTTCCTTTTGTTCTTGTTTGATCTTATAACCTTCTTCCTTAAATCCTTACCTATCCGAGTCTTAGTTTCACAATTAGCG TAGAATCTAAACTATAGCATTATATGATAAATCCAAACATGTGTCTCTTAGATTTGGAATTATTGTCTCTTAGATTTGCT TTCCTTTTAAAGTAGGCCTCTCAACCTCCTCCCTCATCATTTTTTGAGTTATCAATTTCCTTTCAAAAGTGCCTCTTAGA TTCCAACAAACTTGGACTTGTTCAGCTTGACTTATCAAAAAGCAACTCCAATCAATCTAGTTCTTCCTGTCTCCTCCACC TTAATTACTGTCCAAGCAATCATGTCCTCAGCTGGTGATGATGATGATGCCAACATTGAACTTGGTGCTACCTTTCTCCT CACCACCACTAGCACTAGCAGAAACAGCAAGTACAGCAAGATATGGCGTAGAACCTCCTTAAACATAAGCTTCCTCATCT CTTTGAAGAAGTCAACATCTGCTAATGAGTCTCCTCCACCATCACCACTTTCTTCAGTGCCATACACCTCATTGTCTCCC TCTGAGCCTCCAGCTAGAACCTCCTCTTCCAAATCTTGTGTTGAAATTGATGTAGAGGAAGGAGAAGAAGATGCAGAAGA AGGGCACATTAGGAATGATATTGCAAGGATTGTGAAGGAGAAGGACTTGAAATCACTGAATGACCTTGGTGGGGTCAACC GTGTGTGTGATGTTCTTCATGATCAACGCCGACACTCAGAGTCAGAGGTATCAACCTGCATATATAATTGGGATAATGGC CTTTTCTTCAACAATTAAAGTTTTTTTAAAAAAAAGAACAAAGTCCTCAATTTCAGAAGCAAATCATTTAACTGTGAATA TATTTCCTAATTTGTCTTTGAGGTTTTGGACAAAGATATAATATTATGTTCACTCTTGTGTTATGTTGTTTGCCTCATTG AATATTTTCAAGTTTTGAAGATGCATTATGTTGATGGGATTTTGGTTTTATGCACAGGAGAGCTCTAGTGAGAATGAGGT CCTTGGTGTGTTGGGCTCCACAGTGCAAGTTCATGGAACAAGCTTCTCCAGGTTTTTGTTGATTAGCTTCAAACAGAACC GTTACACAATTTCAATGCTATTGATTGCAGCTGGATTGACACTTGCCACAGGGTTCAAGCAAGAGGGAGCTAGATATGGT TGGCATGATGGTGTTGCTATAGTTTTTGCTGCTATGGTCCTGGTTGCATTCTCTTCAATAGCAAACTTCTGGCGTCAAAG AGAAATGATGAAATTGGCAAAGAGAAGGGGCAAGTTGGAATTCACAGTTCAAAGAGGTGAAGGATGCACAACAAAAGTTG CCATATCAGACATTAAGGTCGGTGACAAGGTGCGTCTGGGGCAGAATGATGAGGTTCCAGCAGATGGTTTGCTTGTAAAT GGTGACATCCTTGTGATGGAAGAGGCAACACAAAGCAAAAGAGATTGTGAGGGGAACCCATTTCTTGTAGCTGGTTCAAA GGTGCTTGAGGGTCATGGACTGATGCTTGTAGCATCAGTTGGATCTTTGGCTGAGATGCCAAGATCTATAGGTCTCAAAA TGGGTCAGGCTCGACGGACAGACCCAAAAATGTGTTGGCTCGCTGCGGGCCGACACCAGCCGGAACTGACACCCCTACAG AGCTCAATGAGTTACAATTCTGAAAAGGGATGCTTGCTGGGGAGTCTAATTGAGAAGCCAATTTCATACATTGACAAAGC TTCTCTTCTTATCTTCACCCTGGATGTGCTTGTAGTTTTCATTCGCCTAACTTGTAAGAAGGATGGAGATAGTAACGGGT TGCCGGAAATTAAGGGGAATGTCTCACTTGGCATGGTGATGGAAGTCCTTGAGAAATTATTTTTGAGACCACCAGGAAGG ATTTTCATCTTCACAGGTCTTTTCACTGTTGTGGTACTATGTGTGCAACATGGTGTGCCACTTATGGTTACTATGTCTCT CAATGACCAGATTGATAAGGTAGAATCAGACCAAGATGATGCAGTTCTTCATGATTTATCAGCTTGTACAACAATGGGGT TGGTAACTGTCATCTGCATTGATGTATCAGGTGGGCTTATATCTAAACCAATGGAAGTTAGCAGAATATGGATGGGGGAG ACAGAGATCAGCAACAAGGTTGAGGGATCAGAAACAGATCTAGTTGTGCTTGAAGTCCTTAAACAAGGAGTTGGTTTATC AATTCTTGCACCTGAACTTTCTCTTTCTCCAATGTCCCGTTCACTTGTTTTTTGGGCAGAAACAGCATGGGAAATGAACA TGAAATCTCTCACAGAAAATTTTGACATTCTTAACCACAGAAATTTGAGTTCTGACAAAGAAGGAAGTGGAGTTTTGGTG AGAAAAGCTGGGGCCAATGAACAAGCTCTGCACTTACACTGGAGTGGGGCTGCATCCACAATATTGGAAATGTGCTCACA TTACTATGATGGTGAAGGAGAATGTTGTTCCATGGAAAATCAGAAAATCAAATTTGGACAGGTGATTCAAGAGATGGAGG AGAGTGGCCTAAAACCAATTGCATTTGCTCATAGAGAAACACAGGTGGAAGAACTTGAGCAAGATGAATTGATCTTGATC GGATTGATAGGCCTCAAATACACATGCCAAGAATCAACAAAAGTAGCTTTGAAAAAACTCAGAGATACTAAAATAAAGAT CAAATTGGTCTCAGGGGATGACATCATGTCAGTGAAAGATATAGCTTGTGATCTGGGACTAGGAATGGAAGAGATAGAAG GTGGACATGTTGAAGGCAAACAACTTCAAGATTTGCATTGCAAAGCTAGACTAGAGAAAGTGGATCAAGCCAATGTAATG GGAAGTTTCAGCCTTGAAGATAAGCTTGACATGGTGCAGTGCTTGCAAGAGAAAGGTCATGTAGTTGCATTCATTGGAAG AAATTTAAGTCATGCTTCAGTTCTCAAGGTAGCTGATGTAGGGATAGTTCATGATTCTCAGGGTAGAATAATGCACAGAG AGAGTTCTGGTATATCTATCAAATGTTTCAGTGCATTGAAACCAATTGTGAGGGCTGGCAGAAGTAAATATCTTAATATT CAGAAGTTCATTCAACTTCAGCTTACATTCAACATCTCAGGGTTACTCATATCCTTCATGACAACCGTATCCACTGGAAA TTCACCCCTAACAGCAATTCAATTGATTTGGGTGAATGTGCTAATGTGCCTTCTAGGTTGCATCATGATGGTAATGGAGT TAAGCAGTGAGGAACAACTTGCAAATCCACCATCTAATAGGAATCAACCAATCATAACCATTGATATATGGAAAAACATA GTCATTCAAGTCTTTTATCAAGCATTTGCATGCATGGTACTTGAATTTGGAGGACATGTTAGTGACTGGGAAAAGAGAGT GAGGACAACCATGATCTTCAACACATTCCTACTGTGCCAAATCTTCAATCAGCTCAACATCATGGGTTTGTTGAAAAGGG AAATTCTCAAGATTGTTGTTCTTCAGAGATACTTTTTTTTATTCTTGGTGGGCTTAGGTGGTTGTTTCCTTGTGCAAGTG TTGGTGATTGAGTATGCAAAAGGCCTAGCAGATGGCATGGGCTTGAATGCTACTCAATGGGCTATATGTATCCTGGTTGG TGCTCTTTCATGGGTAATTCAATGGGCTTTGAGGAATCTTCCAGATTTTCTTAGAACTTATTGTACTTCAGCATCAAATA CTCCAGAGTCCATTACCCAACCATCATGGTTCTATTTTTTTCATTTGCGATTCTCCTTTTGGTCTGTGTAGTGGCAGGTT AACTTGACACGCGCATGTAGTAGGGACTCGAATCCTTTTTTTTATGATGACACGGTGCAGGGACTCGAATCCATGTTATG AATGAAG
CDS sequence (LotjaGi1g1v0009500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTCAGCTGGTGATGATGATGATGCCAACATTGAACTTGGTGCTACCTTTCTCCTCACCACCACTAGCACTAGCAG AAACAGCAAGTACAGCAAGATATGGCGTAGAACCTCCTTAAACATAAGCTTCCTCATCTCTTTGAAGAAGTCAACATCTG CTAATGAGTCTCCTCCACCATCACCACTTTCTTCAGTGCCATACACCTCATTGTCTCCCTCTGAGCCTCCAGCTAGAACC TCCTCTTCCAAATCTTGTGTTGAAATTGATGTAGAGGAAGGAGAAGAAGATGCAGAAGAAGGGCACATTAGGAATGATAT TGCAAGGATTGTGAAGGAGAAGGACTTGAAATCACTGAATGACCTTGGTGGGGTCAACCGTGTGTGTGATGTTCTTCATG ATCAACGCCGACACTCAGAGTCAGAGAGCTCTAGTGAGAATGAGGTCCTTGGTGTGTTGGGCTCCACAGTGCAAGTTCAT GGAACAAGCTTCTCCAGGTTTTTGTTGATTAGCTTCAAACAGAACCGTTACACAATTTCAATGCTATTGATTGCAGCTGG ATTGACACTTGCCACAGGGTTCAAGCAAGAGGGAGCTAGATATGGTTGGCATGATGGTGTTGCTATAGTTTTTGCTGCTA TGGTCCTGGTTGCATTCTCTTCAATAGCAAACTTCTGGCGTCAAAGAGAAATGATGAAATTGGCAAAGAGAAGGGGCAAG TTGGAATTCACAGTTCAAAGAGGTGAAGGATGCACAACAAAAGTTGCCATATCAGACATTAAGGTCGGTGACAAGGTGCG TCTGGGGCAGAATGATGAGGTTCCAGCAGATGGTTTGCTTGTAAATGGTGACATCCTTGTGATGGAAGAGGCAACACAAA GCAAAAGAGATTGTGAGGGGAACCCATTTCTTGTAGCTGGTTCAAAGGTGCTTGAGGGTCATGGACTGATGCTTGTAGCA TCAGTTGGATCTTTGGCTGAGATGCCAAGATCTATAGGTCTCAAAATGGGTCAGGCTCGACGGACAGACCCAAAAATGTG TTGGCTCGCTGCGGGCCGACACCAGCCGGAACTGACACCCCTACAGAGCTCAATGAGTTACAATTCTGAAAAGGGATGCT TGCTGGGGAGTCTAATTGAGAAGCCAATTTCATACATTGACAAAGCTTCTCTTCTTATCTTCACCCTGGATGTGCTTGTA GTTTTCATTCGCCTAACTTGTAAGAAGGATGGAGATAGTAACGGGTTGCCGGAAATTAAGGGGAATGTCTCACTTGGCAT GGTGATGGAAGTCCTTGAGAAATTATTTTTGAGACCACCAGGAAGGATTTTCATCTTCACAGGTCTTTTCACTGTTGTGG TACTATGTGTGCAACATGGTGTGCCACTTATGGTTACTATGTCTCTCAATGACCAGATTGATAAGGTAGAATCAGACCAA GATGATGCAGTTCTTCATGATTTATCAGCTTGTACAACAATGGGGTTGGTAACTGTCATCTGCATTGATGTATCAGGTGG GCTTATATCTAAACCAATGGAAGTTAGCAGAATATGGATGGGGGAGACAGAGATCAGCAACAAGGTTGAGGGATCAGAAA CAGATCTAGTTGTGCTTGAAGTCCTTAAACAAGGAGTTGGTTTATCAATTCTTGCACCTGAACTTTCTCTTTCTCCAATG TCCCGTTCACTTGTTTTTTGGGCAGAAACAGCATGGGAAATGAACATGAAATCTCTCACAGAAAATTTTGACATTCTTAA CCACAGAAATTTGAGTTCTGACAAAGAAGGAAGTGGAGTTTTGGTGAGAAAAGCTGGGGCCAATGAACAAGCTCTGCACT TACACTGGAGTGGGGCTGCATCCACAATATTGGAAATGTGCTCACATTACTATGATGGTGAAGGAGAATGTTGTTCCATG GAAAATCAGAAAATCAAATTTGGACAGGTGATTCAAGAGATGGAGGAGAGTGGCCTAAAACCAATTGCATTTGCTCATAG AGAAACACAGGTGGAAGAACTTGAGCAAGATGAATTGATCTTGATCGGATTGATAGGCCTCAAATACACATGCCAAGAAT CAACAAAAGTAGCTTTGAAAAAACTCAGAGATACTAAAATAAAGATCAAATTGGTCTCAGGGGATGACATCATGTCAGTG AAAGATATAGCTTGTGATCTGGGACTAGGAATGGAAGAGATAGAAGGTGGACATGTTGAAGGCAAACAACTTCAAGATTT GCATTGCAAAGCTAGACTAGAGAAAGTGGATCAAGCCAATGTAATGGGAAGTTTCAGCCTTGAAGATAAGCTTGACATGG TGCAGTGCTTGCAAGAGAAAGGTCATGTAGTTGCATTCATTGGAAGAAATTTAAGTCATGCTTCAGTTCTCAAGGTAGCT GATGTAGGGATAGTTCATGATTCTCAGGGTAGAATAATGCACAGAGAGAGTTCTGGTATATCTATCAAATGTTTCAGTGC ATTGAAACCAATTGTGAGGGCTGGCAGAAGTAAATATCTTAATATTCAGAAGTTCATTCAACTTCAGCTTACATTCAACA TCTCAGGGTTACTCATATCCTTCATGACAACCGTATCCACTGGAAATTCACCCCTAACAGCAATTCAATTGATTTGGGTG AATGTGCTAATGTGCCTTCTAGGTTGCATCATGATGGTAATGGAGTTAAGCAGTGAGGAACAACTTGCAAATCCACCATC TAATAGGAATCAACCAATCATAACCATTGATATATGGAAAAACATAGTCATTCAAGTCTTTTATCAAGCATTTGCATGCA TGGTACTTGAATTTGGAGGACATGTTAGTGACTGGGAAAAGAGAGTGAGGACAACCATGATCTTCAACACATTCCTACTG TGCCAAATCTTCAATCAGCTCAACATCATGGGTTTGTTGAAAAGGGAAATTCTCAAGATTGTTGTTCTTCAGAGATACTT TTTTTTATTCTTGGTGGGCTTAGGTGGTTGTTTCCTTGTGCAAGTGTTGGTGATTGAGTATGCAAAAGGCCTAGCAGATG GCATGGGCTTGAATGCTACTCAATGGGCTATATGTATCCTGGTTGGTGCTCTTTCATGGGTAATTCAATGGGCTTTGAGG AATCTTCCAGATTTTCTTAGAACTTATTGTACTTCAGCATCAAATACTCCAGAGTCCATTACCCAACCATCATGGTTCTA TTTTTTTCATTTGCGATTCTCCTTTTGGTCTGTGTAG
Protein sequence (LotjaGi1g1v0009500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSAGDDDDANIELGATFLLTTTSTSRNSKYSKIWRRTSLNISFLISLKKSTSANESPPPSPLSSVPYTSLSPSEPPART SSSKSCVEIDVEEGEEDAEEGHIRNDIARIVKEKDLKSLNDLGGVNRVCDVLHDQRRHSESESSSENEVLGVLGSTVQVH GTSFSRFLLISFKQNRYTISMLLIAAGLTLATGFKQEGARYGWHDGVAIVFAAMVLVAFSSIANFWRQREMMKLAKRRGK LEFTVQRGEGCTTKVAISDIKVGDKVRLGQNDEVPADGLLVNGDILVMEEATQSKRDCEGNPFLVAGSKVLEGHGLMLVA SVGSLAEMPRSIGLKMGQARRTDPKMCWLAAGRHQPELTPLQSSMSYNSEKGCLLGSLIEKPISYIDKASLLIFTLDVLV VFIRLTCKKDGDSNGLPEIKGNVSLGMVMEVLEKLFLRPPGRIFIFTGLFTVVVLCVQHGVPLMVTMSLNDQIDKVESDQ DDAVLHDLSACTTMGLVTVICIDVSGGLISKPMEVSRIWMGETEISNKVEGSETDLVVLEVLKQGVGLSILAPELSLSPM SRSLVFWAETAWEMNMKSLTENFDILNHRNLSSDKEGSGVLVRKAGANEQALHLHWSGAASTILEMCSHYYDGEGECCSM ENQKIKFGQVIQEMEESGLKPIAFAHRETQVEELEQDELILIGLIGLKYTCQESTKVALKKLRDTKIKIKLVSGDDIMSV KDIACDLGLGMEEIEGGHVEGKQLQDLHCKARLEKVDQANVMGSFSLEDKLDMVQCLQEKGHVVAFIGRNLSHASVLKVA DVGIVHDSQGRIMHRESSGISIKCFSALKPIVRAGRSKYLNIQKFIQLQLTFNISGLLISFMTTVSTGNSPLTAIQLIWV NVLMCLLGCIMMVMELSSEEQLANPPSNRNQPIITIDIWKNIVIQVFYQAFACMVLEFGGHVSDWEKRVRTTMIFNTFLL CQIFNQLNIMGLLKREILKIVVLQRYFFLFLVGLGGCFLVQVLVIEYAKGLADGMGLNATQWAICILVGALSWVIQWALR NLPDFLRTYCTSASNTPESITQPSWFYFFHLRFSFWSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 176 | 176 | - | – | |
| MobiDBLite | 51 | 86 | 36 | - | – | |
| MobiDBLite | 67 | 86 | 20 | - | – | |
| PANTHER | 68 | 326 | 259 | 0.0 | – | |
| PANTHER | 68 | 326 | 259 | 0.0 | – | |
| SUPERFAMILY | 162 | 1043 | 882 | 6.41E-48 | ||
| Gene3D | 172 | 513 | 342 | 2.7E-11 | – | |
| Phobius | 177 | 194 | 18 | - | – | |
| TMHMM | 177 | 194 | 18 | - | – | |
| Phobius | 195 | 205 | 11 | - | – | |
| TMHMM | 204 | 226 | 23 | - | – | |
| Phobius | 206 | 226 | 21 | - | – | |
| Phobius | 227 | 442 | 216 | - | – | |
| SUPERFAMILY | 246 | 324 | 79 | 6.41E-9 | ||
| PANTHER | 364 | 1050 | 687 | 0.0 | – | |
| PANTHER | 364 | 1050 | 687 | 0.0 | – | |
| TMHMM | 443 | 465 | 23 | - | – | |
| Phobius | 443 | 465 | 23 | - | – | |
| Phobius | 466 | 484 | 19 | - | – | |
| Phobius | 485 | 509 | 25 | - | – | |
| TMHMM | 488 | 510 | 23 | - | – | |
| SUPERFAMILY | 499 | 887 | 389 | 7.46E-17 | ||
| Phobius | 510 | 844 | 335 | - | – | |
| Gene3D | 527 | 682 | 156 | 1.1E-8 | ||
| SUPERFAMILY | 556 | 687 | 132 | 1.16E-10 | ||
| Gene3D | 683 | 824 | 142 | 6.8E-20 | ||
| Gene3D | 825 | 1044 | 220 | 1.2E-32 | – | |
| Phobius | 845 | 865 | 21 | - | – | |
| TMHMM | 845 | 867 | 23 | - | – | |
| Phobius | 866 | 876 | 11 | - | – | |
| Pfam | 870 | 1039 | 170 | 2.8E-25 | ||
| TMHMM | 872 | 894 | 23 | - | – | |
| Phobius | 877 | 897 | 21 | - | – | |
| Phobius | 898 | 917 | 20 | - | – | |
| Phobius | 918 | 941 | 24 | - | – | |
| TMHMM | 919 | 941 | 23 | - | – | |
| Phobius | 942 | 952 | 11 | - | – | |
| TMHMM | 951 | 973 | 23 | - | – | |
| Phobius | 953 | 973 | 21 | - | – | |
| Phobius | 974 | 984 | 11 | - | – | |
| Phobius | 985 | 1007 | 23 | - | – | |
| TMHMM | 986 | 1005 | 20 | - | – | |
| Phobius | 1008 | 1018 | 11 | - | – | |
| Phobius | 1019 | 1039 | 21 | - | – | |
| TMHMM | 1020 | 1039 | 20 | - | – | |
| Phobius | 1040 | 1078 | 39 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
Expression pattern of LotjaGi1g1v0009500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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