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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0047400 |
| Transcript ID | LotjaGi1g1v0047400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxin response factor; TAIR: AT5G37020.1 auxin response factor 8; Swiss-Prot: sp|Q653U3|ARFQ_ORYSJ Auxin response factor 17; TrEMBL-Plants: tr|V7B6L0|V7B6L0_PHAVU Auxin response factor; Found in the gene: LotjaGi1g1v0047400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:6422721..6431442) extracted from Lotus japonicus Gifu genome v1.2.
CTGTATTAAACCACTTATTTAGTTAATTACCATAGCTATGTGTGTTTTTCAAGAAGACTGAAATCTATCACTATCAGCTA TCACCTACAAATTTGGCATGGTTGTCTGAAAAGTGCAGTATCCAACAAAAATCTACAGAGTACACAGCAAGTTACGTATT TTCAAACCATTTTGTACACGAACAAGGTTCAATTATTACCAATCACTGTAACATTGCATTCACACTCTTCTTTTTCTCCA TCTTCTCTCACATCACACACTCTCTCTCTCTCTCTCTTGCACCTTCTTCTCCAATCCACAAAGCATGAAATGAATGCAAC TCTCTCACTTCACTCACCTCTTTCTTGCTCCCACTGATTCCACTGTTCTTGTGAGCTAAGCTTTTCTTTTTCTCTATTAA GATCTGGGAAGTTAGGGTTTTGCATTTGGGGTTGCAGAGAGCTAGATTTGAATGAAAACCACGAGGTTTGGTGGATATTG CATTGCAAACGGTTTTGGATGATGTTGCAGACATAGCTAACGTGTTGTGGGTTGCTTCAAGTTTGAAACTTTGGGGTGGA AGGGTTGGTGGGGTGGGTGCTTGATTCATGGGGTTGGGTTTTTACTAGTTTGGAACTTCATCTGTAGCTGAAAGCATGAA GCTTTCTTCTTCTGGACTTGATCAACAGCTTGAGGAAGAAGGTAGTAACTTGTTTCTTTTGTGCAAAATTGCTTTATATG TTGCTCCTTGGCCCTAACCTTATCTTGTCGTTACCTCTGTTTTTCGGTTGACCTGTTCATTTGTTGGTGCTTGTTCTTTC TGTCTTTGCTTAAACTAGGACTAGTAGGTACTTTTTTCTTCTTCTTGGCATTATACGGCATGAACTGAGGTTTATCAATG TTCTGATGTTTTTGTTTTTATCTGTTTTTTTAGTATCATAGTATGTGTCAAGGGCAACCTTAAATTCGTGTCTGATTTTT TTTCCAACTTCCTATGTATTGGTGCTGATTTTGAGTTTTAGGTGATAAGATCCTATTACTATCTATAAATGCTTATCAGA AAAAAACTATCGATATACAACTCTATGCATGCCTGCTTTGAGTATTTGGAATTTGGTCTATGGATGTTATTTCAACTGAT AAAATATGTAGTTGATTTTATACATTTATTACTGATAGCAATTAGCAACCTGTTGGCTGGATACTGGACTATGGTGTCCT TTTGACTTATCCTCTATGATTACACGGGCAATGCTGGGAATGATTTACTTCATGTATACTGACTCATATTAACCTGTGAT TTGTATAGGGGAGAAGAAATGTTTGAATTCTGAACTTTGGCATGCATGTGCTGGCCCTCTGGTTTCCCTGCCTCCCATTG GAAGCCGTGTAGTCTACTTTCCCCAAGGTCACAGTGAGCAGGTCAGTAATACTACTTGTATCTATAGAAGTTGGATTTAG GGCACATACTTATTTTTAGTTTTATTTTGGCCTTTCATGGAAATTTGGTGAAGCTCTTATGCCCAAGAAAGGGCATAAAA TTATAAAGATTATCAGAACCTCAACAATTATGTAGAGCCACATGATCTTGGTAAGCAGATAGTTGTGCTATTTAGCGGAG TAGACTTTAACTTTTTACTTTCCTTTTTTTGGTATATCTGGACGAAAGCAAGTATGCTTGTGCTGTTGCAAGCTCATAAT CTTAAGATAGCATAGATTTAGTACTTGACCAGATAGGATGAATTCAGTTAGTGGATCAGCAATACTCTGAAAGTATGAAA AGCTGTAAGCTGTAAGTTAATGTTAGCGGGCGTCATTTATTAATCTTTAAGTTGTTATTCCTAGAGGGAGGGAGGCCGTC TAAGACCGAGTCAGAGAGATATTCAAACTGCTATATCGAGCTTTTGATTTCCTGCTTTATGTTGTTGCTGCTGCAGCTCT ACCTCATAAATCATATCCGTAATAACACATGATATTACTTTATGCTTGAAATGAGCAACTCTTTAGTTAAATTTTTATCA GAATTTCGGTTCTAGAACATTGTGAACATTGGTCAGTTTGATGATCAAGGTATAAGTCTCCTCTACAATTATGGATATAG CACTACGGTAAAATTTAGCGCTTTGGGTTTTCTAGTAGAGCAGATGGGGCTCTACCGTGCATCAACTTATGATGATTCCA TTTTCTAATTTTCTTATGGATCAAACCATATGTTCATCTTTTGTAATCTATTGTTGCATTTGAAATTTCCAGAGAGCTTA TTTCTGTTCATATATTTCACTTTTATATGTTTTCAGTTCTTTAACAACTTTGATGTTGATTTTACAGGTTGCTGCTTCAA CTAACAGGGAAGTAGATGCACATATTCCTAATTACCCCAACTTGCCGCCACAGCTTATCTGTCAACTTCACAATGAAACA ATGCATGTAAGAATAATGTTTGCATTAAGTCTACTTCGGAGAATATTTCTATGGTCTTGCATTCTGAACTTATTAAGCAT GCAACTTGCAGGCAGATGCTGAAACAGATGAAGTTTATGCTCAAATGACTCTACAACCTCTAAGTCCAGTACTTACTTTT CTCTTATTTGGTAGTTTATTCTGTACTTTATCATTTTTTGACATGAGTCATTTTGTAGCAAGAGCAAAAGGAGGTGTATC TGCTGCCTGCAGAATTGGGTACTCCAAGCAAACAACCAACCAACTACTTCTGTAAAACATTAACTGCAAGTGATACCAGC ACTCATGGAGGATTTTCTGTTCCTCGAAGAGCAGCTGAAAAAGTCTTCCCTCCTCTTGTAGGTCATATTGGCTTCATGAT TTTATCAGCTATATATGATGTATAATAATTAGTTTGTCAGATCTTGACCTGATTGATATATTTTTCTTTAATTTGTTTCT CAGGATTACTCACAGCAGCCTCCTGCTCAAGAACTAATTGCGAGAGATCTTAATGACAACGAATGGAAATTCAGACATAT ATTCCGAGGTGAGTTTTTCAAGGTTTTTGGAATAAATTATTTGCAGTTAACAGTAATATATTCAGACATATATTCAATCA TATATCCCGACTGATTGTGTGTAATGAAACCAAGGAAAGATTAGCAGTAACTGGCATGATGTGTCATCTGACATAATTTA AATTGCTTAAATTGTTACTTGAATGTTTTTTTTTCTTCTTACTAGTTTTCTATTATCACTTGTAGGTCAGCCTAAAAGGC ATCTTCTGACTACAGGATGGAGTGTCTTTGTCAGTGCTAAAAGGCTTGTTGCCGGTGATTCAGTCCTTTTCATCTGGTAC CTATAATTATGAAATTTCGATGTACTTGACTTGTTAAATATTCAACTCATTTTTCTCTTCTTTCATGTTCATCATCTAAT CTGTTAGATGTATGTGTAGAGAGAGAGAGAGAGAGACAGAGATAGAGAGAGAGAGAGACAGAGAGAGAGAGAGCAACTTA CACTGGTGTAAGATTTCAGCATTCTTGCATCATTGATGGCTTTACATAGAATGTGATTTTTGCTGACTCAAAATTATTCA TTTCCTGGATTAATTGTGTCAAATTTTAACAACCTTAAGTATATTATCAAGTAGTTCTTATATTCATGTTTCAAAGTATA TATGACGTTAGTTTTGTCATATATCAATTACGAAGCAGCTATATATATACATAGACACACACACACACACACACACACAC ACAGGATCCATAAGATTGTAACTTTCAATCCGATGGTGAATTTTAGAATAAAATTATCCGATAAAAAGTTATTGAATGAT GCAAGAGCATTAAAGTCTTATACTGGTGTAAGTGATCCCTCATATGTGTATATAGAAATATGCGTGCGTGTGCGTGTGTG CACATGTATGTATATATGTATGGACATGTTATGCTTCAGTTATGCATGGTTTTAGTTATTGGAGGGCTGGACTAAGAGTA GAAATCATGTTATGGTTTATACATTATGTTAAAATAAGCTGTCATGGGAGCTTCTTGCCCTAATAATTAGGTGTTTTCTT ATTAGCCTGCTTGCCTAGCAAAATCACCAGTAATTACAGATACATTCTGGACCATGGTTGCATGATCAAAATCTATTGAA ATGAATAATAAGATATAATTGTAACAGTTCTCCTGTTTTTATATCAGGAATGAAAAGAATCAACTACTCTTGGGCATTCG ACGAGCAAATCGTTCGCAGACCATTATGCCATCATCGGTTCTGTCAAGTGATAGCATGCACATTGGCCTTCTTGCTGCTG CAGCTCATGCAGCTTCCACAAATAGTCGCTTTACCATATTCTATAATCCTAGGTTTGTAATTCTAGTGGGATGATCTGCA TTATTACACTACAACCCATGCTGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACAGGGC AAGCCCATCTGAATTTGTAATTCCTTTGGCCAAGTACGTTAAAGCGGTGTATCATACACGAGTTTCTGTCGGCATGCGAT TTAGGATGCTCTTTGAAACAGAAGAATCAAGTGTCCGCCGGTTGGTATTACTTGCCTTAGATATTCCCTCATCTAATTAC TAAGAGTCCCTTCCCAAAGAAGAAACATAAGCTCAGTGGCACTAAAATTTCTCATCCCATATATTAAGCATTCAGTTTAT GTTTTTGTTCTATGACTTAGAACGGCAATTGAGTCGGTTAAATTACTTTTCAGGTCCTTATGCTTTTTGGAAAAATAAAA AGGACGCTATAGTTTCAAAATTGTAGTTGGTTCCTCAAAGTGTTTTGTTTTTTTTTCCCCAGTTGGGTTACTGTAATACG CTAAAGGTTGGTTGGGTTCAAGGACCCGATTTCTCTTTTTGCTACTATAGGGACCTAACCCAATGCCAAATTTGAACAAT AGGAACATACTCAATTTTCTCTAAAAGTACAGGGACCTATGGAGTTATTTGACCTTTAATTTTACTTTCTGAATGTTATT TATGTTAATTTAGGATATTCTTTGTATGGTGATGACCTCATAATACTTTGGTTTGTGTGTTCTACATTGTATTCACAAAG AAAGGATTAATGCTACTCACTGAGTACTGCGGTTATCAATCACAATTGCACACAACTGCACATAATTCCGCCACATGTTT AACCGGAGAACTTCATCATTGGCATTTTCTCCATATTGGTTCTCACCATGGTCAGTTTATATTCTAACCATGGTTATTAT TCTAAATAATTTTCTGTGTACCATTTCATATCACTTTGTTGTGCATGTTTGCTTAGTAACTGTGAATATGACTGTTGATG CATTACTTAGGTCCTCCCAAAAGTTGAAGGTTTTTTACAGATGATTAGCCACACATTATTTGCTTATGTCCTTCATAAAG CCCGTGTTTTGTGAGGTTTTTCTTACATTGATGCATTCACTCACTGTAACACATTCTTGTCCAGATACGTGGGTACTATA ACAGGTATTAGTGATTTAGATTCGGTCCGCTGGCCAAACTCACACTGGCGTTCTGTGAAGGTTTGTCAAGACTGGTCGAT TCATCCAACAGCTATATACCTTTGCCATGAGAAATTTAGCACAGTTATAAATATATCTGGGATTCTTTAAATGTAGTTTA GAATTTCGGTTCTTGAACTTTTTGTCTACTGGTGTAGGTTGGCTGGGATGAGTCCACTGCGGGGGAGAGGCAGCCGAGAG TTTCCTTGTGGGAGATTGAACCTTTGACAACATTCCCAATGTATCCATCTTCATTCCCCTTGAGGTTAAGGCGCCCTTGG CTTTCAGGACCACCTTCTTTATATGGTATATGGTGGTTTTGTTAATAAAATGTGTCATGGAATTCTCTGGGATCATTTTG ACTTTTTTTTTTTGCTGTAAGGTACATGATGATATCTTCACCTATGAGTTAAGCTATTTCTTTGCCTTTCATTTTGTGTA ATCAGGTCTCAAGGATGGTGACATGAGCATTAGTTCTCCATTATTGTGGCTCCAAGGTGGGCTTGGGGATCAAGGAATGC AATCATTGAACTTCCAGGGGCTTGGCGTTACGCCATGGGTGCAACCAAGATTGGATGCTTCTACTCCAGGTCTCCATCCA GAGTTATACCAAGCAATGACCTCTGCTGCATTCCAGGAAATGAGGACCATGAATCCTTCAAAATCTTCTTCCCAATCTAT GCAGTTTCAGCAGGCTACAAACGTTCCATCTGATCATGCTTCTCAGGTACAGAGGCCAGTATTATCACAGTCTCAGCCCC AAAACACCTTTGTGCACAATTTTCAAGAAAACCAGGTGCCAACTCAGTCACAACTTCTGCAACAACAGTTGCATCGTTAC CACCCATATAGTGATCAGCGGCAACAGCAGCAACTTAAAAACTTGCCTGTTCAGCAGCAGTTACAAAATGTCATTTCTCC TTTGTCCAATTTGTCATCAGGTACACAGTCTCATTCTCCACCCATGCAAGCCCTAGCTTCACACTGCCAACAGCAAAGCT TTCCCAATCCTATCAGGAACCATATTTCCAGCTCTGATGTTTCCACCTTCCAGAGTCTACTAGGTTCATTCTCTCAGGAC GGAACATCCCAGTTTCTTAATTTGAATGGGTCCAATTCTGTTCCAACTGCTGCTGCTAATTGTGTATTGCCTCAGGTGGT AAACATGGGAACATCACAATCAAATGTTTCTGAGCTTTCTGCTTTGCCCCCATTTCCTGGAAGAGAACATTCTGCATACC AAGGTGCTGCTGATCCTCAGAGCAATCTTCCATTCGGGATTAACGTTGATCCATCATCTCTTATGCTGCAAAATGGCATG CAAAACCTTAGAAATATAGGGAATGTGAATGATTCATTATCATTGCCGTTTTCTGCTTCAAACTGTGATGGTGTTACGGG CACTGATTTCCCCCTTAGTTCAAACATCGCAGCATCAAGCTGTGTGGATGAATCAGGCTTCTTGCAGTCTTCTGAAAATG TAGACCAAGCAAATACACCAACTGGAACCTTTGTTAAGGTAATAGCTAGTTACATTTTTGTTTATAGGTGGTATGCCTTT ATTATGTATTTTTTTTTGTGCAATCTTGTTTTAATATCATTTACCAAAATTAAGCATCACTTTATAAACTATACCATGGG TTCAAGTGTCAAGTTAAATATATTTATATAAGATTTCAATGTTGAATTGGTTCTCTTTTACATGGATATTGGGACTCTTT TTATAAAAGCTCTACATAGTGCTTTTGATGATTTTTTTAATTGAAACTAGTTTTTGTTTGCATTTCATCTTCTTTTGTAG GACAGCTATTTTTCCATTTAGTAAGTGGACACTCTCTAATGTCTAGGACTACTCGTCTAGTTTTATTTGTTGAGTATTCT GATGTATGTTTGACAGGTTCACAAGTCAGGGTCCTTCGGGAGGTCACTGGACATTTCTAAGTTCAGCAGCTATGATGAGC TGCGCAGTGAGCTCGCTCGCATGTTTGGCCTTGAAGGCCAACTGGAGGACCCTATGACTCTGAGATCAGGCTGGCAGCTT GTATTTGTTGACAGGGAGAATGACATTCTTCTTCTTGGTGATGATCCCTGGCAGTAAGTGACCCTATGCCTGTTGTCATT TAAGTTCAAGTTGTAGCATATTATGTTAGTTTTTTTCATTGATTAATGAATTAAGAACTCATTTTTACATAATTTGGATT TTTTACTGATTTCTTTTATAGACTTTTTCATTTTGTGAATCTCAATTATCGTTTCTGCTAAATTTTTTTTCCTATGAAGT TTTTCCTCATTGATGTTGAGTACATGTTTATTGCTGAGAAAACCAGAAAAGATTTACTACTCAGTAACTTGCATGTCATC CTAACTAGTATAAGGCTAAAAGTTTATTGCTGACCAAAAAAGAATAAAGCAAGAAATAACTATGTTTGAATCAACTTCTC TCATATAAGCTTCTCCCCATAATTAATTCTGGCTCCAGAATCTATTATACAACGATTACCAGACTCACTGATTCTTGATT CTGCAAAGAAATATTAACACTTGATTTTCTTGCAGGGAGTTTGTGAACAATGTCTCGTACATCAAGATACTATCTCCACT AGAAGTGCAAGAAATGGGCAGAAGTGTTGCTACTTCTACTTCTTCCCCTGGTCACAAACTTTCTAACAATGGCAACTCTT GTGATGATTATGCGAGTCGACAAGAGTTGAGAAGTTCGAGAAATGGCGTGGCACCAATGGGTTCTTTTCATTACTAGGAC TTTGTGCTTCTAAGTAATTTTAGTTGGACAATTATGGTGGCAGAATCTTTATGACGTTTATGTATGGATTGGCCCAACAT TCTTATACACACATCAATGGTTGACATGGTAGTGATTCTGCAAGGTCTATATAGATCAACAGCAAATGACTGTAAATTTA AATTATAATAGGTTACCTTGTTTCTGTAATGGTTAGTTGCTTATAGCAGTTGTTAATTAGTGTCTAGCTTTGAGTTCTTG CAACTGAAAATGGGGAGCTTCTGTGTAGTTCCATTTGTCTTGTATACTATTACTCACCAAGATTTATATGCATCATAAGT AACAGATATTGTACTGGGCCATTGGCAACTTTTTCTGAAGTGAGGAGTCATATATAAAGATAAAAAGAAGCGAAATTTAT AATGAAATGTTTTTGATGAACAACTAATTGCAATATATTATACACAAAGAACATTAAAAGTGATTTCTTTTTTGGTTAGC CA
CDS sequence (LotjaGi1g1v0047400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTTTCTTCTTCTGGACTTGATCAACAGCTTGAGGAAGAAGGGGAGAAGAAATGTTTGAATTCTGAACTTTGGCA TGCATGTGCTGGCCCTCTGGTTTCCCTGCCTCCCATTGGAAGCCGTGTAGTCTACTTTCCCCAAGGTCACAGTGAGCAGG TTGCTGCTTCAACTAACAGGGAAGTAGATGCACATATTCCTAATTACCCCAACTTGCCGCCACAGCTTATCTGTCAACTT CACAATGAAACAATGCATGCAGATGCTGAAACAGATGAAGTTTATGCTCAAATGACTCTACAACCTCTAAGTCCACAAGA GCAAAAGGAGGTGTATCTGCTGCCTGCAGAATTGGGTACTCCAAGCAAACAACCAACCAACTACTTCTGTAAAACATTAA CTGCAAGTGATACCAGCACTCATGGAGGATTTTCTGTTCCTCGAAGAGCAGCTGAAAAAGTCTTCCCTCCTCTTGATTAC TCACAGCAGCCTCCTGCTCAAGAACTAATTGCGAGAGATCTTAATGACAACGAATGGAAATTCAGACATATATTCCGAGG TCAGCCTAAAAGGCATCTTCTGACTACAGGATGGAGTGTCTTTGTCAGTGCTAAAAGGCTTGTTGCCGGTGATTCAGTCC TTTTCATCTGGAATGAAAAGAATCAACTACTCTTGGGCATTCGACGAGCAAATCGTTCGCAGACCATTATGCCATCATCG GTTCTGTCAAGTGATAGCATGCACATTGGCCTTCTTGCTGCTGCAGCTCATGCAGCTTCCACAAATAGTCGCTTTACCAT ATTCTATAATCCTAGGGCAAGCCCATCTGAATTTGTAATTCCTTTGGCCAAGTACGTTAAAGCGGTGTATCATACACGAG TTTCTGTCGGCATGCGATTTAGGATGCTCTTTGAAACAGAAGAATCAAGTGTCCGCCGATACGTGGGTACTATAACAGGT ATTAGTGATTTAGATTCGGTCCGCTGGCCAAACTCACACTGGCGTTCTGTGAAGGTTGGCTGGGATGAGTCCACTGCGGG GGAGAGGCAGCCGAGAGTTTCCTTGTGGGAGATTGAACCTTTGACAACATTCCCAATGTATCCATCTTCATTCCCCTTGA GGTTAAGGCGCCCTTGGCTTTCAGGACCACCTTCTTTATATGGTCTCAAGGATGGTGACATGAGCATTAGTTCTCCATTA TTGTGGCTCCAAGGTGGGCTTGGGGATCAAGGAATGCAATCATTGAACTTCCAGGGGCTTGGCGTTACGCCATGGGTGCA ACCAAGATTGGATGCTTCTACTCCAGGTCTCCATCCAGAGTTATACCAAGCAATGACCTCTGCTGCATTCCAGGAAATGA GGACCATGAATCCTTCAAAATCTTCTTCCCAATCTATGCAGTTTCAGCAGGCTACAAACGTTCCATCTGATCATGCTTCT CAGGTACAGAGGCCAGTATTATCACAGTCTCAGCCCCAAAACACCTTTGTGCACAATTTTCAAGAAAACCAGGTGCCAAC TCAGTCACAACTTCTGCAACAACAGTTGCATCGTTACCACCCATATAGTGATCAGCGGCAACAGCAGCAACTTAAAAACT TGCCTGTTCAGCAGCAGTTACAAAATGTCATTTCTCCTTTGTCCAATTTGTCATCAGGTACACAGTCTCATTCTCCACCC ATGCAAGCCCTAGCTTCACACTGCCAACAGCAAAGCTTTCCCAATCCTATCAGGAACCATATTTCCAGCTCTGATGTTTC CACCTTCCAGAGTCTACTAGGTTCATTCTCTCAGGACGGAACATCCCAGTTTCTTAATTTGAATGGGTCCAATTCTGTTC CAACTGCTGCTGCTAATTGTGTATTGCCTCAGGTGGTAAACATGGGAACATCACAATCAAATGTTTCTGAGCTTTCTGCT TTGCCCCCATTTCCTGGAAGAGAACATTCTGCATACCAAGGTGCTGCTGATCCTCAGAGCAATCTTCCATTCGGGATTAA CGTTGATCCATCATCTCTTATGCTGCAAAATGGCATGCAAAACCTTAGAAATATAGGGAATGTGAATGATTCATTATCAT TGCCGTTTTCTGCTTCAAACTGTGATGGTGTTACGGGCACTGATTTCCCCCTTAGTTCAAACATCGCAGCATCAAGCTGT GTGGATGAATCAGGCTTCTTGCAGTCTTCTGAAAATGTAGACCAAGCAAATACACCAACTGGAACCTTTGTTAAGGTTCA CAAGTCAGGGTCCTTCGGGAGGTCACTGGACATTTCTAAGTTCAGCAGCTATGATGAGCTGCGCAGTGAGCTCGCTCGCA TGTTTGGCCTTGAAGGCCAACTGGAGGACCCTATGACTCTGAGATCAGGCTGGCAGCTTGTATTTGTTGACAGGGAGAAT GACATTCTTCTTCTTGGTGATGATCCCTGGCAGGAGTTTGTGAACAATGTCTCGTACATCAAGATACTATCTCCACTAGA AGTGCAAGAAATGGGCAGAAGTGTTGCTACTTCTACTTCTTCCCCTGGTCACAAACTTTCTAACAATGGCAACTCTTGTG ATGATTATGCGAGTCGACAAGAGTTGAGAAGTTCGAGAAATGGCGTGGCACCAATGGGTTCTTTTCATTACTAG
Protein sequence (LotjaGi1g1v0047400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLSSSGLDQQLEEEGEKKCLNSELWHACAGPLVSLPPIGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL HNETMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDY SQQPPAQELIARDLNDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRSQTIMPSS VLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYVGTITG ISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLRRPWLSGPPSLYGLKDGDMSISSPL LWLQGGLGDQGMQSLNFQGLGVTPWVQPRLDASTPGLHPELYQAMTSAAFQEMRTMNPSKSSSQSMQFQQATNVPSDHAS QVQRPVLSQSQPQNTFVHNFQENQVPTQSQLLQQQLHRYHPYSDQRQQQQLKNLPVQQQLQNVISPLSNLSSGTQSHSPP MQALASHCQQQSFPNPIRNHISSSDVSTFQSLLGSFSQDGTSQFLNLNGSNSVPTAAANCVLPQVVNMGTSQSNVSELSA LPPFPGREHSAYQGAADPQSNLPFGINVDPSSLMLQNGMQNLRNIGNVNDSLSLPFSASNCDGVTGTDFPLSSNIAASSC VDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPMTLRSGWQLVFVDREN DILLLGDDPWQEFVNNVSYIKILSPLEVQEMGRSVATSTSSPGHKLSNNGNSCDDYASRQELRSSRNGVAPMGSFHY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 852 | 852 | 0.0 | – | |
| PANTHER | 1 | 852 | 852 | 0.0 | – | |
| SUPERFAMILY | 114 | 258 | 145 | 2.49E-48 | ||
| Gene3D | 126 | 231 | 106 | 2.6E-42 | ||
| CDD | 128 | 229 | 102 | 1.58592E-22 | ||
| ProSiteProfiles | 129 | 231 | 103 | 12.548 | ||
| Pfam | 129 | 230 | 102 | 9.6E-22 | ||
| SMART | 129 | 231 | 103 | 3.9E-24 | ||
| Pfam | 255 | 338 | 84 | 1.5E-33 | ||
| Gene3D | 293 | 366 | 74 | 3.6E-32 | – | |
| MobiDBLite | 454 | 489 | 36 | - | – | |
| Pfam | 730 | 825 | 96 | 1.3E-8 | ||
| SUPERFAMILY | 734 | 818 | 85 | 7.85E-8 | – | |
| Gene3D | 737 | 832 | 96 | 1.6E-33 | – | |
| ProSiteProfiles | 741 | 827 | 87 | 23.473 | ||
| MobiDBLite | 834 | 864 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Response to hormone | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus. |
Expression pattern of LotjaGi1g1v0047400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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