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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0101700 |
| Transcript ID | LotjaGi1g1v0101700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxin response factor; TAIR: AT5G37020.1 auxin response factor 8; Swiss-Prot: sp|Q9FGV1|ARFH_ARATH Auxin response factor 8; TrEMBL-Plants: tr|I1JHQ8|I1JHQ8_SOYBN Auxin response factor; Found in the gene: LotjaGi1g1v0101700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:15496011..15506219) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTTCACTGTGCATTTCAAACCTCACTCGGGTCTCAATCTGATAGTGATAGGCCACAAAAGAGGTCCCTTTACTTCAA CACACTCACTTGTGTTGTGTTGTGCTTCCTGCTTCATTCATCATCATCATCATCATCATCATCATCATATGCTTTCATAT TCTTCTTCCCTCTTCTGTTCCTTTCAATGGCGATCTTGAACAACGTGACACCCTTGTTGTTTTTGGTCTTGGTTTTGTTT TTTCAGCTTGGTTTCAGCTGGTTTTCGCTTCTGGGTCATCAGGGTCATGGGTTTGCTTGATAAAAGTCCCTGCTTTTTCT GTTTCTGCTGCAACTTGTTCTTCTCAGCTTGTTCTCATTCCACCAACCCTTTTTGGTGGGCAGGGTTGCTTTTTGTTTCT GGGTTCTTCTGCTTTTTTGCTGTGGTGGGGTTCTGACTTCTGAGTTTTTCTTCATCATGCTGTGCTTCATGGATCCATCC TCATGGTTCTGGATTCTGTTTGATTTTTGAGGTTGGGTGGTTTGGTTTGTGGGCATGGAGGGTAATGGCAATTGGGAGGG AGGTGTAGGGGAGTGTAATAATGGTTTTGAGCAAATTGAGTATGGGGGTTCTGAGTTAGGGTTCCATGTGTTTGTGTGAT TGCTTAGTGCTTTGTCTTCAAAAGGAGGAAAAAGGGGTATGAAGCTCTCAACATCAGGGATGGGTCAGCAGGGACATGAA GGTATCCATTATCCATTCCATTTTTTCTTTATTCCATTTTTTTTTCTAACTATTAAAAAAAATTGGCACCCTATTCTGAG CTCTTGGCTGGGGTGGGTTTCAAGTTTCATTTATCTAAATAAATAGTATGTGTCCCTTTCATAGTTCCTTTTGTGTTTTG CTTCAAAGTCCTAGCGAGTGTTCTTTCCCTTTTGTTGTTTTTACTTTCTATATACTTTCTATATTTTTTTGAGATAATTT GATATGTGTTTGATGGTAGGAGGGGAGAAGAAGTGTTTGAATTCTGAGCTATGGCATGCATGCGCGGGTCCCTTGGTGTC CCTACCAACTGCAGGAACTCGTGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGGTGCTTTTTGACATGCCCCTACTCT ATTGCTGGTTGTTTCAATTTATAGCATGTTTGGATCAGCTTTCATTAATCAAAATCAATTCTGAAACCGAAAGGCTACTC ACTGAATCTTCTTCCCAGAATTGATTCTGACTTCATAATCAATAATAGAAGAGTTTCCTTTTGCATGCTATGTAGGATGC ATAACTTTTCTTGCAGATTTGGGATTGGAAGCAATTCAATATAGTTAGTTACATGTGGTAGATTTTTTATTGGAAATTGA ACTGAATATGTATTGAACAATGATTCTAGGTTTCTGCCACAACTAACAGAGAAATTGATGGACACATACCCAATTACCCG AGCTTGCCACCTCAGCTGATTTGCCAACTTCACAATCTTACGATGCATGTGGGTATTATATCATTCATGTAGTTATGATA GTTGAGTTACTTATACCTCCCATTGGAGTAGACTCAGTTAACCTGAGCATATATTAATTTTCAGGCAGATGCTGAAACAG ATGAAGTCTATGCTCAAATGACACTTCAGCCGCTGACTCCGGTATCCCTTTGTTCTTTGGAAGCTTGGTTTGTTTGCATT GCATGTGTTTCTTGTTTCTGGAGTTGAAAATGTGTTTGTGATTGTGCTTGTAGCAAGAGCAGAAAGATACGTTCCTTCCT ATGGAATTGGGTATTCCAAGTAAGCAGCCCTCAAATTATTTTTGCAAGACATTAACGGCAAGTGACACCAGCACACATGG AGGGTTCTCTGTTCCTCGACGCGCAGCTGAGAAAGTTTTCCCTCCACTGGTAATGTCCACGTTTTCTTTGGTGTTTCATT CTGGTTTGATATAGATATAGTTCTCTTCTATTTGGGTTGTACAGGATTTCTCACAGCAACCACCTGCACAAGAACTAATT GCTAGGGATCTCCATGATGTTGAGTGGAAGTTTCGACATATCTTTCGGGGTAAGATTCACTCACTTGATTCCGTTCCTAT TATCTTGTTATTTTACAAGTTGAGTTTTATTATGTTGAATAGGATTATGATTAGATTACTTTTCTTTAGAGTATGACGGT CTGCTATGCAATACTTTCACTATGTGCAGACTTTCCCTTGACACTTCATGTAACAAAAAAAACTACCTTTATGTAAAGAT TGATATCTCTGTTGCATGCTAATGTAGTAGTTAACAGGGATGGAACATACTTGTGGCATTAGGTTAGATAACTCTTGTGG CATCATGGTTCTTTTTCCTGTCTCTATAGTTACTCTTAATCAGTAGTTAAATAATTTGATTTCATGTTTTGCATTTTTTT CAACTTTTAAACATCTCTTAGATTTGAACATGTGTTTCTCCCTGGGAAACCCCAATTCATCGGTTCTTCAACTTCAAGTT GAGAGACTTACTGTTTGATTTATGGGTGACTTTGAGTGGTTTGTGGCTTTCCTGTGGGTGATAGTTGCATTTCTAAAGTA GAAATGCAGACAGCCTTGGAGCCTGACACCTATGAATTCTCCACGCTTCAAGCCCAAATGGGCTCTTGCGTGAGGGGACG TGTTAGAAATAAAATATAAAATCATTCATGTGGTCCTTACCCATTAGCTTGAGCCTTTGGGATAACTGGTTCTTGACAAC TTGCGACTTTCATATGCATTTATATTGAAGTTTCATCAGATGATAGTCAGTGATTGATGTTATTTTGCTTATGTATGTCA TTTTATATGCATGTACTTATTTGAATGTTTTTATATTTTAGGTAGGGTCTTATATACAGCTTGTATTTTATGTGTCTAAC CCTCTAGGTAGAATCTTGATCTTGACTACCTTGATCCCTTTCTTAAAGATTAAGATTTTCGATTGTAAAGTGGGGTTGCT AGAATCTTTAGGAAGAAAACCAAGGCACCTTATTATTCACTTTTGTCTGGCATATCTTTAACAATTTAAAGATCTGGGAA ACCTTACTTTTTGGTCTATGCATCAGATATGTGTAGGTGTATAGCTTAGTACTTGTTTGCAATTTTCTTCTGTAGCTTTT ATGAACTTTGTGTATGTGTATTGCAAATCCATTTGCTAAAAAATTTCTTGTATCTCAAGTTATCAGGCAACTCATTATTA GCTAATCTTAAGATCCTGACCATTTAGTGTTGTCTTATGTTATATCAAATGTCAAATCTCAACTCAATTGTTGTGAACTG TTCAGAAGTCCCACATTAACCAGAGGTATGACCAAGATATCCCTTATATATGGGAAGACAATCCTCACCTCTAGAGCTAG CTTTTGGGGTAGAGTTAGTCCTCCCAAATTCTAATATATGCATTGAAGTGATCTGTTGAGGGTACATGATCCCCTGAGAA TCATGAATAATGCAAAGTGATCTGAACATGGACGACTATAAACATTTGCGGGTGGTCTCCACTTAATGGATAGGCTGTGA TACCATATTAAAATTTGGAAGACATAACCTTACCCTCAAAAGCTAGCACTAGAGGTGAGGATTGCCTTCCCATATATAAG AGATATCTTGGTTATATCTTAGTCAACGTGGGACTTCTCAACAACTACTTTATTGAAGAAGCTGTTAACAACTTCAGAAT TATTTAAATCTGAATTTTATCCAGTAGGAAATGAAACCTTTCTTTTAGGGAAGTCTATCTTTGGTTGTATTTTAAGGGAT TGATTCAAATCCTTATGGAGTAAAAATCTGTCCATACACTAAACATACCAAGATAATTTATAGTTTTTGGCTTTGCTCCT TCTTGGCTAACCTTACATTGCCAAATAATCTTTCAATGTGAGGCCAAAAGAATGAGTTTCCTCTGCAAAAGCTGCATTAT ATTTCACAAAATGTCCAGCAAGCTTCTAAGTCATACAATAGAATCACAGATAGATTTTTTTGCTAACACATTGCCATGAC AAATACATCCAATTATCTGCTGAATTTTACATTGGTACAGCTGCATATACTGTTACTTAAAACTTGAAAACTAGACATTT AACACGCATGTCAGCAAGCTAAAATTATCTTTTTAAAAGGAGAATCTGCTTCTGAAAAGGATGTTCTGTAGTTAGTTCTT TGTTGTTCAGTGGGCCAATAAGATGTTAACTTCTCTCTGCCATTTATCTTACAATATTTTGCACCGTGTAATTTGTAAGA TCTAAGAAAAGAGATGGGATATCTGATGTAATAACTAATAAGTACTTACTTTCAAATGTTCCTTTTGGTTTCCTACTTCA CTTCTAATATACTTTAGTGTATTTACTCTTTTTTTTCCTGGGTCTTATGTCTGTTTCCATAAAGCAAAAGCATCAAACAC TTGGTGCATTTATAGAAATTAGAGCTGATGCGCCCGAGTCATTGTAAATCAACTCTATTTGAGATTGTTAACTTGGTTGT AGAACACACAACATGTTATGTCTATTACTTCCTTGTCATTTCAGGACAACCGAAACGACACCTTCTTACAACAGGCTGGA GTGTGTTTGTTAGTGCCAAAAGACTTGTGGCTGGTGATTCTGTGCTTTTCATTTGGTATTTGTTTCCTTTTATATGTTTT GGCTAACTTTTCTTACTCTTCATTACTGCAAACTGCTTGTTTAACCTTTTTATATGTATATTTTATGTTAGGAATGAAAA GAATCAGCTTCTTTTGGGAATACGTCGTGCCAATAGGCCACAAACTGTTATGCCATCTTCAGTTCTATCCAGTGATAGTA TGCACATTGGGCTTCTTGCTGCTGCTGCCCATGCTGCGGCTACTAATAGCTGTTTTACAGTGTTCTATAATCCAAGGTTG GGTTTGTTATCTCAATTACCACTTCCAATACTTATTTATGTGAAAGTATCATGCTTTTTTGACACTTGCATCATGGGCAG GGCTAGTCCATCTGAGTTTGTCATACCACTTGCGAAATATATCAAAGCTGTGTACCACACACGCGTTTCTGTTGGTATGC GTTTCAGAATGCTTTTTGAGACTGAAGAATCAAGTGTCCGCAGGTACATTGTAGCTATAATTACTTTTTATGAAGCATAT GTTGATTTTTTTAATTGTAGACTTTTACTGAACTTCTCAGACCAGCCAACATTATACACTGCAAGGGTAATCTTAGTTTA TATTTATAAATGTGTATGACAGAAGCTGGACTTTTTAAAATAACTTATCGATAATAAGGTTGGTGATAAGATAGTGCATC TGCATCTATACTTTCTTAGTAGGCAAGATTATTAATAACTGGAATTATGGTTGTAAAATAGATCTACCAGGCCCCAGGGT AATTTGAAATGGATCAATTGCTTATTTTATATCTGCTTTTAAATTTGGGCTTTTAGAGAGGAAAAAAAAGGTTAGCAGCT GCTAGCTGAAGGTAGTGGAAACCAACTGCTAAGTGCTGTTGTCGGGGGTAGTCTGGTACTATACTTTTTCCTGTGCTTAC ATGTTTTGATTTCTAAGCCCCTCCCTGTCTCACAACCCCAAAAAACTTGGCCGTGGAAATTTAGGAAGGGATATTATTCT TGGGTAGTATGGCACCATACTTTTATGTCTTATGCTGAAGTCACCTTTATTTTGCAGGTACATGGGTACAATAACTGGGA TAAGTGACCTGGATCCTGTTCGTTGGCCGAATTCTCATTGGCGATCTGTTAAGGTAAGTAATCTTGAATACATAAGATTA TGTAGCTGTGTTTATATAAAAATGACTCTTTGCAATTATAATTTATAAACATTAGACTATAAGTATGGAACCTTAGTACA GTGGTAAGATTGTTTGGGTCAATGAGTTCTTGTTGTGAAGTAGCCTCTATAGCACTCCACTCACAGGAGAAAAATGAATA TGTCTAAATCTCCCCGAATGCCCTAACGCGTCAGTGGTTGGAACCTTATGTTCTTGGCTGCAACTATACACCTGTTCTGT TGATTGTGTGTATGGAGGAAGAATATTCTCAAAGTTGTAACTTGTAACCATATTTGATAGGTTAACTTTTCAATACCACT CTAAATTTATAATCCTGTATTATATAGTTTAATCTGTATTATTCACCAAAAAAAAGTTCATTTCTGTACTCTGTTGTCCC ATCCATGAGGATTGTTGCAATGTGTTTGGAGTACTACCTGCATCTTTTCTCTGGTCTTGGCCTTCTGATTAACTAATTTT TGTTAGCATAACCTGTGATTCAGCAGTGAATAATATTCAAATTTGATTTCTGTGTTGTCCCCCATGCCTGAAAAGCTCTC AAATCTGCAACTTTTACAATCTGATACCAGAGCTTATTATTCTTATGCAGCTTTTGTTTCGCCTGCCATATTATTAATGA TGTCTACATAAACAAAAGATAATAGGTGTGATCACTATACTATATTCCGTGTGATTGTGTTGAGAGATAGTGACAGTCTG ATAGGGTTTTTAATAGGTTCAGGGTTTCATAGTTTCTATTCCATACCTTACAAAAGGTCTTGTCAAATTTCATTCAATTT GAAACGAGCTCTTAACCTGGCATCTGTGACATCTTTTACTTTTTCTTTACCTTGTTTCATCCATTGTGCATAGGTTGGTT GGGATGAATCAACGGCAGGAGAAAGACAGCCACGGGTATCATTATGGGAAATTGAGCCTTTAACAACATTTCCAATGTAT CCATCACTATTCCCCCTCAGATTGAAGCGACCATGGTATCCTGGCTCTTCCTCTTTTAATGGTACATGTTTCTCAGTACT TCTATTTCATCTGCTTATCTTCCTTCTAATTAGATCTACATTGTATAATCAGTGCTAAGCATAGTAGTCAATAGCATTGT ATAGTGCCGCTATAGCGGCGTAGCGGAACGGCTCCCTGCCTCTATTGAAATGAAATAACGGCACACTAGCGGCGCGAATA GCGGCAGATCAGGGCCAATAGCGGGAAATAGCGGCGCTATATGGACGAAGGGAAAAATGACTCAAGCCCCTCGGTTTTAA ATCGTTGGGGAACCTTTTTAGGACTTCTCAGGGCCATTTTAGGTCAAACTTGATCGAATGGAGCTTCATTCTTCATTCAG ATTTGCAAATCCGACTTCTTTACCTTGCTTTTGAGTGGTTTTTAGTTATGTGTTATTGTTCAAGACTTGTGATTTTTATT TCTATAATGAATGTTATGAATTTTAGGCAATATTTGACATTTATATGCATATAGTAATAAACTATTAATTATATAAAAAA ATCTGATTAACCGCCATCCTGCTATCCCACTTTTGGGGCCGGCCGCTACGCGCCGCTATCCGGGATTGACTACTTGGGTG CTAAGACTGATGGCACTAATGGTATGATTGGATGAAAGGATATAAAATTTTCATTTTTGAATTGAAGACAATTGTTGACA AAACTCTGCAATTTGGTTTTCATATTTATAGTTCTCCCTTGCCTTTTTTTCCCTTCATCCAGAAAAGGAAAATTTCAGAT TTTCTAATATTCCTCCTGTCCCCTGTTCTTTCTCACCATCCATTAATTTTTAACAATTGTTAAAATTGAATATTGAACAC TTAAATTATGTTTTTCAGCAATGTTCATAATGAAATTTAAGCTTGCCACATGAGGTTTTCTATAGTTCATAATTCACCCA TTTGTCATGTCCAAAAAAAACAAGGTGATTTTGTTTCCTTGTGTTCATTCACATTTGATTGCCCCATGATCTCCTATCTC ATTATGATAAGCAGCTGTAGTACACTTCTTTTGTCTCCTTTATTTACAATGGATCTTGCTACAGATGGCAGAGACGAAGC AACTAATGGGCTCATGTGGCTGAGAGGTGGACCTGGTGACCAAGGCCTCAATTCCCTGAATTTTCAAGGTGCTGGTTTGT TGCCCTGGATGCAGCAGAGACTTGATCCATCCTTGCTTGGAAATGATCATAATCAGCAATACCAAGCAATGTTGGCAGCG GGTTTGCAGAATATGGGGAGTGGAGATCTCTTGAGGCAGCAAATGTTGAATTTTCAACAACCTCTCAATTATCTTCAACA ATCAGGAAACCCCAATTCTCCTTTTCAGCTTCAGCAACAGCAAGCAATGCAGCAATCTGCATCTTCTAATATCATGCAGC CACAAGGTCCAGTATTGGCAGAGAACCTGTCTCAGCACCTCCTTCAGAAATCACACAACAATCGAGAAGACCAAACACAG CAGCAGCAACAAACTTACCAAGATTCACTTTTGATTCAAAGTGATCAACTCCATCTGAGGCAACACACTAGTTTGCCTTC ACCATCATATTCAAAACCAGATTTCATAGATTCAAGTGGAAAGTTTGCTGCTTCAGTTTCGCCAGGACAGTCCATGCTTA GTTCACTTTGTTCGGAAGGGAGTGGCAATCTCTCGAACTTATCAAGAAGTGGTCAGTCCATGCCAACTGAACAGTTACCT CAACAATCATGGGCCCCGAAGTATGCACCTTTGCAGGTCAATGCCTTTGGCAACTCAATGTCACACGGGCAGTATTCTGG AAAAGATACTGCAATGGTGTCACCACATATTAACTCAGACACCCAAAATCCTATTCTATTTGGTGTCAATATCGACTCAT CTGGCCTTCTGCTCCCTACCACTGTCCCTCGTTATACTACTGCATCAGCAAATACTGATGCATCGACAATGCCGTTAGGG GAGTCTGGATTCCAGGGTCCTTTGTATCCTTGCATGCAAGATTCATTAGAGTTGTTGCAAAGTGCAGGGCAAGTTGACCC TCAAAACCAGACACGGACATTTGTCAAGGTATGAGTCTGCATATTTGTCTTAGCTGCTGCTTTATGAGTCCATTTATTTC ATATGATGGTTTAATTTTGTCTTTTCACACAGGTATACAAATCAGGTTCGGTTGGGCGCTCTCTTGACATCTCGCGGTTC AGCAGCTATCATGAGCTGCGAGAGGAGTTGGCTCAGATGTTTGGAATTGAGGGTAAATTAGAAGACCCTAGATCAGGCTG GCAGCTTGTGTTCGTCGACAGGGAGAATGATGTTCTTCTCCTTGGAGACGATCCGTGGGAGTAAGTACAACTTTGAATTA AGTATACTGGTTTAGTGATAGATTTGAAAAAAAAATTGGATTTCAGTGTTCAAAATTGATTTTGGTGAAGTCAATTTTGC AGAATCAAAATTACATTCACGGGAATTAATTTTAAGAGAAGTGATTCTTTTTAGCTTTTCTCTTAAGAAGAAAGGATTCT TGGTGCAGGACTCACAACACGACTATCTTTGCACCTCAAAAGTAATTTTATCACATTCAACAAAATCCGTTCTTCTTAAC TTACTTTTAAAATATTATTCCCAAACATAAATCAATTCTTTCAAATCAGTTCTACCAAATTTAAAACACACGAACCCGTA GAGTATTATCTTGAGTTTGTCTGATGATATAGATACTTATTTTCTATCTCCAGTCTTCAAAACAAGTACAGCATGCTGTA AATGTGTTATTTCACTTGGCTAAAGTTTGTTAACATTGTTTTTTGGTCTGTTGATTACACATTGTAGATCATTCGTCAAT AACGTTTGGTACATCAAAATACTCTCACCTGAAGATATTCAGAAAATGGGAGAACAAGCCGAAGAAACCCTTGGTCCAAG TTCTGGCCAAAGGATGAGTAGCACTGGTGCAGAATCTCATGACATGGTTTCTGGACTAGGCTCACTTGAGTACTGAGATA ATTTCAAAATGTACTCCTTCTGATCCCACGTTGAAGACGATGACTACTACTACTACTACATGTTTGTTACTTCTGTTTGA AACACTAGCATATCTGAACATAATTCTGTATTGTTCTATTCCCACTTTCACCATCATTATTATGTGTACTAGGAAAAAGA ATATGATGACAAACTTAGGACAACCTTGTGTGCCAATTTGTAAACTTTATGTACTGAAAAAGTTAGAAATACAGTGTTAC TGCTATTTGTAGAATTTGATTAACCTCTTGCATGAACTGTACAGTAGGAAGAAAACCTAGACTTTTTCATCCTATGTGTA GTTTTAGAAATAATCTAACATGTTAGCTACTTGTAATTTCTGCTTTAATTGCGAAGGTTATGTGTGACAATACCACAAGT TAGTTAAAAATTTGGAAGTTAGCATCTAGCTAAAAATGGTTAAGTTGGG
CDS sequence (LotjaGi1g1v0101700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTCTCAACATCAGGGATGGGTCAGCAGGGACATGAAGGAGGGGAGAAGAAGTGTTTGAATTCTGAGCTATGGCA TGCATGCGCGGGTCCCTTGGTGTCCCTACCAACTGCAGGAACTCGTGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGG TTTCTGCCACAACTAACAGAGAAATTGATGGACACATACCCAATTACCCGAGCTTGCCACCTCAGCTGATTTGCCAACTT CACAATCTTACGATGCATGCAGATGCTGAAACAGATGAAGTCTATGCTCAAATGACACTTCAGCCGCTGACTCCGCAAGA GCAGAAAGATACGTTCCTTCCTATGGAATTGGGTATTCCAAGTAAGCAGCCCTCAAATTATTTTTGCAAGACATTAACGG CAAGTGACACCAGCACACATGGAGGGTTCTCTGTTCCTCGACGCGCAGCTGAGAAAGTTTTCCCTCCACTGGATTTCTCA CAGCAACCACCTGCACAAGAACTAATTGCTAGGGATCTCCATGATGTTGAGTGGAAGTTTCGACATATCTTTCGGGGACA ACCGAAACGACACCTTCTTACAACAGGCTGGAGTGTGTTTGTTAGTGCCAAAAGACTTGTGGCTGGTGATTCTGTGCTTT TCATTTGGAATGAAAAGAATCAGCTTCTTTTGGGAATACGTCGTGCCAATAGGCCACAAACTGTTATGCCATCTTCAGTT CTATCCAGTGATAGTATGCACATTGGGCTTCTTGCTGCTGCTGCCCATGCTGCGGCTACTAATAGCTGTTTTACAGTGTT CTATAATCCAAGGGCTAGTCCATCTGAGTTTGTCATACCACTTGCGAAATATATCAAAGCTGTGTACCACACACGCGTTT CTGTTGGTATGCGTTTCAGAATGCTTTTTGAGACTGAAGAATCAAGTGTCCGCAGGTACATGGGTACAATAACTGGGATA AGTGACCTGGATCCTGTTCGTTGGCCGAATTCTCATTGGCGATCTGTTAAGGTTGGTTGGGATGAATCAACGGCAGGAGA AAGACAGCCACGGGTATCATTATGGGAAATTGAGCCTTTAACAACATTTCCAATGTATCCATCACTATTCCCCCTCAGAT TGAAGCGACCATGGTATCCTGGCTCTTCCTCTTTTAATGATGGCAGAGACGAAGCAACTAATGGGCTCATGTGGCTGAGA GGTGGACCTGGTGACCAAGGCCTCAATTCCCTGAATTTTCAAGGTGCTGGTTTGTTGCCCTGGATGCAGCAGAGACTTGA TCCATCCTTGCTTGGAAATGATCATAATCAGCAATACCAAGCAATGTTGGCAGCGGGTTTGCAGAATATGGGGAGTGGAG ATCTCTTGAGGCAGCAAATGTTGAATTTTCAACAACCTCTCAATTATCTTCAACAATCAGGAAACCCCAATTCTCCTTTT CAGCTTCAGCAACAGCAAGCAATGCAGCAATCTGCATCTTCTAATATCATGCAGCCACAAGGTCCAGTATTGGCAGAGAA CCTGTCTCAGCACCTCCTTCAGAAATCACACAACAATCGAGAAGACCAAACACAGCAGCAGCAACAAACTTACCAAGATT CACTTTTGATTCAAAGTGATCAACTCCATCTGAGGCAACACACTAGTTTGCCTTCACCATCATATTCAAAACCAGATTTC ATAGATTCAAGTGGAAAGTTTGCTGCTTCAGTTTCGCCAGGACAGTCCATGCTTAGTTCACTTTGTTCGGAAGGGAGTGG CAATCTCTCGAACTTATCAAGAAGTGGTCAGTCCATGCCAACTGAACAGTTACCTCAACAATCATGGGCCCCGAAGTATG CACCTTTGCAGGTCAATGCCTTTGGCAACTCAATGTCACACGGGCAGTATTCTGGAAAAGATACTGCAATGGTGTCACCA CATATTAACTCAGACACCCAAAATCCTATTCTATTTGGTGTCAATATCGACTCATCTGGCCTTCTGCTCCCTACCACTGT CCCTCGTTATACTACTGCATCAGCAAATACTGATGCATCGACAATGCCGTTAGGGGAGTCTGGATTCCAGGGTCCTTTGT ATCCTTGCATGCAAGATTCATTAGAGTTGTTGCAAAGTGCAGGGCAAGTTGACCCTCAAAACCAGACACGGACATTTGTC AAGGTATACAAATCAGGTTCGGTTGGGCGCTCTCTTGACATCTCGCGGTTCAGCAGCTATCATGAGCTGCGAGAGGAGTT GGCTCAGATGTTTGGAATTGAGGGTAAATTAGAAGACCCTAGATCAGGCTGGCAGCTTGTGTTCGTCGACAGGGAGAATG ATGTTCTTCTCCTTGGAGACGATCCGTGGGAATCATTCGTCAATAACGTTTGGTACATCAAAATACTCTCACCTGAAGAT ATTCAGAAAATGGGAGAACAAGCCGAAGAAACCCTTGGTCCAAGTTCTGGCCAAAGGATGAGTAGCACTGGTGCAGAATC TCATGACATGGTTTCTGGACTAGGCTCACTTGAGTACTGA
Protein sequence (LotjaGi1g1v0101700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLSTSGMGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGHIPNYPSLPPQLICQL HNLTMHADAETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFS QQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSV LSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWYPGSSSFNDGRDEATNGLMWLR GGPGDQGLNSLNFQGAGLLPWMQQRLDPSLLGNDHNQQYQAMLAAGLQNMGSGDLLRQQMLNFQQPLNYLQQSGNPNSPF QLQQQQAMQQSASSNIMQPQGPVLAENLSQHLLQKSHNNREDQTQQQQQTYQDSLLIQSDQLHLRQHTSLPSPSYSKPDF IDSSGKFAASVSPGQSMLSSLCSEGSGNLSNLSRSGQSMPTEQLPQQSWAPKYAPLQVNAFGNSMSHGQYSGKDTAMVSP HINSDTQNPILFGVNIDSSGLLLPTTVPRYTTASANTDASTMPLGESGFQGPLYPCMQDSLELLQSAGQVDPQNQTRTFV KVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPED IQKMGEQAEETLGPSSGQRMSSTGAESHDMVSGLGSLEY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 826 | 826 | 0.0 | – | |
| PANTHER | 1 | 826 | 826 | 0.0 | – | |
| SUPERFAMILY | 112 | 257 | 146 | 2.88E-49 | ||
| Gene3D | 126 | 230 | 105 | 5.2E-42 | ||
| CDD | 127 | 228 | 102 | 4.67564E-22 | ||
| ProSiteProfiles | 128 | 230 | 103 | 12.379 | ||
| SMART | 128 | 230 | 103 | 3.4E-24 | ||
| Pfam | 128 | 229 | 102 | 1.1E-21 | ||
| Pfam | 254 | 337 | 84 | 1.5E-34 | ||
| Gene3D | 292 | 365 | 74 | 8.3E-34 | – | |
| MobiDBLite | 469 | 496 | 28 | - | – | |
| MobiDBLite | 579 | 607 | 29 | - | – | |
| Gene3D | 712 | 805 | 94 | 7.1E-36 | – | |
| Pfam | 713 | 800 | 88 | 3.3E-7 | ||
| SUPERFAMILY | 715 | 790 | 76 | 5.1E-7 | – | |
| ProSiteProfiles | 717 | 800 | 84 | 23.882 | ||
| MobiDBLite | 808 | 839 | 32 | - | – | |
| MobiDBLite | 809 | 829 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Response to hormone | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus. |
Expression pattern of LotjaGi1g1v0101700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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