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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0103300 |
| Transcript ID | LotjaGi1g1v0103300.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MAU2 chromatid cohesion factor like; TAIR: AT5G51340.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q16NZ8|SCC4_AEDAE MAU2 chromatid cohesion factor homolog; TrEMBL-Plants: tr|V7BAU7|V7BAU7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0103300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:15876638..15883954) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGGCGGTGGCGGCGGGACTCTGGACTCTGGCGGAGCACCACGAGAACACCGGCGAAATCGCCAAAGCAATCAAATG CCTCGAAGCCATTTGTCAAACCGAAGTCTCCTTTCCCCCTATCGTCGAGGTCAAGACTCGTCTTCGCATCGCCACTCTCC TCCTCCACTATTCTCACAACGTCAACCACGCCAAAGCACACCTCGAACGTTCCGTTAGTCTCTCTCACACTCTCTATCAC TCTCTCGATTTTCGATTTTCCATTATCATCAGCGCAATTTTGAAACTGTTGATTTCTGTTTCGTGTTTTTTCAGCAATTG CTTTTGAAATCGATTCCTTCATGCTTTGAATTGAAGTGCCGAGCGTTCAGTTTGCTCAGCCAGTGCTACCAGCTTGTTGG CGCGATTCCGCCGCAGAAGCAAGTGCTGCACAAGGGTCTTGAGCTCACAGCTTCTGTTGGATACGAGTGAGTTACAGCTT TGCTTCTTTATCAGCAATGGCTATTGTTATTTTGTAGATTTTGTTTTAAAAAATTAGAATCTCGCGAGGTTTTATGTTGC GCTATTGGTACATAAATGGGACAGTGTGTTGTTGAATTGATCATTTTAAGTGTGTTTGGATCAGCGTTTGTGAATTTCGG TAAAATTGATTATAGTCAAAGTGAGTTGAAAATGAAGGGGTTTGTGTTTGGATACATTTATGAAAAAATGATTTTTGTTG GATAATGTTGTTAAATTTAGTGGTAAATCTCACAATTAATTTGTATGAGTTATTATTAGGGTGTTTGGTTTAGCTTTTGA AAATCAATTATAGCCAGAAGCTCCAAAGTGTAGCTTTTGAGTAGAAGTGCATTGGCTTTTGTGCCAACTGCTCAACCAAA CACAGTTCATGTTTGGTTTGGACACACGGTGGAAAGCCACAGTGAGCTAAAAGCACGGTGGACAAAAGCAATTTCTCTTA GCTTTAGTGGCTGTCCACCTCGACCTTGGCTTCTGTGGTTTTTCACTAGTATCTGAACATGCATTCAAACTATGATATAT TGGCTACTTTGGACTTGGGGCCGTGTTAGAACTTAGAAATTAGAAGAAGTTAGTACGATAGCACTGGAGAAGAGTTAAGG AAAGGAATGTAGTGTTTGTTGAGTGGACAAGCGAGGTCTGAGTTTGAGAAAGCGAGCAACTGTGTAGAACATTTGGGATA CCGAGAGTATTATTATTATTTATTATTATTGTTGTTGTTGTTATTATTATTATTGGTATTACTACTACTATTATTATTAT TGTTGTTATTATTTCCGTCCTCCTTTTTATACCTGTCATTTCTCCCTCTGAAACTAATTAACTGTTTCAACTAACTAACA TCGACTGCCCAATTTTTAATGAAGTTTTGCTAACACAGTACCAATAGATAGTAAATAAGAGCTATATACTTCATTGATAA ATTGTAACAAGCTTGGTGCATACATGTATCAGCTTGATGGGGAGTGTAAAAATAGTAGGATGTAAATAGTAAATGGTAAT TATAAATGTTGTATACATATTCTGGGCATTTTCAGCCTGAAAATTACCTTTGACTTTTTTATTTCACACGAGGGCACGTC TCTGATATATGTCAGAGGTGTTCGGCATTTGATATTGATGAAGGGCTGGAAAGTTTTCCTTTTTTTCTTTTAATTCTGGG CTAGTTACATTTGAATTATTTATCATATATGTGTATAACATGTTGTCAATAATTATATGAATGTACTCATGCCGCTTCTA CTACGTATTCGTATTTTCTTGAAGGATTTCAATGAAGTTATGGTCTTGCAACTTCAATTCACAGCTTGCAAATGCTTTGT CTATTGAAGGAGACTACCGAGGTTCACTCTCTGCCTTAGAGTGTGGATATGCCTGTGCTACTGAAGTATACTACCCGGAA TTGCAGGTACAATGTCAAAGTTAACAAGAAAAGAGATGTCCTTTGTTCCTTCTTTTCTTTTGACTGCTAATTTATTAATG AATTGAATTCTTACCACTAATAGGTGGAACCTTCTGGAAACTTATTGTCTTTTACTTTTGTAACAAAAATCCTAAAATCA CTTTTTGAATAACTAATGTTATATATAGTTAAAACTACATTACAACAACAACAAAATCTTTATCCCACTAAATGAGGTCG GCTATATGGATCACAATACACCATTCAGCTTGTTCAATGATATATATATATATATTAGTGGGTAGGCCTCTCCCAACAAA TTCTTCTCCACATACACCGCCCAGGGATCGAACCCTCGATTAAATGCTTAAGAAATATATACTCTCAAATATTCCAGCCG TTGTTGTCTTTCCCCTTATTCTTAAGTCCTCAGTCCCCACTTTCATCTTTTTATACTGCCTCGATCAAACTTTTTACTTC TTTTAACAGAGGTCTCTAGTCTCTCTAGTATGATATTATTGACATTAGCCCGTCTAATATCTTGTTTATAACAATGGACC AGATGTTTTTTGCCACTTCAATACTGCATGTCCACCTCATGCAATGGGACGATGATAGTTTGGTTGAGCAGGCTGTTAAT AAATGCAATGAGATTTGGGAGTCAATTGAGCCAGATAAAGTGAGTGCAAATATCCTTTAGCTTTGCTTTTGTTTATGTAG ATAATGTACACTCACAAACACATGCATGTTTTCAACTAAACTGTTCCATGATTCCTTTTTTACTTTGGTCTAATGTTTTC CCCCTTGCTTCCACGCACTCCTCAGAGAAGACAATGCCCTGGCTTACTCTTTTACAATGAATTGTTGCACATATTCTATC GACTGCGGCTATGTGATTACAAGAATGCTGCACCCCATGTAGACAATCTGGATGCTGCCATGAAGACTAGTATGCAGCAA ACACAACAAATGCAAGAGCTAGTGAAGGAGCTCAATGCTTTAGATCAAAGTCTCTCCAGATCTGACCTTTACCACAGGGA TAGGGCAGCACTATCTAAAAAGCAAGCAATGATTCAAGAGCAGCTGAGAAACATGACTGGATTGAGTCCAATTGGTCGGG AATCTCTGGAACCAGTATACTTTGGGAATGCCAGAAGGTCAATAGGAGATAAGCTTCAGTTAGCACCTCCTCCTATTGAT GGTGAATGGCTTCTTAAAAGCGCTGTCTATGCATTAGTTGATCTAATAGTTGTTATATTTGGGCGCCCAAAAGGACTTTT CAAGGAGTGTGGAAAGCGCATAAAGTCTGGGATGCGTATAATTCAAGGTTGTTCAGCAACTGTTTCTGTATTTGCTTGTG TAATTCTTTCTTCCTCTTTGGGCTTTGGTCTAAATTTATTGCTTGACATATAAAAGCAAATAACTGGACAGCAAATGCAA ATACTGCTAATTTGGAATGCAAAATCTTAATTGCTTGTCATGGTATGTCAAATAAATGTGTATAAATAAGCTTTCCACAT AGTGCAGCGCTGATCTTTGGTCTTGTATGAATTATTCCTTTTTTATATGCGCTTCCTCTGTCTATCACTGTTACCAGATG TTCCACAGTCATAAAATGTCCTTTTTATTGGTCCCTTGGCTTTTGAATTATTTGTTCTGAAACCATGATGAGTGGGTTAA GTTGTTTATGTTGTTCACACTTTGGATTGCTGTTGTGCATTGCTTTGGACACTAATATATTTAAGTCATTGCTATTGTGC ATTGCTTTGGAGACTAAATAATCCTTGCCACTTTGGACTGATTTTCTATTTGAAAATAATATTTCTTCCTTGCAGATGAG TTAGTAAAGCTTGGAATTACTGATGGCGTCAGAGGTGAGATTCATTATTTTTATCTTGCCCACAAACAAGGGTTCATTAT GCAACCTTTTTGAACTTTCTCTTTTAGCAGAAGTGGACTTACAACACTCCTCTATCTGGATGGCTGGAGTTTACTTGATG CTACTAATACAGTTTCTTGAAAACAAAGTGGCCATAGAGCTCACAAGAGCAGAGTTTGTTGAAGCACAAGAGGTTGGTTA TGTTCCTATCGTATTTTTTGTTAGCTCTAAGGATGAGAAGATGTGATAGCTTGCATTTTATGGTACAAAATTTCAATTCT CAATTAGTAATACACCTCACTAGCTGGCTTGCTTCTGGTGATATTTTTCTTATACTAGTTGATTTAAACAGTTGGCAGTG AATTTGCATCCCCTAATGCTCCAGATTTGAAACCATTGATGAGAATCTCTGCAATTTTTCAGGCTTTGATACAGATGAGA AATTGGTTCATGCGGTTTCCAACTATATTACAGGCATGTGAATGCATCATTGAGATGCTTAGAGGCCAATATGCTCATGC TGTTGGCTGTTATAATGAAGCTGCTTTTCATTATATTCAAGCAGTAAAGGTATATATTAGATTTGTCTGTAATGAGATAT GATATAATAGCAATGATAAAGTGCAGTCTTTGTTTTGGTAATTGTGACGCAATATACATTCATACTGTGGTTTGGCATGG TAGAAGCCATATTTATGGTTTTCTGTTCACTGTTCAGAGATTTATTAAAAATTGTTTGTCAGAATAATTTCATGGTAATC CAGAAATAACTACATATTTCTGTGCAGCTTACAGAGAGTAAATCAATGCAAACTATGTGCCATGTTTATGCAGCTGTTTC ATATATCTGCATTGGTGATGCTGAATCTTCTTCACAGGTGGAGCACCTATGCTGCAAATTGAATTGGTCATATGTACCAT TTTTTAAGTATTCAATTCAGTAGACAATATCTTTTGACCAAATCATAGATTACCTGCAGGCACTTGATTTGATTGGGCCA GTTTATGGAGTAATGGATTCTTTTGTGGGAGTTAGAGAAAAAACAGGTGTTCTTTTTGCATATGGTCTTTTATTGATGAA GCAACAGGATCTACAAGAATCAAGGTTAGTTTTGACTTTTGAGATAATTTTTGTAACTTAATCAATCAGTTTGTTTCTGT GTATGAATGTCAACTTTATAATTTTATGCAATGTGTCAGAATATTTCTTCTTTTATTTGATAGGAAATGATTTAAAATCT TGCTTGAGAGCTGACCCTTGCACTGCAGAACACAGAAGATAAGGATATTTCTGGAAATAAACTGAATAATAAACTCAAAC GAATCCAGCAGTTAAACCTTCTTACAAGGGAAAACCCTTACAACTCAATACTCAATATGAATCCAAACCTAATGAGAGGA CTCTTTTTTATTATAAACTAACCCTACTAAGCAAATAACACTAGCCCAACATACACCCAACTCAAATAATAAAATAGACT CATCCAACAAGCTTAAACTAACTGACAGAGACAGATGAAATCAACCCGGCCCAAAGTCTAATAGGCCCATCCTGGGTCCG TGCGGCTCAATTGCTGCCTTCTCTTCATCATCACGCCCAAAGGGCTTCTTCCTTCTAGAGTAAACCTTCCAAATACGAGG CTTCTCTTGGATCCTAACATTATGTCATATAGTACGTTTGAGTGTTATTTGGACCTTAAAATTAGGTAACAGAATAATTT ACCTCACATGCAACTGAACAGTTGCATACATTCCCATATATCATTTATCTTTCTTCCTCCTTCATCTAAGTTGCAATTTT TTTTTATTGCAGAAATCGCCTGGCAAGGGGATTGCAACTGACACATACTTATTTGGGGAACCTTCAACTTGTTTCTCAAT ATCTGACAGTCCTTGGCAGTTTGGCACTTGCGCTGCAGGACACAGCACAGGCGAGGGAGATATTGAAATCATCTTTGACC TTGGCAAAAAAGCTTTATGATATTCCTACTCAGATCTGGGTGCTGTCTGTTTTGACAGGTACTTCTCTAAGATTGTAGTT TGTGATTGTAATAATTCTCCCTTTATGACTTTCAGGAGTGCCCTAGTTACAGTTTGCAAATCGCACTATTTTATTCCTGT CTGAGTATTGAGAGTTGAGACAACCTTCAGAGTGTCTTGAAGATTTGTGTTTTTCTGTGGCTTAATAATAAACCTTGTTT AAAGGTGGCTGTAAGGAAAGTCGGAAACTTTCTCCCTGAGCTATATGAATCAGTTGTCTAATTATACAACAGCCTTTTAC TTTTTTGGGTGTTACTTTGTGTGGTAATTCTAAGTCAGTCTCTTTTTGGGATCCAGTTATCCAAATTATTTGTGAAGAGG TTTTATAGATGCAATGGTTCTTTTTTTTTTCTGTGATTAGTTCACCTTAGTCCAGTCTTGTTCATGAAGTAATCCTTTCT ATTAACTCTATTTACTATGCATGGGGTTTTACTGAGAGGATAAAGGAAATTGCAATTCACAAGGGCCTTCTTTTGTGTAG GACGAATTGAGACGGTATTTTGTAAATACAGAATTATCTTGTGATTATGCTGAAATCAAATACATAAATATGAATCAGAA TAGAACACACCATTGATTGAGTTGGGAGATTTGTTATAAGGGTCGTAGAATATCCGTGTCTTAAGAAATCTGCCATGTGA AGGGTTTACCCTTGGTGAAGATTTACTTATTACTTATTAATCCATCCTATAATTCACAATAAAATGCTTCAAAGTTTATC TTAGATCTGATTTTTGGATCAAGTCCAGGCAAAAATCAACTAGCCCTCGTGTATCAACTTTATGGTTAAGATTTACTCAT TATTAATCAACTGTATGGTTAAGATTTACTTTCACACTTGGCTCTCTCACTTGATACATCCTATTGACAGATAATAATTA GATAGATAATTGAGACCAAAGCCCAAGGGCGCATTGTCGTCTAGGGCTATCTCTGTATTAATGTTATTTGTTGTATTTTA TGCTTTTTTATGTTCTGTCTTTGCATTTATTGTCCTTAGTTGCATTCTCTTCATTTCTTTCTTTAAGTTTGTTTTTATTG AAAACGAGTTTATTTTACGAAGATTTGGTTCTTGCAGGTTTATATAAAGATTTAGGGGAAAGGGGAAACGAAATGGAGAA TGCTGAGTACCAGACAAGAAAAACGATTGATTTGCAGAGGAGAATAGCAGATGCAAATGCTTCCATCTATCATCTTGAAA TAGTAAGCTAATTTGACAAAGAAGTACTATGCGTTATATGTTTGGATTTATACTGAGTTATTGTTTGTTTTACCATTTTG ATTAACAGATTAACAAAGTAAGATTTGAAGTTGACCCATTGCATGAGTTGGACGCCAAGCGTGCAATGGCAGGCCCAACC ATGGGAGTCAGTCTTGACATCCCAGAATCTATTGGTCTGTCAGCACCCTTACCTGCTCCATCGTCTTCAAGACTAGTTGA TATAGACACTGGAAAACTTAGAAAATGGAGATCTTAG
CDS sequence (LotjaGi1g1v0103300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGCGGTGGCGGCGGGACTCTGGACTCTGGCGGAGCACCACGAGAACACCGGCGAAATCGCCAAAGCAATCAAATG CCTCGAAGCCATTTGTCAAACCGAAGTCTCCTTTCCCCCTATCGTCGAGGTCAAGACTCGTCTTCGCATCGCCACTCTCC TCCTCCACTATTCTCACAACGTCAACCACGCCAAAGCACACCTCGAACGTTCCCAATTGCTTTTGAAATCGATTCCTTCA TGCTTTGAATTGAAGTGCCGAGCGTTCAGTTTGCTCAGCCAGTGCTACCAGCTTGTTGGCGCGATTCCGCCGCAGAAGCA AGTGCTGCACAAGGGTCTTGAGCTCACAGCTTCTGTTGGATACGAGATTTCAATGAAGTTATGGTCTTGCAACTTCAATT CACAGCTTGCAAATGCTTTGTCTATTGAAGGAGACTACCGAGGTTCACTCTCTGCCTTAGAGTGTGGATATGCCTGTGCT ACTGAAGTATACTACCCGGAATTGCAGATGTTTTTTGCCACTTCAATACTGCATGTCCACCTCATGCAATGGGACGATGA TAGTTTGGTTGAGCAGGCTGTTAATAAATGCAATGAGATTTGGGAGTCAATTGAGCCAGATAAAAGAAGACAATGCCCTG GCTTACTCTTTTACAATGAATTGTTGCACATATTCTATCGACTGCGGCTATGTGATTACAAGAATGCTGCACCCCATGTA GACAATCTGGATGCTGCCATGAAGACTAGTATGCAGCAAACACAACAAATGCAAGAGCTAGTGAAGGAGCTCAATGCTTT AGATCAAAGTCTCTCCAGATCTGACCTTTACCACAGGGATAGGGCAGCACTATCTAAAAAGCAAGCAATGATTCAAGAGC AGCTGAGAAACATGACTGGATTGAGTCCAATTGGTCGGGAATCTCTGGAACCAGTATACTTTGGGAATGCCAGAAGGTCA ATAGGAGATAAGCTTCAGTTAGCACCTCCTCCTATTGATGGTGAATGGCTTCTTAAAAGCGCTGTCTATGCATTAGTTGA TCTAATAGTTGTTATATTTGGGCGCCCAAAAGGACTTTTCAAGGAGTGTGGAAAGCGCATAAAGTCTGGGATGCGTATAA TTCAAGATGAGTTAGTAAAGCTTGGAATTACTGATGGCGTCAGAGAAGTGGACTTACAACACTCCTCTATCTGGATGGCT GGAGTTTACTTGATGCTACTAATACAGTTTCTTGAAAACAAAGTGGCCATAGAGCTCACAAGAGCAGAGTTTGTTGAAGC ACAAGAGGCTTTGATACAGATGAGAAATTGGTTCATGCGGTTTCCAACTATATTACAGGCATGTGAATGCATCATTGAGA TGCTTAGAGGCCAATATGCTCATGCTGTTGGCTGTTATAATGAAGCTGCTTTTCATTATATTCAAGCAGTAAAGCTTACA GAGAGTAAATCAATGCAAACTATGTGCCATGTTTATGCAGCTGTTTCATATATCTGCATTGGTGATGCTGAATCTTCTTC ACAGGCACTTGATTTGATTGGGCCAGTTTATGGAGTAATGGATTCTTTTGTGGGAGTTAGAGAAAAAACAGGTAAATCGC CTGGCAAGGGGATTGCAACTGACACATATTTGGCACTTGCGCTGCAGGACACAGCACAGGCGAGGGAGATATTGAAATCA TCTTTGACCTTGGCAAAAAAGCTTTATGATATTCCTACTCAGATCTGGGTGCTGTCTGTTTTGACAGGTTTATATAAAGA TTTAGGGGAAAGGGGAAACGAAATGGAGAATGCTGAGTACCAGACAAGAAAAACGATTGATTTGCAGAGGAGAATAGCAG ATGCAAATGCTTCCATCTATCATCTTGAAATAATTAACAAAGTAAGATTTGAAGTTGACCCATTGCATGAGTTGGACGCC AAGCGTGCAATGGCAGGCCCAACCATGGGAGTCAGTCTTGACATCCCAGAATCTATTGGTCTGTCAGCACCCTTACCTGC TCCATCGTCTTCAAGACTAGTTGATATAGACACTGGAAAACTTAGAAAATGGAGATCTTAG
Protein sequence (LotjaGi1g1v0103300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAVAAGLWTLAEHHENTGEIAKAIKCLEAICQTEVSFPPIVEVKTRLRIATLLLHYSHNVNHAKAHLERSQLLLKSIPS CFELKCRAFSLLSQCYQLVGAIPPQKQVLHKGLELTASVGYEISMKLWSCNFNSQLANALSIEGDYRGSLSALECGYACA TEVYYPELQMFFATSILHVHLMQWDDDSLVEQAVNKCNEIWESIEPDKRRQCPGLLFYNELLHIFYRLRLCDYKNAAPHV DNLDAAMKTSMQQTQQMQELVKELNALDQSLSRSDLYHRDRAALSKKQAMIQEQLRNMTGLSPIGRESLEPVYFGNARRS IGDKLQLAPPPIDGEWLLKSAVYALVDLIVVIFGRPKGLFKECGKRIKSGMRIIQDELVKLGITDGVREVDLQHSSIWMA GVYLMLLIQFLENKVAIELTRAEFVEAQEALIQMRNWFMRFPTILQACECIIEMLRGQYAHAVGCYNEAAFHYIQAVKLT ESKSMQTMCHVYAAVSYICIGDAESSSQALDLIGPVYGVMDSFVGVREKTGKSPGKGIATDTYLALALQDTAQAREILKS SLTLAKKLYDIPTQIWVLSVLTGLYKDLGERGNEMENAEYQTRKTIDLQRRIADANASIYHLEIINKVRFEVDPLHELDA KRAMAGPTMGVSLDIPESIGLSAPLPAPSSSRLVDIDTGKLRKWRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 530 | 529 | 4.0E-206 | ||
| Pfam | 21 | 516 | 496 | 9.9E-9 | ||
| Coils | 250 | 270 | 21 | - | – | |
| PANTHER | 544 | 628 | 85 | 4.0E-206 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitotic sister chromatid cohesion | The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission. |
Expression pattern of LotjaGi1g1v0103300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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