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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019440
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.659s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0103300.1
n.a. MAU2 chromatid cohesion factor like; TAIR: AT5G51340.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q16NZ8|SCC4_AEDAE MAU2 chromatid cohesion factor homolog; TrEMBL-Plants: tr|V7BAU7|V7BAU7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0103300 LjG1.1_chr1 15876429 15885033 +
3 domain predictions
1 GO term
LotjaGi1g1v0103300.2
n.a. MAU2 chromatid cohesion factor like; TAIR: AT5G51340.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q16NZ8|SCC4_AEDAE MAU2 chromatid cohesion factor homolog; TrEMBL-Plants: tr|V7BAU7|V7BAU7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0103300 LjG1.1_chr1 15876638 15883954 +
3 domain predictions
1 GO term
LotjaGi1g1v0103300.3
n.a. MAU2 chromatid cohesion factor like; TAIR: AT5G51340.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q16NZ8|SCC4_AEDAE MAU2 chromatid cohesion factor homolog; TrEMBL-Plants: tr|V7BAU7|V7BAU7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0103300 LjG1.1_chr1 15876638 15883954 +
3 domain predictions
1 GO term
LotjaGi1g1v0103300.4
n.a. MAU2 chromatid cohesion factor like; TAIR: AT5G51340.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q16NZ8|SCC4_AEDAE MAU2 chromatid cohesion factor homolog; TrEMBL-Plants: tr|V7BAU7|V7BAU7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0103300 LjG1.1_chr1 15876638 15883954 +
3 domain predictions
1 GO term
LotjaGi1g1v0103300.5
n.a. MAU2 chromatid cohesion factor like; TAIR: AT5G51340.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O15743|SPNA_DICDI Protein spalten; TrEMBL-Plants: tr|K7KAE5|K7KAE5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0103300 LjG1.1_chr1 15876638 15883954 +
2 domain predictions
1 GO term