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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0146400 |
| Transcript ID | LotjaGi1g1v0146400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Annexin; TAIR: AT1G35720.1 annexin 1; Swiss-Prot: sp|Q9SYT0|ANXD1_ARATH Annexin D1; TrEMBL-Plants: tr|I3SZS2|I3SZS2_LOTJA Annexin; Found in the gene: LotjaGi1g1v0146400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:24869192..24872506) extracted from Lotus japonicus Gifu genome v1.2.
CTGCATACTGATCACGCATGACTCAACGAACCTTGGCAATATTGATTATCCTCAACTTTGGCAAACTGACCAAATGTAAT AACATGATTTTATAATCATGAACTGAATGTTTATTTTCTATTTGATAATGGAGAATTTGATCTAGATTGTAAATTTCTGA AAGCTACGCTGAGTTTTTATGTTACCCTCTTTACTTCATAAGGTCAAAATCATCTAACATTTTGTTTTTCTAGCTCCTCC TACCTCTCATGAGTTCTTACCGATATGAAGGAGATGAGGTCAACTTGACTCTGGCAAAATCTGAGGCAAAATTACTGCAC GAGAAGATTACAGATAAGGCTTATAATGATGACGACCTCATCAGGATTTTGGCTACAAGGAGCAGAGCCCAGATTAATGC TACTTTGAATCACTACAAAGATGCATTTGGAAAAGATATCAACAAGGTACATATTGCATGGCTTTCAAATTGTAACATGT TATCTAATTTACTTCATTTTCATCTCATTTTGTTGCTCTATAGTAACCATGCATTTTAGTTGTGCACCCAGCAGCACATG TAACACCCCCCTTTTTTCCATTGTTTTATTTAAAAACGTTTATCAGAGTTTAAACACATATCAAGGGAGTATTACACTTC TTCACGAAAACTCATTAAAATTAACACTGATTGTGTTTGAAAATTTATAAGTTCATATGCTTTTCAAAGAATGAATTATT TCTGCCAATGAAATTTCTAAACCAGTCAGATAATCCTAAGATGCATAAAATCACTTATTTAAATAGGTTTATCTTCCATG ATATTCCAATAAAATTTATCATACTCAAAACTGAATTTCATAGGCACATCGGCCATCAACAGTACGACATCGCCATAATT TAGAAAATTATTCAACAACTTCCATAAGGAGAGGTTATAATTAATCCTCTCAACATAAATGTAAAAGTAACGTAAAATAT CTACCCAGTGTTACATTACAGAGCAAGACACTTATTTTATTATAATAATAATAATAATAACATAAGCTAAGACTCTCCGA AGTTACTCCTCATGAGCCACATCTCTACCTCCAATACCTGAGCGATGTCGCATAGAACATCATTCCAACAGAAGGGTAAG AACTTACATTGTATAAAATATAGCATAACAAAGAGCAAGTAAACTATTCAGATCCTACTTTATAAACTTTTCACCTTTTC TTTAAAATCTGAGTGATTATAATATTTTCTCTCAAGATAGTTTCACAATTCTTATTAATGTTTCAGAAAATTATAAGCTT AAAGAAGAATAATAATTCGACTTTACCACAACAGCAAAACAATTCACCAACAAATCACCAAACACATAAAACCACTGAAA ACGTGAAACTTAGTGTGTGAGACTCTAATGTATGCATGTGGTACCAATTGTTAACCTTAGCGGTATCACCGCGTCCACTC CAGACAGTTAACCACCAATGAAGCCCACTCCAGACTTCCAGAACCACGCCAGTTCTGGGACAAACCTCAGTTTTCCGATG AAAACCAACACGTTGCCTCTTGACTAAATGAAGTGTATTTCGTGCAAAAACTCATAAATTAAAACATGCAATTTGAGACC ACTCCAGCCCCAAATATATAACATATTTTCTCACCAAATTCCATAACGGAAATCACACCAAAATTGCACAAAATAACACT TCAATACAATTATCAAATCATTCACTATTCCACTGACAAAATAGCAACACAAAATCATTAAATGTCTCATATCAATTACT AGAATCAGTTTCAGAATCAATCCCAAAAATAAGCAGAAACATAGCAAACTTGCATATAATCCTGGTACTAAATGAGCTGT CCAAAAATTATGAAAATTTTACCAAGCATAGCCTTATACGTTAGCTTTCATATAAAATTGGTTTCACCCAATTTGGAATT CTGTAGAGGGAGTTATGCTCTCTACAGCACAGGCTGTTAGGGTGTCTGCGAGCAGAAATAGAATTAACTTGCAGATAATT CTGGTATTGAAACAGCAATCCAAAAATTATGAAAATATTACCCAATATAACCCTATGAGATAGCTTTCATACAAAATTAG TTTCACTCAATTCGAAATTATTTAGAGAGAGTTATGCTCTCTACAACACAGGCTGCTAGGGTGCCTGCGGGCAGAAACAG AATGAACTTGCAAATGATTCTGGTATTGAACCAGCAATCGAAAAATTATGAAAATATTACCCAACATAGCCCTATGAGTT AGCTTTCATACAAAATTGGTTTCACTCAATTTGGAATTCTGTAGAGAGAGTTATGCTCTCTATAACACAGACTGTTAGGG TATCTGCGGGCAGAACATAACAGAACCCAATTTTCCCCAGAACCTCAATTTCGCTCAAAATCAATTTTGCTCACCACATT TTAACACTCAACACTGTCTCTCAATTCTGAATTTTCAAAGAAGATGGGGTTCCTTCATGTTAAACTCAACCTTTGTTATT CTACAATTATACAAGGTAAATTCAAACCCTTACCTTCTATGACACCGGTACAAAGCCTCCTTGACCCTTTTCTTCTTGAA GATCAAATTCTAGGTTTTCTCCACCTTTTCTCCTCTCCTTCACCTTTCACGTGTTTCTTTGTTCTGCTGCTTCTCTAATC CTAATTTTCTGATTTCTTTCTTTTTAATTCTCTCATAACCCTTAAATAATCTTACAATGGGCCCCACTCCCAACTACTCA CTTAAAACCTAAAACCCTTATTTATCTATATCACATAATAACTTAATTATCTAATAAAATCACTTAATGACCTTATCATC TAATTAAATCACATAATCACATATTCATCTAATTAAATCGCATAAATTATCAAAATACCATATAGCATAATAATAATTAA GATAAAATAATAAATAACCTAATAACGAAAAGTGGGGTGTTACAGCACACACTGAATTTGAATTGAAATTTTAGAAGCAC ACTCAGGTAGCTTTTGGAGTAGAGTTGGGCCTAATCCGAATTCTAATGAATGTGACAGGACCTCAAAGCTGAACCGAAGG ATGAGTACCTGTCTTTACTGAGAGCCACTGTCAAGTGCTTGGTCCGTCCTGAGAAGTACTTTGAGAAGTTTATTCGTTTG TCTATCAACAAGCGAGGAACAGATGAAGGAGCCCTTACAAGAGTGGTTGCCACGAGGGCGGAGATTGATTTGAAAATCAT TGCAAATGAGTATCAAAGGAGGAGCAGTATCCCTCTTGATCGCGCCATCATCAAAGACACCAACGGGGACTATGAGAAAA TGCTTTTGGCACTCTTAGGACATGAAGATGCTTAA
CDS sequence (LotjaGi1g1v0146400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCTTACCGATATGAAGGAGATGAGGTCAACTTGACTCTGGCAAAATCTGAGGCAAAATTACTGCACGAGAAGAT TACAGATAAGGCTTATAATGATGACGACCTCATCAGGATTTTGGCTACAAGGAGCAGAGCCCAGATTAATGCTACTTTGA ATCACTACAAAGATGCATTTGGAAAAGATATCAACAAGGACCTCAAAGCTGAACCGAAGGATGAGTACCTGTCTTTACTG AGAGCCACTGTCAAGTGCTTGGTCCGTCCTGAGAAGTACTTTGAGAAGTTTATTCGTTTGTCTATCAACAAGCGAGGAAC AGATGAAGGAGCCCTTACAAGAGTGGTTGCCACGAGGGCGGAGATTGATTTGAAAATCATTGCAAATGAGTATCAAAGGA GGAGCAGTATCCCTCTTGATCGCGCCATCATCAAAGACACCAACGGGGACTATGAGAAAATGCTTTTGGCACTCTTAGGA CATGAAGATGCTTAA
Protein sequence (LotjaGi1g1v0146400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSYRYEGDEVNLTLAKSEAKLLHEKITDKAYNDDDLIRILATRSRAQINATLNHYKDAFGKDINKDLKAEPKDEYLSLL RATVKCLVRPEKYFEKFIRLSINKRGTDEGALTRVVATRAEIDLKIIANEYQRRSSIPLDRAIIKDTNGDYEKMLLALLG HEDA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 2 | 163 | 162 | 7.99E-48 | ||
| PANTHER | 2 | 163 | 162 | 2.9E-90 | – | |
| PANTHER | 2 | 163 | 162 | 2.9E-90 | – | |
| PRINTS | 9 | 29 | 21 | 1.8E-17 | ||
| Gene3D | 13 | 88 | 76 | 1.4E-20 | ||
| ProSiteProfiles | 14 | 85 | 72 | 22.832 | – | |
| Pfam | 19 | 81 | 63 | 1.8E-14 | ||
| PRINTS | 22 | 48 | 27 | 3.9E-9 | ||
| SMART | 31 | 79 | 49 | 8.7E-4 | ||
| PRINTS | 74 | 92 | 19 | 1.8E-17 | ||
| ProSiteProfiles | 89 | 160 | 72 | 20.701 | – | |
| Gene3D | 90 | 162 | 73 | 8.5E-25 | ||
| Pfam | 98 | 158 | 61 | 2.7E-15 | ||
| PRINTS | 102 | 122 | 21 | 3.9E-9 | ||
| ProSitePatterns | 106 | 158 | 53 | - | ||
| SMART | 106 | 158 | 53 | 1.8E-19 | ||
| PRINTS | 146 | 159 | 14 | 3.9E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Calcium-dependent phospholipid binding | Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium. |
Expression pattern of LotjaGi1g1v0146400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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