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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR009118
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 20 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.915s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0166899.1
n.a. PREDICTED: annexin D1-like isoform X1 [Cicer arietinum] gi|502178085|ref|XP_004516176.1| chr0 79316482 79321956 +
2 domain predictions
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Lj0g3v0203419.1
n.a. PREDICTED: annexin-like protein RJ4-like [Cicer arietinum] gi|502158067|ref|XP_004511018.1| chr0 100833752 100835464 +
2 domain predictions
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Lj0g3v0261939.1
n.a. PREDICTED: annexin-like protein RJ4-like [Glycine max] gi|356508416|ref|XP_003522953.1| chr0 135742565 135745940 -
2 domain predictions
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Lj0g3v0261939.2
n.a. PREDICTED: annexin-like protein RJ4-like [Glycine max] gi|356508416|ref|XP_003522953.1| chr0 135744519 135745940 -
2 domain predictions
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Lj0g3v0261959.1
n.a. Annexin-like protein RJ4 [Medicago truncatula] gi|357456735|ref|XP_003598648.1| chr0 135750103 135752699 -
2 domain predictions
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Lj0g3v0261959.2
n.a. Annexin-like protein RJ4 [Medicago truncatula] gi|357456735|ref|XP_003598648.1| chr0 135750103 135754198 -
2 domain predictions
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Lj0g3v0363079.1
n.a. PREDICTED: annexin-like protein RJ4-like isoform X3 [Cicer arietinum] gi|502158052|ref|XP_004511012.1| chr0 191513378 191516316 -
2 domain predictions
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Lj4g3v2823370.1
n.a. PREDICTED: annexin D2-like [Cicer arietinum] gi|502140127|ref|XP_004504069.1| chr4 37778753 37782147 -
2 domain predictions
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LotjaGi1g1v0146400.1
n.a. Annexin; TAIR: AT1G35720.1 annexin 1; Swiss-Prot: sp|Q9SYT0|ANXD1_ARATH Annexin D1; TrEMBL-Plants: tr|I3SZS2|I3SZS2_LOTJA Annexin; Found in the gene: LotjaGi1g1v0146400 LjG1.1_chr1 24867004 24873361 +
2 domain predictions
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LotjaGi1g1v0146400.2
n.a. Annexin; TAIR: AT1G35720.1 annexin 1; Swiss-Prot: sp|Q9SYT0|ANXD1_ARATH Annexin D1; TrEMBL-Plants: tr|I3SZS2|I3SZS2_LOTJA Annexin; Found in the gene: LotjaGi1g1v0146400 LjG1.1_chr1 24869192 24872506 +
2 domain predictions
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LotjaGi3g1v0062700_LC.2
n.a. Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|A0A1J7HNT0|A0A1J7HNT0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0062700_LC LjG1.1_chr3 6628911 6632170 -
2 domain predictions
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LotjaGi3g1v0062800.1
n.a. Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|I3SNL5|I3SNL5_LOTJA Annexin; Found in the gene: LotjaGi3g1v0062800 LjG1.1_chr3 6634932 6637193 -
2 domain predictions
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LotjaGi3g1v0062800.2
n.a. Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|I3SNL5|I3SNL5_LOTJA Annexin; Found in the gene: LotjaGi3g1v0062800 LjG1.1_chr3 6635318 6637146 -
2 domain predictions
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LotjaGi3g1v0062900.1
n.a. Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|I3S6J0|I3S6J0_LOTJA Annexin; Found in the gene: LotjaGi3g1v0062900 LjG1.1_chr3 6641317 6643712 -
2 domain predictions
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LotjaGi3g1v0062900.2
n.a. Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|I3S6J0|I3S6J0_LOTJA Annexin; Found in the gene: LotjaGi3g1v0062900 LjG1.1_chr3 6641317 6644499 -
2 domain predictions
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LotjaGi3g1v0112700.1
n.a. Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|B7FJY0|B7FJY0_MEDTR Annexin; Found in the gene: LotjaGi3g1v0112700 LjG1.1_chr3 13890384 13894375 +
2 domain predictions
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LotjaGi3g1v0112700.2
n.a. Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|B7FJY0|B7FJY0_MEDTR Annexin; Found in the gene: LotjaGi3g1v0112700 LjG1.1_chr3 13891658 13894399 +
2 domain predictions
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LotjaGi3g1v0112800.1
n.a. Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|A0A0R4J363|A0A0R4J363_SOYBN Annexin; Found in the gene: LotjaGi3g1v0112800 LjG1.1_chr3 13898415 13902293 +
2 domain predictions
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LotjaGi3g1v0112800.2
n.a. Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|I1JWG6|I1JWG6_SOYBN Annexin; Found in the gene: LotjaGi3g1v0112800 LjG1.1_chr3 13898756 13902137 +
2 domain predictions
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LotjaGi4g1v0397700.1
n.a. Annexin; TAIR: AT5G65020.1 annexin 2; Swiss-Prot: sp|Q9XEE2|ANXD2_ARATH Annexin D2; TrEMBL-Plants: tr|I3RZY7|I3RZY7_LOTJA Annexin; Found in the gene: LotjaGi4g1v0397700 LjG1.1_chr4 77540405 77544333 +
2 domain predictions
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