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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0158600 |
| Transcript ID | LotjaGi1g1v0158600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT1G21780.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9XHZ8|Y1178_ARATH BTB/POZ domain-containing protein At1g21780; TrEMBL-Plants: tr|I3T1G3|I3T1G3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0158600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:29404316..29407220) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGATTCCAAGGTCGAAACCATTTCCCGTTTAGCTCAATGGAGAATCGAGAATTTCGGACCCTGTTCCTACAAGAA ATCCGAACCTTTCAAGCTCGGAATTTGGAACTGGTACATACTTCTTCTATCATCCATCTCATGATGATGTTGTTCCTGCG TTGAAATTCAGCTTGATTAATATTGAATTGGTTCCATTTTTCAGGTACATGTCCATAGAGAGAAACAGGTACCTGTATAT CCATATTTTCCCAGAGCCTTCAAAGCTTTCTAAGGAGCAACCACCTGTGGCTCGTTTCATTCTTCGTGTCTCCAGCACTG GCTCCACCCGTAGATTTTATATTTCTCCTGGTTTGTTTTCTTCTTCCTCTTGTTTCTGGTGTGTTTTGCCTTGATGGGTG TTTGTCAAAATTTGATCTTGCTGCTGATATTGGAAGAAATGAATGAGCTTTTAGAAATAACTCAGGGTTTTATTTTGTTT ATAGTTTGAGATTTTGGGAGTTTAATTATTAGTGGGAAATTATGTGAGCACAATTCCTCTGGGTGTTGATCTGTGTGTGA GCTGTGATTGAAAGGGACAGGGGTTGAGGGTATTAATTTCATCAAGATAGGATTGAATATATTGATTGAGACTTTGATTT TTGGGTAAGATTATTTTTTTTCTTTCCTTTAGTCATTGCTATGTGGCTACTGTTACTAAGGGATTCATCACAAAGGGTCT CCACTAGAGACTGATTAGGGAATAGGATAGTTTGAAGAAAGGAGGCTTTTATTCTTTATTTTTTTTGAGGTTTTGATGTT TTGATGTTTTATGGTGAGTAAATCCTTCTACCATTGATTGTAAAGTCAAAATCAATTTTGAGGAGAAGCGGAGAAGGTCA GAAGCTTCTGTGAGTAGCTTTTGAGTTTCATAATTGATTATGAGGAAAAACAATTTGATCCAAACATGCTAGAAATTGGA TAAGATGGAGTGCTGTAAAGTTACTATTCTATTGTTTGGATGTTTGATGGAACATAAATAAAGAATATTCTGTGAGAAGT TTTGGAGTTTCATAATTGATTATGAGGAAAAAAGAAGTTGATCTAAACATGCTAGAAATTGGATAAGATGGAGTGCAATG AAGTTACAATTTTATTGTTTTTGTGATGGAACAGAAATAAAGACTGGTTTCATCCTGGTTTTTATGTTGTATTGCATTCA TATCGTTAGTAGCTACCAAGGTTTCATGTTGGTGGCCGTAACATCTCGGTTGTGGCCACCACAATCACATCCGGCTGTGA TTGGGAATAGCATCAGGATTGTATCAGCCTGTAATGTGACCACGGCCACAATTCAGAACCATGGTTGCTATTAAGTAGGG ACTTTTTTGATGGGCTTACACAAGCAGAACTGCAGCCAATAATTATGATGAAAATCTTTTAGCAAAGAATTGATTTGGGT GGTGATTACCTTCTAATTTCTCACCCCTTCTTGTTACTTCTCTTCACTAAGTTAGCCTTTTGGTTTTTCTGGAAATGATA AGTTTAGTTATGAAAGCTTTGGAAACAATAGGAACTTATGAAGCATGGGGAACATTAGTATCTTAGAAAATATTCCAATT CTTTATTATTCTTGTAAATAAAAGGTCGATTCTAGATTTCCAAGTTAGTAACGCAAGCTTCAAGTTTCCTTTTCAATTTC ACTAATTTGAGACATCAGGCTTTTCCTTTATACCTTGAGTTTTGGCCCTATGACATCGATTTCGTATATCTGCTGTTGCA CACACACTCTTCACTTCTATTTACCAACAAGAAATATAGGCATAGTATTGATCGTGCATACCCCCATTGCCAACCAAGAA GTATGAAATTGCATTTACCTCTAGCGAGTAACTAGTTCAACATTGTATGATGAAATGCTGACTCAGGTTGGGTCTTCACT TATATGTGCTTGTAATGCCGCAGTTCATGAAAGGGTGCTTAGAACAAGTGAGGACTTTGTCTGGCCTGTGGATACAACAT TCCTTGGTCGCTTCATCATTGATGTTGAATTTCTTGACCTGAAAATCTACCCTACGAGTGTGAGTCCGTAACTTTTATTG TCATTACTATGTTAATCTGATATTATGCAAACAGATAATAATAAAAATTTATGCACAAATATAATGATGTTTTTTTTTTC TCTTCTATCTGTTCATAAAGTATTGGTACACGTTACTTTCTTAGCAACTTATCGTGTTTGGTGACGCGCATTATCCCCAG GAAACCTCTGAGCTAGTATTAGATTGTTGCTTCTTAACAACCTTTGTTGATTTCAGGGTGGAGTAGCCGGTTCCATATGG CCATCTGACGGAAAACTGCAATCTGTTGCATCTCAAAGCGCTCTCCGATGCCTCTCCCGCATGCTTGACGAGGAAATACA CGCTGACCTCACCATTGTCACCGCAGATGGTACACTGAGAGCCCATAAGGCAGTTTTGTCTGCAAGCTCCCCTGTGTTTG AGGGCTTGTATCATCATCAAGACGTCGTTGATGATGAAAAAGAGACCTCTACAATCCACATGGAAGACATGTCACAACAA TCCTGCAAGGCCCTTCTGAGCTACTTGTACGGCACAATAAAACATGAAGATTTCTGGAAGCACAGGCTTGCGTTGCTCGG AGCAGCCAATAAATTCGAAATTGGTGATCTCAAAGATGCTTGTGAGGAAAGCCTGCTGGATGATCTTACCTCAGGAAATG TTCTCAGCAGGCTAAATGAGGCTTGGCTGTACCAGTTGCCCAAGTTAAAGAAAGGATGTTTCACATTCTTATTTGACTTT GGCAAGATATATGATGTTAGAGAGGAAATAAACAACTTTTTTCTCCTTGCGGAGAGGGAGCTGATGATGGAGATGTTTCA GGAAGTGCTTACTGTTTGGAAATAG
CDS sequence (LotjaGi1g1v0158600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTGACGAGGAAATACACGCTGACCTCACCATTGTCACCGCAGATGGTACACTGAGAGCCCATAAGGCAGTTTTGTC TGCAAGCTCCCCTGTGTTTGAGGGCTTGTATCATCATCAAGACGTCGTTGATGATGAAAAAGAGACCTCTACAATCCACA TGGAAGACATGTCACAACAATCCTGCAAGGCCCTTCTGAGCTACTTGTACGGCACAATAAAACATGAAGATTTCTGGAAG CACAGGCTTGCGTTGCTCGGAGCAGCCAATAAATTCGAAATTGGTGATCTCAAAGATGCTTGTGAGGAAAGCCTGCTGGA TGATCTTACCTCAGGAAATGTTCTCAGCAGGCTAAATGAGGCTTGGCTGTACCAGTTGCCCAAGTTAAAGAAAGGATGTT TCACATTCTTATTTGACTTTGGCAAGATATATGATGTTAGAGAGGAAATAAACAACTTTTTTCTCCTTGCGGAGAGGGAG CTGATGATGGAGATGTTTCAGGAAGTGCTTACTGTTTGGAAATAG
Protein sequence (LotjaGi1g1v0158600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLDEEIHADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQSCKALLSYLYGTIKHEDFWK HRLALLGAANKFEIGDLKDACEESLLDDLTSGNVLSRLNEAWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERE LMMEMFQEVLTVWK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 174 | 174 | 1.3E-90 | – | |
| Gene3D | 1 | 138 | 138 | 2.7E-29 | – | |
| PANTHER | 1 | 174 | 174 | 1.3E-90 | – | |
| SUPERFAMILY | 1 | 107 | 107 | 8.48E-18 | ||
| Pfam | 3 | 106 | 104 | 2.4E-20 | ||
| CDD | 7 | 92 | 86 | 1.72519E-14 | – | |
| ProSiteProfiles | 8 | 70 | 63 | 14.791 | ||
| SMART | 8 | 109 | 102 | 1.5E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0158600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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