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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0191100 |
| Transcript ID | LotjaGi1g1v0191100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heparanase; TAIR: AT5G07830.1 glucuronidase 2; Swiss-Prot: sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1; TrEMBL-Plants: tr|K7KKK3|K7KKK3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0191100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:37657384..37661904) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGATTCCACCTCGCATTGATACTCGTTTTGGCTTCTCTTCGACTAACTTTAAGTGAAGATATCGAGCATGGTTCGCT GCTCGTAAATGGAGCTCAAGCAAAAGCTGAAACAGGGGATAACTTTATTTGTGCCACCATTGATTGGTGGCCTCACGATA AGTGTGACTACAACCATTGCCCCTGGGGATATTCATCTGTTGTAAATTTGGTGAGTATTTTGGAATTAGTTTGTATTGAA ATGAACACTCTTGAGAATTTATATTTCCCTTCCACCCCCCCCCCCCCCAAATCCTCCATTTAGAACTCTAGCAAGCAGAG TCAACCAGTTTTAGTAATTGTTCAATTCAATGTGGATTGATTTTTCAGGACTTGTCTCATCCTTTCCTTGCCAAAGCAAT CCAAGGTGTGTATATTTGAATTACTTAGGTCCATATGGTTTAGAAGATCAATGACTCTGATAGCATTCTTTTTTTTTTGT GGCTGCATAAAAGTTACAATGAGCCTATTTGAATGCGGACCAAAGAGCACTTATAGGAGCTTATCTTATAAAAAAGACAC AGGATAAGCTCCAATAAGTGCTCTATCAAATCATCTTTGGAATGCTTTGTTAAGCATGATAGTATTGTTTTCATGATAGC ATTCAAGCCGTTGAGGATAAGACTTGGAGGTTCTTTGCAAGACCAGGTGCTGTATGATGTAGGAAGTTTGAAGTATCCTT GTCATCTATTTCAAAAGATGAAAGGTGGACTGTTTGGATTTTCAAAGGGATGTTTACACATGGAAAGGTGGGATGAGCTG AATCAATTTTTCAATGAAACAGGGTGAGAATTTTAACATTGAAATTCTTATTATCCCCAGCGCCTCCCTCTTCCTTCAAG CCAAATAAAAAACATGAAAAAATAAAATTTGGTTTTTAATTAGGGTACTATAACCAAGTGATAGTTTTCATTTGTTATTT TTTTTTTGTGCTTCCTCTAGTATAATCCAGCTTTACATCCCTTCATTGGAGGTATAATAGGTTCTCTAGCTGCATATACT TAATACCTTTTTCACCCTTGATAAAAAAAACATGCAAATAGAATGATATATAGTTTTATTGTATTCCTTTTTCCTTATAA TCACAGACATAAGGTGCTTTGTTTATTGTTATCATTTAAGTTCATCATTCTAGTCCTTCTATCTTTCATGATTGGTTAAT ATTAGCAATAGCTTTTGTTAGAGTGAATACCGCTGTGGTCCATCCAGGCTTTGACCTATAAATACTTGCAAACCTCTTTT TCTATAAGAAAATACAAAAAAAAAGAATTTGAATGCCTGTGTGTGCATGATTTACTATACTATCTCTATGTATGGTTTAG CATAAGCATATTTATGTTCAAGAAATCAAAGTGGGGTGGTGGAGGGATGATTATCTGTGATGTAACTTAATTAGAATTTG ACACTTGCAGGGCCATTGTGACATTTGGCTTGAACGCGCTCCACGGGAGGCACCAGATTAGTCATAATGTTTGGGAAGGA ACCTGGGACCCTACTAATACTTATGATTTTATAAAGTACACTATTTCAAAAGGATACAAGATTGATTCCTGGGAACTTGG TAGGACACTAGATAGAGTTATTTGTTACTTTGATGCTCATTTATGTTTAATTTGACCTTATTCTTGCATATGCTGCTTGT AGGCAATGAGTTGAGTGGTAAGGGCATTGGTGCAAGTGTTGCTGTCGCACAGTATGGTAAAGACGTGATAAAACTTAAAC AAATTCTAGATGTTTTATATGAGAGCTCCAAGTTCAAACCTTCACTTGTAGCACCTGGGGGATTTTATGAAAAGGAGTGG TATGACAAACTTCTTCAGGTTTCGGGTTCAGGCATAATCAATGTTCTAAGTCATCATTTATATAATTTGGGCCCAGGTTT GCTTGTCATACATGATTCTTTATACTATAGTTTGGTAAATTAATCTGTTCCTAATTTAATCTCTCTTTTTCAGGTAGTGA TGAGCATCTTGAAAGGAAGATTTTAGATCCTGAGCGCTTGAGCAAGGTTGAAAATATTTTCAGCAATCTTTCAGCAACCA TTCAAAAACATGGTCCTTGGACTTCTGCATGGGTAGGAGAAGCTGGTGGGGCATACAACAGTGGTGGCCGCTTTGTTTCT AACACATTTCTGAACAGCTTTTGGTAATACTGGTTGTTCATTCCCTCCATCATTTTCTGCTCATATTTTTTAATTGCTAA GAAGCATTTATGATTTTTTAATTAGCAAAATGATTACTTGTGTTTAACTTTTAAGTTGGAAAATTTAAACGACTCATATC ATAGGTACTTAGATCAACTTGGAATTGCATCCAGCTACGGGACTAAAGTTTACTGCAGACAGACTTTAATTGGAGGAAAC TATGGCCTTCTCAATACCACCACCCTCACTCCCAATCCTGACTACTACAGGCAAGTATAAATTAAAAATTGAAGAGAGAA AGAGACTAGATATATGTACTTTTTATTTTCATTATAGGGTACTTGAAGATTTATGGTGGTTCGTATATCTTTGTTGAACA TATCTGTTGCAAACCCAAGCATTAGGCCCAGGTTTGGTAAAGTCTATGAGAGGAGGCCCAAACAGCAAGATGGACCACAT GATGATTCAACATTCTAGAAGCTAATATTCCCTAGTACTATCTGGTGAGGTGGCAGCATCCTATGATGAGGAGGGGACCA TTGCTACCAGCTGATAGAATATAAGTTAGTTATGGAGAGAGAGAGTCTTTTTAGGCAGAATTTGGCATAGGACTTGGGAG AGAAAGAGCACTCTCGAAATTGCTCTTGCTTATCTTGTTTTTCTTTCTGTTATTTTGTAATTCCTTAAACACTGTTTCTG GGTATTTCCAGAGGATTCAGTGATCATCAATCTCAGTTTCATTCAGTCATAGTGTTGTTATTCTGGTACCTAACATTATC TAATCCTAGACTCTCATCTTTTTTTCCCGATAGTGCACTTTTGTGGCATCGGCTGATGGGAAAGAAGGTTCTTGCAGTTT CAAATGATATTTCTTCACCCTTTTTACGCACTTATGCCCATTGTTCAAAAGACAGCGTAAGTGCACTAATTTATTTCTAC TTGTATGGAAAATATAATGTTATAGGGAGACGTGAATTTGGAGTTCACTCTTATGTATATGATGTTTGATTAGCATTCCA ATTATTAAGAAATTAAAGCTGATATGACATCATATGCAGCTTAACATGCTGATATATTATATGTAAATTTGACAGTAAGA AAAAAGAATATGCAGTGGTTAGAAACTTAGAATGCACTGAAGTTTATGGAAGAATGAATTTTAGATTTGTTCATAGGAGA GCCAAGGTGAATATAACACTGAATGATTTTATGAACATTTCACCATACTTCTGTGGTCATGCTAGAAGTTTTGGTCTCAT GCCTAATCAATTAGGGTTTTCCATTTGGCTTCTAGGTGCCTGGTATTTTGGTACAATGTTGACATAGAGATTTGAGCCTA CGATCCATGCAGTTAGCCAAATCCCTCTTCTTTTTCATCAGAATAAATTTTGGTACCCACAAAAGCTTTTTTCCATAATT GATTTTGACTTTAGAATTAATTAGGTGTTTGTTTGTTGTAGACCTGTAGTTAGATAATCAATGGGATGAAAAACGAAAAT TACTCATAAAATAGCAAAATACATATAGCACAAACAAACAGTGAACCAGATAGCTTGTGTCCAGTCTAATTTAAGCTGTT ACTATAAAAACTGAAATTGGATTCAAATCTTCACATATTACATTCTATCTAATCAGACTTCCTTGTTGTCCCAGAATATA TATCTCTTGATTTGTAGATCTTTTAGAGTTTTTGACATTATATTCCGTTTTGTTTGATAATGAATGTGTGAAAACTTCGA ACAAAGGTTGATTTTGTGTCACTCACTTCCAATTTGCTAGCAACTCTTTTAATTAAAGTGAAATTTGCAGGGAGTTGAGC TTCACATCTTGTGACTTAAGATTAGATGATAGCCATCTATCTAAACAATTGTCTGCTCTCTGAATATTTCTTTTAGCATT CATCAGATTCTTATCAATTTCATTCTACAGGTGGGTGTAACGTTACTGTTGATCAACTTGAGCAACCAGACTAATTTCAT ACTCAATGTTCAAAACCCTGTGACAGCAAGTGCTGAAGGAAATGCAGTGACCAAAAGCACCCATAAAGGAAACTCATTCT TTGACCATCTTAAGAGGACATTTTCTTGGGTTGGAACAAAAGGATCAGAAGTAACATACAGGGAAGAGTATCACCTAACT TCACATGATGACATCATTAGAAGCCAAACCATGGTACTGAACGGTATTCCACTGGAGTTAACAAGTGAGGGAAATTTTCC ACCATTGGATCCAGTACGCAGTAATGTACTATCTCCAATATACATGGCTCCTTTGTCCATTGCATTTATTGTTTATCCTA ACTTTGATGCTCCAGCATGTGCTAGACACAGAAAACTTTAG
CDS sequence (LotjaGi1g1v0191100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATTCCACCTCGCATTGATACTCGTTTTGGCTTCTCTTCGACTAACTTTAAGTGAAGATATCGAGCATGGTTCGCT GCTCGTAAATGGAGCTCAAGCAAAAGCTGAAACAGGGGATAACTTTATTTGTGCCACCATTGATTGGTGGCCTCACGATA AGTGTGACTACAACCATTGCCCCTGGGGATATTCATCTGTTGTAAATTTGGACTTGTCTCATCCTTTCCTTGCCAAAGCA ATCCAAGCATTCAAGCCGTTGAGGATAAGACTTGGAGGTTCTTTGCAAGACCAGGTGCTGTATGATGTAGGAAGTTTGAA GTATCCTTGTCATCTATTTCAAAAGATGAAAGGTGGACTGTTTGGATTTTCAAAGGGATGTTTACACATGGAAAGGTGGG ATGAGCTGAATCAATTTTTCAATGAAACAGGGGCCATTGTGACATTTGGCTTGAACGCGCTCCACGGGAGGCACCAGATT AGTCATAATGTTTGGGAAGGAACCTGGGACCCTACTAATACTTATGATTTTATAAAGTACACTATTTCAAAAGGATACAA GATTGATTCCTGGGAACTTGGCAATGAGTTGAGTGGTAAGGGCATTGGTGCAAGTGTTGCTGTCGCACAGTATGGTAAAG ACGTGATAAAACTTAAACAAATTCTAGATGTTTTATATGAGAGCTCCAAGTTCAAACCTTCACTTGTAGCACCTGGGGGA TTTTATGAAAAGGAGTGGTATGACAAACTTCTTCAGGTTTCGGGTTCAGGCATAATCAATGTTCTAAGTCATCATTTATA TAATTTGGGCCCAGGTAGTGATGAGCATCTTGAAAGGAAGATTTTAGATCCTGAGCGCTTGAGCAAGGTTGAAAATATTT TCAGCAATCTTTCAGCAACCATTCAAAAACATGGTCCTTGGACTTCTGCATGGGTAGGAGAAGCTGGTGGGGCATACAAC AGTGGTGGCCGCTTTGTTTCTAACACATTTCTGAACAGCTTTTGGTACTTAGATCAACTTGGAATTGCATCCAGCTACGG GACTAAAGTTTACTGCAGACAGACTTTAATTGGAGGAAACTATGGCCTTCTCAATACCACCACCCTCACTCCCAATCCTG ACTACTACAGTGCACTTTTGTGGCATCGGCTGATGGGAAAGAAGGTTCTTGCAGTTTCAAATGATATTTCTTCACCCTTT TTACGCACTTATGCCCATTGTTCAAAAGACAGCGTGGGTGTAACGTTACTGTTGATCAACTTGAGCAACCAGACTAATTT CATACTCAATGTTCAAAACCCTGTGACAGCAAGTGCTGAAGGAAATGCAGTGACCAAAAGCACCCATAAAGGAAACTCAT TCTTTGACCATCTTAAGAGGACATTTTCTTGGGTTGGAACAAAAGGATCAGAAGTAACATACAGGGAAGAGTATCACCTA ACTTCACATGATGACATCATTAGAAGCCAAACCATGGTACTGAACGGTATTCCACTGGAGTTAACAAGTGAGGGAAATTT TCCACCATTGGATCCAGTACGCAGTAATGTACTATCTCCAATATACATGGCTCCTTTGTCCATTGCATTTATTGTTTATC CTAACTTTGATGCTCCAGCATGTGCTAGACACAGAAAACTTTAG
Protein sequence (LotjaGi1g1v0191100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFHLALILVLASLRLTLSEDIEHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKA IQAFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQFFNETGAIVTFGLNALHGRHQI SHNVWEGTWDPTNTYDFIKYTISKGYKIDSWELGNELSGKGIGASVAVAQYGKDVIKLKQILDVLYESSKFKPSLVAPGG FYEKEWYDKLLQVSGSGIINVLSHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGAYN SGGRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIGGNYGLLNTTTLTPNPDYYSALLWHRLMGKKVLAVSNDISSPF LRTYAHCSKDSVGVTLLLINLSNQTNFILNVQNPVTASAEGNAVTKSTHKGNSFFDHLKRTFSWVGTKGSEVTYREEYHL TSHDDIIRSQTMVLNGIPLELTSEGNFPPLDPVRSNVLSPIYMAPLSIAFIVYPNFDAPACARHRKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| PANTHER | 1 | 546 | 546 | 0.0 | – | |
| PANTHER | 1 | 546 | 546 | 0.0 | – | |
| Phobius | 3 | 14 | 12 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 547 | 528 | - | – | |
| Pfam | 26 | 341 | 316 | 2.0E-155 | ||
| SUPERFAMILY | 40 | 385 | 346 | 6.45E-51 | ||
| Gene3D | 65 | 383 | 319 | 3.0E-60 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Hydrolase activity, acting on glycosyl bonds | Catalysis of the hydrolysis of any glycosyl bond. |
Expression pattern of LotjaGi1g1v0191100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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