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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005199
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.327s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v0609680.1
n.a. PREDICTED: heparanase-like protein 2-like [Glycine max] gi|356502592|ref|XP_003520102.1| chr2 8248773 8252019 +
3 domain predictions
2 GO terms
Lj4g3v1683270.1
n.a. PREDICTED: heparanase-like protein 1-like [Glycine max] gi|356562599|ref|XP_003549557.1| chr4 24449292 24453748 +
3 domain predictions
2 GO terms
Lj4g3v1946680.1
n.a. PREDICTED: heparanase-like protein 3-like [Glycine max] gi|356548541|ref|XP_003542659.1| chr4 27241280 27244528 -
3 domain predictions
2 GO terms
Lj4g3v1946680.2
n.a. PREDICTED: heparanase-like protein 3-like [Glycine max] gi|356548541|ref|XP_003542659.1| chr4 27241280 27245208 -
3 domain predictions
2 GO terms
Lj4g3v2298190.1
n.a. PREDICTED: heparanase-like protein 3-like [Cicer arietinum] gi|502087386|ref|XP_004488517.1| chr4 32089013 32090238 -
2 domain predictions
2 GO terms
Lj4g3v2298200.1
n.a. PREDICTED: heparanase-like protein 3-like [Cicer arietinum] gi|502087386|ref|XP_004488517.1| chr4 32090995 32092454 -
3 domain predictions
2 GO terms
Lj6g3v1093320.1
n.a. PREDICTED: heparanase-like protein 3-like [Cicer arietinum] gi|502087386|ref|XP_004488517.1| chr6 13325594 13328666 +
3 domain predictions
2 GO terms
LotjaGi1g1v0191100.1
n.a. Heparanase; TAIR: AT5G07830.1 glucuronidase 2; Swiss-Prot: sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1; TrEMBL-Plants: tr|K7KW31|K7KW31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0191100 LjG1.1_chr1 37656926 37663111 -
2 domain predictions
2 GO terms
LotjaGi1g1v0191100.2
n.a. Heparanase; TAIR: AT5G07830.1 glucuronidase 2; Swiss-Prot: sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1; TrEMBL-Plants: tr|K7KKK3|K7KKK3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0191100 LjG1.1_chr1 37657194 37663102 -
2 domain predictions
2 GO terms
LotjaGi1g1v0191100.3
n.a. Heparanase; TAIR: AT5G07830.1 glucuronidase 2; Swiss-Prot: sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1; TrEMBL-Plants: tr|K7KKK3|K7KKK3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0191100 LjG1.1_chr1 37657209 37662811 -
2 domain predictions
2 GO terms
LotjaGi1g1v0191100.4
n.a. Heparanase; TAIR: AT5G07830.1 glucuronidase 2; Swiss-Prot: sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1; TrEMBL-Plants: tr|K7KKK3|K7KKK3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0191100 LjG1.1_chr1 37657384 37661904 -
2 domain predictions
2 GO terms
LotjaGi2g1v0179600.1
n.a. Heparanase, putative; TAIR: AT5G07830.1 glucuronidase 2; Swiss-Prot: sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1; TrEMBL-Plants: tr|A0A151RNL3|A0A151RNL3_CAJCA Heparanase-like protein 2; Found in the gene: LotjaGi2g1v0179600 LjG1.1_chr2 60127162 60130580 +
2 domain predictions
2 GO terms
LotjaGi2g1v0298800_LC.1
n.a. Heparanase, putative; TAIR: AT5G61250.1 glucuronidase 1; Swiss-Prot: sp|Q8L608|HPSE2_ARATH Heparanase-like protein 2; TrEMBL-Plants: tr|A0A151RNL3|A0A151RNL3_CAJCA Heparanase-like protein 2; Found in the gene: LotjaGi2g1v0298800_LC LjG1.1_chr2 77324514 77325242 -
2 domain predictions
2 GO terms
LotjaGi4g1v0253000.1
n.a. Heparanase; TAIR: AT5G07830.1 glucuronidase 2; Swiss-Prot: sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1; TrEMBL-Plants: tr|K7MKF8|K7MKF8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0253000 LjG1.1_chr4 60684968 60690190 +
2 domain predictions
2 GO terms
LotjaGi4g1v0253000.2
n.a. Heparanase; TAIR: AT5G07830.1 glucuronidase 2; Swiss-Prot: sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1; TrEMBL-Plants: tr|K7MKF8|K7MKF8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0253000 LjG1.1_chr4 60685076 60689851 +
2 domain predictions
2 GO terms
LotjaGi4g1v0280000.1
n.a. Heparanase, putative; TAIR: AT5G34940.2 glucuronidase 3; Swiss-Prot: sp|Q9FZP1|HPSE3_ARATH Heparanase-like protein 3; TrEMBL-Plants: tr|A0A151SRG6|A0A151SRG6_CAJCA Heparanase-like protein 3; Found in the gene: LotjaGi4g1v0280000 LjG1.1_chr4 65102213 65115440 -
2 domain predictions
2 GO terms
LotjaGi6g1v0210100.1
n.a. Heparanase, putative; TAIR: AT5G34940.2 glucuronidase 3; Swiss-Prot: sp|Q9FZP1|HPSE3_ARATH Heparanase-like protein 3; TrEMBL-Plants: tr|I3SJ46|I3SJ46_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0210100 LjG1.1_chr6 50761140 50764835 +
2 domain predictions
2 GO terms