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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0217700 |
| Transcript ID | LotjaGi1g1v0217700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kelch repeat-containing protein; TAIR: AT1G74510.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q9CA63|FBK29_ARATH F-box/kelch-repeat protein At1g74510; TrEMBL-Plants: tr|A0A0S3RG77|A0A0S3RG77_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0217700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:48192944..48198907) extracted from Lotus japonicus Gifu genome v1.2.
ACCGATTGTTGTATTGACAACACAAACACAAATGACACATTTCGCCACAGGAACAACAACATCGAACATAACCAGAAACC AAGTGGCACACACACACGCGGAGAGAGAGGTGCTGGTCTTTGCGTGATTTTGCTGACGCTAGAGAAACCGCATGAAACCC ATTACTTCTTCGATTCTCTTCAATCTAAATTCGTAAGCTTTTCTTCTTCTTCTTCTTCTATCTCCTTGTTTTGTCTCCTC CTTCTTTGGAACCGGTGCTTCAATTCATGGGTATTGGTTTTCACCTCTTACTTGCCTTGCCATTTTTTTTCTTTATTGTT ACATTCTTGTGATTGAAAATGGGAAAATGGGTTATATGTCATATGAGATTGCTGCCAATGTAAATAATAAGTGATCTTCT TTTTTTTTTTTCTTCTGTTGATTTGTTGTTGATGATTTTGGATTTGGACCTGTTATTTTGATACTAGTTTCAGTTTTTCA TTTCTGATCTGATTAGTTCTAAAAAGTTTCCCTTTTTAATTTTTTCTCCTTAGATCTGATTTTTGGATATCTGGTTATAA CTTTCTGTTGGAGTGAGTTTGATTATCGTGTGTGTTTGGTTGTTGCTACCACTTACATGTTCAAGTCGTGTTTCTGATCT TTGTGCTTGTGCTAAATTATGTTCCAAATCATGACTGACCAAGAGGGTGTCTGTGGTTAAGCATGCATTTTCAGCTAATG GGTGAAGATTGTTCATGTCTTTTAGCATATTCGGATCCGCTTGTTTTCTCAGAATCAATTTTGGCACCCAGAAGCTACTC ACATAAGCTTCTTCCCAGAATTGATTTTGACTATAGAATAAATTCTTGAAGGATTTTCAACCATGCACTTTGTTCGATGA TGTTTTATACCGTATACTTTGGGGTACATGTAAATTTGATGCTTTTGATTTTATGATTTTAGCCAATTTGCTCAAAGCTG GAATATGGTTGTATAAGCAATTTTTATGATTGATTTTTTATGTTATTTATTTTTGGATTGGAGTTAAGACTTTCCTTTGT ATCCAGATTGATTCTTTCCATTGACATGTTGGAGGGTCCATCGTTTCTCGTTTCAAGGGACTTACCAAGCTCATGTGAGC AAGAGACAGAGTGGATTTACAATACTTGCCGTGTGATGGAGCTCACGAACAATAAGCGTCGACTGGAACTAGAGGAAGAA GCTGTGTTGAGAAAGTCATGCAAGCTTTCAGATGCTGCTGAGGAACAAGAAACAAGGAAGAATTTCCTTGAGCTTTCCCT TTCCCTCAACCAATCGAATGACCAAAACCGTGCAGGTGATCAATCAGACTCAAGTTCTCTTATCCACCAATTAGGCCGGG ACATAACAATTAACTGTCTCCTACGATGCTCGAGATCTGATTACGGTTCGATTGCCTCGTTGAACCAGAGTTTTCGTTCT CTCATCCGGAGTGGAGAGCTTTATCGGCTGAGGCGGCAAATGGGTATCATAGAACACTGGGTTTACTTCTCTTGCAATCT TCCTGAATGGGAGGCATTTGATCCGAACAGCGGCAGGTGGATGCGCTTGCCGAGAATGCCTTCTAATGAATGTTTTATCT GTTCTGATAAGGAGTCACTGGCTGTTGGGACAGAGCTTCTTGTTTTTGGAAAGGAAATTATGTCTCCTGTCATTTACAGA TATAGCATTCTGATGAACTCATGGTCATCTGGTATGGAAATGAACATCCCTAGATGCTTGTTCGGTTCCGCCAGCCTTGG AGAAGTCGCCATATTAGCCGGCGGTTGTGACCCACACGGCAACATCTTGAGCTCTGCTGAGCTTTATAACTCAGAAACTG GAACCTGGGAGATTCTTCCAAACATGAATAAAGCAAGAAAGATGTGTTCTGGTGTGTTTTTAGATGGGAAATTTTATGTC ATAGGTGGGATTGGGATAGGTTGCTCAAAGCAGTTAACATCCGGTGAGGAGTTTGATCTGCAGACGAGAAAATGGCGTGA AATTCCCAACATGTTCCCGAGGAGAAATGGAGGATCTGGGGTGACTGAGTTACCACCTGCCGCAGAGGCACCTCCTTTGG TTGCAGTTGTAAATAATGTACTTTATGCTGCAGATTATGCACTGCAAGAGGTGAGGAGATACTATATAGAAAATAACTCA TGGGTTACTATTGGAAGATTACCGGAGCGGATAGTCTCGATGAATGGCTGGGGATTAGCCTTTCGAGCTTGTGGGAATCG CCTAATTGTTATTGGCGGTCCAAGAGCCTTGGATGGAAGGGTGATCGAAGTTAATGCTTGTGTCCCCGGCGAAGGTGAAC CAGAGTGGAACCTGCTAGCCAGCCGGCAATCCGGGAGCTTCGTGTATAATTGTGCGGTGATGGGATGCTGAGGCATTTCC ATTTGGTGAATAATGCTTTGTGAATTTCCCGAGTCAAACTAACGGTCTTCGGTTCTTCACTTGGATTCTGGCTCATGGGT GATTTCAGCTTACTTCCTGGGGTAAATTTTTACTCCTATTTAAAGTAAAAGATACAGTTTTAGTGCATGTTGGGTTGCAA TGACCAATTTCATAAGTTCAGTTGAAGCATTGCAGAATTGTAATTTGTCTCAGTTTTCGTCGTCTTTACCTTTTATTTCA CCTTAAAACATAGGTTTCACAAACCCTGTTTGCATTGGTCATTATCTCACTTCGCAAAAAAATCAGCAGAGACAGACAGA AATTAGAATAACCTATTTCTCCTTGTCTTTGTACTTTATTTTATTATGTCTTCATTGTTTCAGATAACTGTTTTTAAGTG CATCATCCAAGCTGTATCATTCTGTTTGTCTAGATCAGGTTGTTCATGTTTCTGTTCTGGTATATCTAGGTGAATCAATG AGAATGCTTTTGATCTGATTAACCATAAAGGACCTTGGAAACCATGAGATATAGAAAACAAACAAGGAGATTTTGTGAAT TATAATTTACTTTTCTTGACATCAATTATCAATGTAAGTGCTGATAAAGTTTGCATTCAATAATTGCAGCTTTCAAAGAT ATAAAGCAGAACAAGGTGTCTGCTTTGGAATATGAAAGGATTCAAATTATTTATGTAATTCTAGAATTTGTATGAAATAT TGAGGCTTTTTCTGTTATTTATTGATTGTGTTTTAGAACTGATAATCAAGTTTGAGTCGATATGGTTGAATTTCAATAAC TAATCTAGAACACTAGGTGGTTTGTTGCAAATAAGTGTTAAATGCAGTTAACTATTTTAAAATTCAGCAATCAAAGCATG CAGTTTATAGTATCAACCTGCATAAAGTTATTTAAATGGGTGATTGAACTTGTATTGCTTATCAGAAAATACATGACTTC ACATCTTCTTTGAGGTAGTAACTAGTACTACATGAGATATATTTTGTTTCTTTGAATGATGCGTTTCTTCATTATGTATA ACCTGTTATGCTTTTGGATTTTGCACTCAGGGTATCCATAATTCAGTAAAGTCACAAGTACAGGTTCATAGCCATCTGAT CTGATCATAATCATACGGTCTAGAGAAACTATTTGAAGTGCATAGTAACCTCTTTAAATCCTAACCTATTGATATTGATC GGAACCGGATGGTGGTGAACCCATGACTTCACCGAATGTGGGTTTTACTTACTGCAGGGAATCCGGGTCTGAAATTTTCA TGCTCAATGCCCTATAACATTAGTAGGATTAGATGTCTGAAACCAGAAAGGGCTGGTGGATTATGTTTCTTGATTCTTGT GATTAGATCCTTGTCTTCATCAGAGTGGTAATATGCTTATCAATCATGATATTCATTTCTTTGGTGAATGTTAGTCTATT GTGCATATTGGAAAGTCTTTTTCGTAAGCTTAGTAGTGATTACAATAACACAAGAATACAATAGCTGCCTCGAGATCTCT TGTCAAAACTGGGTCTGTTGGTTTGTGTAAGTTGTGGTCCTTGAAAAAGTTATTTCTTTCATCAGCCTTTGCTGTTATAG ATTTCAAATTCTGTAGAATTTTTTCTAATACGAACTTGGAAGTTCTTGATCTGCTCAATTAGCCTATCTAGCTTATCCTT TAATTTATCATTGATTGTTTATTTTGTGTTTGGGTAAACATGTTAATCAAACATTTAATAAGCTCTTATCTATACAGTTA TTTGAGAAGCTATTGAAATACTCTCAAAGTAACTTAAAAGGCTCTATTTGAAAGTGTTTATTTGAGTTTATCTTATAGCA TAAGCGCTTTTACAATGTTTCTGAGAGTTTATGTAAATAGTTTATGGTCTACCTATAAGTTGATTTGAGCTTATATTCGT AACTTGTTATTAGCTTATGAATTAGAGTTTATATTTACTTGTAAATTATATTCAACTTATTTCAATAAGTTTCTCAAATT AGTTTATAAGTAAACACTTATTTTCAAATTAGTTTATAAATTAACACTTATGTGCTAAGATTAAGCATAAGTGAAATCAA ATGATACTTACAAATTAAGGGAATCAAACTTTAAAGAGAGTACTGTAGCATAGCATGACAAATAAACACTACAGCCTAAG TTAGCATGTTCTAATGCACTAGAGACGCAGTAAATCCAAAACAGGAAAAAAAATACAATCAAACATGGTAAAGTTACTTG TTTTCCCTTTTGTCCTTGGTTGGCTAATGGGTTGGGCTGAGTAGCACTAGCAGTTACTCAGTTAGTTACAAAGTAATGAA AACAATCTTTGTTGGAGACAACCTGGTAAGTACAGTAACATGAAAAGAAAAGAAACAGATGGTGATGTGTGGCTGTGAGG TAGTAACATGAGAAAACTGTTATTGTGGTGGTCACGTGGGTTGATGGCATCTAGTGCTTCGCTTTGCTGGAACTTTTTCT CTCCTATCTATCTATCGCACATGCCTTTCGTATTTTGTACTTGACTTTTTTGGGACATGGAGTTTTAGATTTTGTCCAGG CTGATTCAGATTTCTTATATCAGGAACATATATAAAACACCAAGACTATGAAAATTTCACAAGAGAAAGAAAGAAAGAAA AAAGGTAAATTTGGGAAGATAAAGCGATTGGCATAACAATCAGGTTAGGTCCCCCTATATCCTAGGGTTGTTCAAAGGGA ACCAGACCGATTTGGAATTGAAAAAACCAAGACATTTTTCTAAAGTTGAGCCGGTCGGACCAGTTGGCGAATCATGCGGT TGAAGAAAAACAGTTTATTAAGGTTTGGTTCGGTCGGTCTCAGTTTATTAAGGTTTCAATTCTCCCACCATGGCTACAAC CCCATCTCATTTCTTTTCTTTGTCACTTTGCCGCAATAACCTCCACACAAAGATGTCTTCCCTTCCATTGCCTTTATTGT CTTCATCATCGACGTCACAACCATCAACACCGTCATCACCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTTCCTGTTGACGTCGCCCGCAGATGCCTTCTCATCGATGTTGCTCGCAGATCTCTTCTCATCGACGTCGTCCACCACCA TCGTCTTCATCATTGATAGGGATGGCAATGGGTAGGGTACTATAATACTCATTTCCATACTCGCGTTTTCAAAAAGTACC CATACCCGTTCCCTTACCCGCTTGAGTAGCAACATGATTGCCCGTGCCCTTACCCTCTGGGTGCCTATATGTCCATACTC GTAGAAGACAAGCCAAGTCAAAGGAGTCAACCAAAGGACAAAGAGTCAAACCAGACGACAGAGTAAAGAAGAAAGTCATA CATGCTTCATCGTCTATCCAAGAAGGTCAGTCAAAGCATCAAGGTAGACTACACAAGAAAAGGAATGTTTTATCTACTAA ATAGTATGATCTGAAGAACAAGCGAAGAATGATCAAGAGCTACAACGCTAAAACGCTAGAAAAGGAAAGCCATATCTGCT AGAACGTCTATTAGGAGAAAGTAATCAAGCTGAAGAGATCAAGA
CDS sequence (LotjaGi1g1v0217700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACCCATTACTTCTTCGATTCTCTTCAATCTAAATTCATTGATTCTTTCCATTGACATGTTGGAGGGTCCATCGTT TCTCGTTTCAAGGGACTTACCAAGCTCATGTGAGCAAGAGACAGAGTGGATTTACAATACTTGCCGTGTGATGGAGCTCA CGAACAATAAGCGTCGACTGGAACTAGAGGAAGAAGCTGTGTTGAGAAAGTCATGCAAGCTTTCAGATGCTGCTGAGGAA CAAGAAACAAGGAAGAATTTCCTTGAGCTTTCCCTTTCCCTCAACCAATCGAATGACCAAAACCGTGCAGGTGATCAATC AGACTCAAGTTCTCTTATCCACCAATTAGGCCGGGACATAACAATTAACTGTCTCCTACGATGCTCGAGATCTGATTACG GTTCGATTGCCTCGTTGAACCAGAGTTTTCGTTCTCTCATCCGGAGTGGAGAGCTTTATCGGCTGAGGCGGCAAATGGGT ATCATAGAACACTGGGTTTACTTCTCTTGCAATCTTCCTGAATGGGAGGCATTTGATCCGAACAGCGGCAGGTGGATGCG CTTGCCGAGAATGCCTTCTAATGAATGTTTTATCTGTTCTGATAAGGAGTCACTGGCTGTTGGGACAGAGCTTCTTGTTT TTGGAAAGGAAATTATGTCTCCTGTCATTTACAGATATAGCATTCTGATGAACTCATGGTCATCTGGTATGGAAATGAAC ATCCCTAGATGCTTGTTCGGTTCCGCCAGCCTTGGAGAAGTCGCCATATTAGCCGGCGGTTGTGACCCACACGGCAACAT CTTGAGCTCTGCTGAGCTTTATAACTCAGAAACTGGAACCTGGGAGATTCTTCCAAACATGAATAAAGCAAGAAAGATGT GTTCTGGTGTGTTTTTAGATGGGAAATTTTATGTCATAGGTGGGATTGGGATAGGTTGCTCAAAGCAGTTAACATCCGGT GAGGAGTTTGATCTGCAGACGAGAAAATGGCGTGAAATTCCCAACATGTTCCCGAGGAGAAATGGAGGATCTGGGGTGAC TGAGTTACCACCTGCCGCAGAGGCACCTCCTTTGGTTGCAGTTGTAAATAATGTACTTTATGCTGCAGATTATGCACTGC AAGAGGTGAGGAGATACTATATAGAAAATAACTCATGGGTTACTATTGGAAGATTACCGGAGCGGATAGTCTCGATGAAT GGCTGGGGATTAGCCTTTCGAGCTTGTGGGAATCGCCTAATTGTTATTGGCGGTCCAAGAGCCTTGGATGGAAGGGTGAT CGAAGTTAATGCTTGTGTCCCCGGCGAAGGTGAACCAGAGTGGAACCTGCTAGCCAGCCGGCAATCCGGGAGCTTCGTGT ATAATTGTGCGGTGATGGGATGCTGA
Protein sequence (LotjaGi1g1v0217700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKPITSSILFNLNSLILSIDMLEGPSFLVSRDLPSSCEQETEWIYNTCRVMELTNNKRRLELEEEAVLRKSCKLSDAAEE QETRKNFLELSLSLNQSNDQNRAGDQSDSSSLIHQLGRDITINCLLRCSRSDYGSIASLNQSFRSLIRSGELYRLRRQMG IIEHWVYFSCNLPEWEAFDPNSGRWMRLPRMPSNECFICSDKESLAVGTELLVFGKEIMSPVIYRYSILMNSWSSGMEMN IPRCLFGSASLGEVAILAGGCDPHGNILSSAELYNSETGTWEILPNMNKARKMCSGVFLDGKFYVIGGIGIGCSKQLTSG EEFDLQTRKWREIPNMFPRRNGGSGVTELPPAAEAPPLVAVVNNVLYAADYALQEVRRYYIENNSWVTIGRLPERIVSMN GWGLAFRACGNRLIVIGGPRALDGRVIEVNACVPGEGEPEWNLLASRQSGSFVYNCAVMGC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 21 | 461 | 441 | 3.3E-227 | – | |
| PANTHER | 21 | 461 | 441 | 3.3E-227 | – | |
| Coils | 50 | 70 | 21 | - | – | |
| Gene3D | 166 | 455 | 290 | 1.6E-42 | ||
| SUPERFAMILY | 170 | 458 | 289 | 6.02E-48 | ||
| Pfam | 242 | 288 | 47 | 1.1E-10 | ||
| SMART | 254 | 301 | 48 | 1.5E-7 | ||
| Pfam | 290 | 336 | 47 | 2.8E-8 | ||
| SMART | 302 | 349 | 48 | 0.23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0217700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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