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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0241200 |
| Transcript ID | LotjaGi1g1v0241200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose 6-phosphate phosphatase; TAIR: AT5G10100.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|F4KFG5|TPPI_ARATH Probable trehalose-phosphate phosphatase I; TrEMBL-Plants: tr|A0A0B2QIN7|A0A0B2QIN7_GLYSO Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi1g1v0241200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:57635517..57639215) extracted from Lotus japonicus Gifu genome v1.2.
TAGTATAGCAACTGAAAAGAGAAGTGGCTGTTTCGTCGCATTGTGCCTCCAAACCTCACTTTATAAATTGACCACAACCC TCTCTGGTTTTCGTAACTCGACCTTGCCAATTAACCAAAACCGAGCCTGATATTTTTTCCCCACTTCAAAACTTTTTCCT TCTATAAAGTCCAACACCAACCAAAGCAAGAATCCACGTTCTAATAGAACAATCTCTTCTCTACTCTGTTTTTTATTGCT TTTACTCTGTTTCTTCAATACTCCTCAAGTTTTTTATTGCATTGAGGACTTTGAGGTTAAGAAATTGAGAATGACAAAAC CGAATGTGTTGACCCCTGACACTAAGTCATGTATTACCACGCTTATTGGCGTGCCTGAATCCATGGCTGTGCTTGGTGGG ATTTTGGGCATTACACAACACAAAAATGTTGTGAAAAAGTTGGAAGGTGCTAAAGTTAGCACCTGGATTGATTCAATGAG AGCTGCTTCACCAACTAGAGTCAAATCTAATAACTTACCCTCCTCAGAAAACCAAGAAAAATGCTCTTGGATTGTAAGCA TCTGAAATTTACCCTTTTTCTTTGGGATATTTAAGTATCAAAGATTAGCCTGTTATGTTAAAAGCCTCACATTAACTACA CACATACCACCGAGATGTCTTTATCAAGAGTGAAGCAACTCAAATATTCAAACTAGCTTTTTGATTTGCAGCTTTATCAT CCTTCAGCACTGAGCAAGTTTGATGAGATAAAATATAACTCCAAAGGAAAGAAGATTGTGGTTTTTCTTGACTATGATGG AACTCTCTCACCAATTGTTGCTGATCCTGATAAAGCTTTCATGACTAGACAGGTTTTTCTTTTGGTTCTCTATCCCTCTG TTTCATTCATACCCATTGAGTAAAGCTTATATTTTTTGTGAATGAATTTTGTGTAATTAGATGAGAGCGACACTGAAGAA CATAGCAAAACATTTTCCAACTGCTATTGTGACCGGAAGATGCAGAGACAAGGTACATTTTCTCCAAAGCAGAAAAAAAA ATCAATAACAAACCAATTTTTATTCACCGTGATTTTTTATAATGGTGAAATCAAAGGTAAAAAAAATTATGATGAACTAA AATTACAGTGCAGAGTCGACAAATACCAAAGATAAAGAAAATTATTTTGCTTTATGGTGATCTTGGTGACATTGATTTTT CCACTCTGCCTCTAAACACACTCTTAGAAGTAATTATTCATTATAATAATATTTTTTTCTCCTCATTATAATTGATGATG CCTAATGGTTCTTTCTACTCTCTTTTTTCTTTCTTTTAAGGTATTTAACTTTGTAAAATTGGGTGAACTTTACTACGCTG CAAGCCATGGCATGGACATCATGGGACCAACAAAAAGCCGAAATCTTGAGAAAGTAAGAGAGACATGCATTATGTGAATT CATATTTGATGAGAATTTTATCTTTTCTTTTTTGTTCTTTATGCTTAGTTTATTGATTTGTTGCTTTGTTTCAGGGTAAT GATAAAGTAGTGTTGTTCCAACCTGCTAGTCAATTCCTGCCACTGATCGATGAGGTTTGTTCTTATTCAAAACGGGTTAT GATATATTCACACCTCTCTACTCCTTTTCCACCTTCTCTCTCCTTTATTTCTCTTTTCTCTATCAATCAAATCACCTATC ACATCTTTACTTTCTCTCTCCTTTCTTCCTATCCCTCTCTTCCTCCACCTCTCCACACCTCAAAAATAAGGTGTGAAGAA ATAATTACTCATTCAAAACCTTCCCGTCAAACTGGCATTTGGCATCAGAAATAGCATAACATATTAACTTTTATAAAAAA TATAATTTATTTATTTCAGGTGTACAAAATATTGTTAGAAAAAACAAAGTCTGTTCCAGGGGCTAAAGTAGAGAACAACA AATTTTGCTTGTCCGTGCACTTCCGTTGTGTTGACGAAAAGGTAACACAATTTCTTAATAATTGCTGAATTTGTAGATTT ACCTTACCAACCTCACATTGATTGCACAAATTTATCTAACCATTCTTTTGTATTCTCTTTTTGTTCAGAGTTGGGCAGTG TTAGCAGAGAAAGTTAGGTTGGTGCTTAATGAGTACCCACAACTTAGGCTCACTCAAGGGAGAAAAGTGCTAGAGATCAG ACCAACTATCAAATGGGACAAGGGCAAAGCTCTTGAATTCTTGTTAGAGTCGTTAGGTGGGTATATGTTCAGGGTTTTGA TACAATATTGAATACATGCAGTTTCTCTTACATCGTATTTTCATTCCTTTTTTTCTTCTTCTTTTTATTTATTTTTTCAT ATGATATCACTTATCATATGTTCTTTTTTAAGAAATGCACTATAGATAAAATTTGGTCTTTGTGCCTTCTACCTTCTACC TTTTTGCTTGTTGATGTTTTATAACCTCCGCCTTTACAGGTTATAAAATTTGATTGGTTCATTTTTTAATTTGTTCAGTT CGTAGCTCAATTAGTTTGTGCCACCAAGAAGTTTCATTTTTTTTATTTTTCTATCTTCTATTTTTATTTTACTTTGGATG TGAATGAAATTTCCTCTCTTATGTTCATGCAAATATAGCCTAGCTTTGAGACAAATATTATAAGCCATTTGTACTAGTTA ATTAACTACAATACTGTTTGTATATTTAATTTGTAGGGTACGAGAATTCTGATGATGTTTTTCCAATTTACATCGGTGAT GATCGAACCGATGAGGATGCTTTTAAGGTAACAAAATGCCCCAACCTAGCTAGCTAGCTAGTTAGAATATTGCTAATTGC TATTATATAATTCACTTGCACATGTTGACTGACTTATTGACGTTATAAATATAACTAGGTTTTAAGAAGAAGGGATCAAG GAGTTGGAATTCTTGTTTCTAGAGTACCCAAAGAAACCGAAGCTTCCTACTCTTTGCAAGATCCATCAGAGGCAAGCTCA ATATATTCTCATCCAACATATATATGAAATTTAATGAGAAAATGTTATGCTCTTGTTATTAGAGTTTAATTTATTCTACT TTATTTTATAAATTATTTCAACTTGTATTGAGAATATGGGTAATGTATTAACAATATCTTTATGCTTACATGCAGGTTGA GCAATTTTTGAGGTGTTTGGTGGAGTGGGAAAGATCCACTATATCGTGACTCAAAACAAGTTTGTAGAGTCGACCGTAGA ATTTAGATGATCGGTTCTAAGAACTGCAACTACCTTAGAATGTCATCGATGAAGGGATCGAAGCATCCAATTTTACAACT TTATTGTTGAAATGGAAAATAGAATTCCATGATTTTATTTATTAGTTATGTCTGATTTATCAAGAGTACTACGTCGAATA AACAAAACAAAATTATGGATCAGTATGAAATAATTAAATTTTATTCTGCATTATGTTCTCATCTTACACTACAAAAAAAT GCATTTTTAGTGGCATTGATATTGTTAAGTTGTGGCATTTATTAAATGCCCCAAGTGTTATTAGTGGCATTCACCTTTAA GTGCCTCTATTACATGTGTCACAACTGTTTTGTGGCATTTTTTGCTTAAATGCCGGTTTTGTATGCCACAACTGGTATTG ACATCTTTTAAATGCCACGAAATGCACCAACCATTGAATTAGGCTCGAACTGTACTGGCATCCTTTAAGTGCCACAAAAT GCACAATTCAGGTTTTGAC
CDS sequence (LotjaGi1g1v0241200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAAAACCGAATGTGTTGACCCCTGACACTAAGTCATGTATTACCACGCTTATTGGCGTGCCTGAATCCATGGCTGT GCTTGGTGGGATTTTGGGCATTACACAACACAAAAATGTTGTGAAAAAGTTGGAAGGTGCTAAAGTTAGCACCTGGATTG ATTCAATGAGAGCTGCTTCACCAACTAGAGTCAAATCTAATAACTTACCCTCCTCAGAAAACCAAGAAAAATGCTCTTGG ATTCTTTATCATCCTTCAGCACTGAGCAAGTTTGATGAGATAAAATATAACTCCAAAGGAAAGAAGATTGTGGTTTTTCT TGACTATGATGGAACTCTCTCACCAATTGTTGCTGATCCTGATAAAGCTTTCATGACTAGACAGATGAGAGCGACACTGA AGAACATAGCAAAACATTTTCCAACTGCTATTGTGACCGGAAGATGCAGAGACAAGGTATTTAACTTTGTAAAATTGGGT GAACTTTACTACGCTGCAAGCCATGGCATGGACATCATGGGACCAACAAAAAGCCGAAATCTTGAGAAAGGTAATGATAA AGTAGTGTTGTTCCAACCTGCTAGTCAATTCCTGCCACTGATCGATGAGGTGTACAAAATATTGTTAGAAAAAACAAAGT CTGTTCCAGGGGCTAAAGTAGAGAACAACAAATTTTGCTTGTCCGTGCACTTCCGTTGTGTTGACGAAAAGAGTTGGGCA GTGTTAGCAGAGAAAGTTAGGTTGGTGCTTAATGAGTACCCACAACTTAGGCTCACTCAAGGGAGAAAAGTGCTAGAGAT CAGACCAACTATCAAATGGGACAAGGGCAAAGCTCTTGAATTCTTGTTAGAGTCGTTAGGGTACGAGAATTCTGATGATG TTTTTCCAATTTACATCGGTGATGATCGAACCGATGAGGATGCTTTTAAGGTTTTAAGAAGAAGGGATCAAGGAGTTGGA ATTCTTGTTTCTAGAGTACCCAAAGAAACCGAAGCTTCCTACTCTTTGCAAGATCCATCAGAGGCAAGCTCAATATATTC TCATCCAACATATATATGA
Protein sequence (LotjaGi1g1v0241200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKPNVLTPDTKSCITTLIGVPESMAVLGGILGITQHKNVVKKLEGAKVSTWIDSMRAASPTRVKSNNLPSSENQEKCSW ILYHPSALSKFDEIKYNSKGKKIVVFLDYDGTLSPIVADPDKAFMTRQMRATLKNIAKHFPTAIVTGRCRDKVFNFVKLG ELYYAASHGMDIMGPTKSRNLEKGNDKVVLFQPASQFLPLIDEVYKILLEKTKSVPGAKVENNKFCLSVHFRCVDEKSWA VLAEKVRLVLNEYPQLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSDDVFPIYIGDDRTDEDAFKVLRRRDQGVG ILVSRVPKETEASYSLQDPSEASSIYSHPTYI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 344 | 344 | 1.3E-176 | – | |
| PANTHER | 1 | 344 | 344 | 1.3E-176 | – | |
| TIGRFAM | 100 | 343 | 244 | 8.8E-44 | ||
| SUPERFAMILY | 104 | 343 | 240 | 2.46E-45 | ||
| CDD | 104 | 341 | 238 | 9.4244E-64 | – | |
| TIGRFAM | 105 | 313 | 209 | 4.9E-17 | ||
| Gene3D | 105 | 336 | 232 | 6.5E-46 | ||
| Pfam | 106 | 340 | 235 | 3.6E-75 | ||
| Gene3D | 194 | 270 | 77 | 6.5E-46 | – | |
| MobiDBLite | 333 | 352 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi1g1v0241200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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